SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Silkworm GeneModel

previous next from show/14623
No. Name
Length
 JBrowse Chromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1231 BGIBMGA001231-TA
1602bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI0000D55D75 (35%/529)
Cluster: PREDICTED: similar to CG3332-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG3332-PA, isoform A - Tribolium castaneum
1232 BGIBMGA001232-TA
381bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_P62877 (97%/90)
Cluster: RING-box protein 1; n=90; Eukaryota|Rep: RING-box protein 1 - Homo sapiens (Human)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006512 P ubiquitin cycle
GO:0006974 P response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0004842 F ubiquitin-protein ligase activity
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0019005 C SCF ubiquitin ligase complex
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P protein ubiquitination during ubiquitin-dependent protein catabolic process
GO:0016874 F ligase activity
1233 BGIBMGA001233-TA
915bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q7KVQ8 (55%/294)
Cluster: CG1628-PB; n=12; Bilateria|Rep: CG1628-PB - Drosophila melanogaster (Fruit fly)
GO:0005488 F binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0000064 F L-ornithine transmembrane transporter activity
GO:0000066 P mitochondrial ornithine transport
GO:0005215 F transporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
1234 BGIBMGA001234-TA
741bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q8XYU4 (25%/94)
Cluster: Putative uncharacterized protein; n=1; Ralstonia solanacearum|Rep: Putative uncharacterized protein - Ralstonia solanacearum (Pseudomonas solanacearum)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular
GO:0008270 F zinc ion binding
1235 BGIBMGA001235-TA
699bp
 Bomo_Chr24
chromo13/Bm_scaf1
16203812bp
UniRef50_P48596 (90%/207)
Cluster: GTP cyclohydrolase I; n=6; cellular organisms|Rep: GTP cyclohydrolase I - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0003934 F GTP cyclohydrolase I activity
GO:0005737 C cytoplasm
GO:0006727 P ommochrome biosynthetic process
GO:0006729 P tetrahydrobiopterin biosynthetic process
GO:0016787 F hydrolase activity
GO:0019438 P aromatic compound biosynthetic process
GO:0042802 F identical protein binding
GO:0005515 F protein binding
GO:0006559 P L-phenylalanine catabolic process
GO:0006809 P nitric oxide biosynthetic process
GO:0042133 P neurotransmitter metabolic process
GO:0042416 P dopamine biosynthetic process
GO:0006730 P one-carbon compound metabolic process
GO:0046654 P tetrahydrofolate biosynthetic process
1236 BGIBMGA001236-TA
345bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q4V5I9 (63%/114)
Cluster: IP07694p; n=5; Eumetazoa|Rep: IP07694p - Drosophila melanogaster (Fruit fly)
1237 BGIBMGA001237-TA
1281bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9VYD5 (57%/433)
Cluster: CG1673-PA; n=10; Endopterygota|Rep: CG1673-PA - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0004084 F branched-chain-amino-acid transaminase activity
GO:0008152 P metabolic process
GO:0009081 P branched chain family amino acid metabolic process
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008283 P cell proliferation
GO:0008483 F transaminase activity
GO:0008652 P amino acid biosynthetic process
GO:0009082 P branched chain family amino acid biosynthetic process
GO:0016740 F transferase activity
GO:0005739 C mitochondrion
GO:0009083 P branched chain family amino acid catabolic process
GO:0002119 P larval development (sensu Nematoda)
GO:0008150 P biological_process
GO:0009792 P embryonic development ending in birth or egg hatching
1238 BGIBMGA001238-TA
2058bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_P49589 (52%/694)
Cluster: Cysteinyl-tRNA synthetase, cytoplasmic; n=62; Eumetazoa|Rep: Cysteinyl-tRNA synthetase, cytoplasmic - Homo sapiens (Human)
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005625 C soluble fraction
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0006418 P tRNA aminoacylation for protein translation
GO:0005840 C ribosome
GO:0006534 P cysteine metabolic process
GO:0042254 P ribosome biogenesis and assembly
1239 BGIBMGA001239-TA
855bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q2F6A5 (99%/282)
Cluster: Elongation protein 4-like protein; n=1; Bombyx mori|Rep: Elongation protein 4-like protein - Bombyx mori (Silk moth)
GO:0004406 F H3/H4 histone acetyltransferase activity
GO:0016944 F RNA polymerase II transcription elongation factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006350 P transcription
GO:0006355 P regulation of transcription, DNA-dependent
GO:0006357 P regulation of transcription from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008607 F phosphorylase kinase regulator activity
GO:0016591 C DNA-directed RNA polymerase II, holoenzyme
GO:0033588 C Elongator holoenzyme complex
1240 BGIBMGA001240-TA
909bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q17D34 (45%/256)
Cluster: Tetraspanin, putative; n=1; Aedes aegypti|Rep: Tetraspanin, putative - Aedes aegypti (Yellowfever mosquito)
GO:0016020 C membrane
GO:0016021 C integral to membrane
1241 BGIBMGA001241-TA
1977bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_A1Z6L9 (63%/649)
Cluster: CG3152-PA; n=6; Endopterygota|Rep: CG3152-PA - Drosophila melanogaster (Fruit fly)
GO:0005524 F ATP binding
GO:0006457 P protein folding
GO:0051082 F unfolded protein binding
GO:0000166 F nucleotide binding
GO:0005164 F tumor necrosis factor receptor binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
1242 BGIBMGA001242-TA
1932bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q16WF1 (44%/568)
Cluster: Neurotactin; n=2; Culicidae|Rep: Neurotactin - Aedes aegypti (Yellowfever mosquito)
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007413 P axonal fasciculation
GO:0007417 P central nervous system development
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016323 C basolateral plasma membrane
1243 BGIBMGA001243-TA
531bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q4GXT1 (75%/150)
Cluster: Ribosomal protein S10e; n=3; Fungi/Metazoa group|Rep: Ribosomal protein S10e - Agriotes lineatus (Lined click beetle)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit (sensu Eukaryota)
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1244 BGIBMGA001244-TA
1482bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI0000D5791D (36%/472)
Cluster: PREDICTED: similar to CG15797-PA; n=2; Endopterygota|Rep: PREDICTED: similar to CG15797-PA - Tribolium castaneum
GO:0001965 F G-protein alpha-subunit binding
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007163 P establishment and/or maintenance of cell polarity
GO:0007275 P multicellular organismal development
GO:0007369 P gastrulation
GO:0008105 P asymmetric protein localization
GO:0008356 P asymmetric cell division
GO:0010004 P gastrulation involving germ band extension
GO:0040001 P establishment of mitotic spindle localization
GO:0050821 P protein stabilization
GO:0055057 P neuroblast division
1245 BGIBMGA001245-TA
1626bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q170L4 (41%/508)
Cluster: F-spondin; n=3; Culicidae|Rep: F-spondin - Aedes aegypti (Yellowfever mosquito)
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0007155 P cell adhesion
GO:0007275 P multicellular organismal development
1246 BGIBMGA001246-TA
741bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q170L4 (27%/172)
Cluster: F-spondin; n=3; Culicidae|Rep: F-spondin - Aedes aegypti (Yellowfever mosquito)
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0007155 P cell adhesion
GO:0007275 P multicellular organismal development
GO:0002119 P larval development (sensu Nematoda)
GO:0007626 P locomotory behavior
GO:0009792 P embryonic development ending in birth or egg hatching
GO:0040007 P growth
1247 BGIBMGA001247-TA
1473bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q4QBL5 (22%/342)
Cluster: Putative uncharacterized protein; n=3; Leishmania|Rep: Putative uncharacterized protein - Leishmania major
1248 BGIBMGA001248-TA
2097bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_A2DGN0 (22%/457)
Cluster: Viral A-type inclusion protein, putative; n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion protein, putative - Trichomonas vaginalis G3
GO:0005515 F protein binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
1249 BGIBMGA001249-TA
963bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q7JVH0 (69%/204)
Cluster: LD32459p; n=9; Coelomata|Rep: LD32459p - Drosophila melanogaster (Fruit fly)
1250 BGIBMGA001250-TA
906bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9VXM1 (55%/107)
Cluster: LD22957p; n=3; Drosophila melanogaster|Rep: LD22957p - Drosophila melanogaster (Fruit fly)
GO:0000074 P regulation of progression through cell cycle
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007005 P mitochondrion organization and biogenesis
GO:0007049 P cell cycle
GO:0007259 P JAK-STAT cascade
GO:0008283 P cell proliferation
GO:0009987 P cellular process
GO:0016049 P cell growth
GO:0016538 F cyclin-dependent protein kinase regulator activity
GO:0030307 P positive regulation of cell growth
GO:0051301 P cell division
GO:0005737 C cytoplasm
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0000320 P re-entry into mitotic cell cycle
GO:0004672 F protein kinase activity
GO:0005575 C cellular_component
GO:0005622 C intracellular
GO:0005829 C cytosol
GO:0006468 P protein amino acid phosphorylation
GO:0016301 F kinase activity
GO:0030968 P unfolded protein response
GO:0045444 P fat cell differentiation
1251 BGIBMGA001251-TA
525bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_P30281 (38%/162)
Cluster: G1/S-specific cyclin-D3; n=34; Tetrapoda|Rep: G1/S-specific cyclin-D3 - Homo sapiens (Human)
GO:0000074 P regulation of progression through cell cycle
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0051301 P cell division
GO:0007005 P mitochondrion organization and biogenesis
GO:0007259 P JAK-STAT cascade
GO:0008283 P cell proliferation
GO:0009987 P cellular process
GO:0016049 P cell growth
GO:0016538 F cyclin-dependent protein kinase regulator activity
GO:0030307 P positive regulation of cell growth
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0000320 P re-entry into mitotic cell cycle
GO:0004672 F protein kinase activity
GO:0005575 C cellular_component
GO:0005622 C intracellular
GO:0005829 C cytosol
GO:0006468 P protein amino acid phosphorylation
GO:0016301 F kinase activity
GO:0030968 P unfolded protein response
GO:0045444 P fat cell differentiation
1252 BGIBMGA001252-TA
849bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9VMX0 (50%/292)
Cluster: 39S ribosomal protein L28, mitochondrial precursor; n=4; Diptera|Rep: 39S ribosomal protein L28, mitochondrial precursor - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0045182 F translation regulator activity
GO:0003700 F transcription factor activity
GO:0005634 C nucleus
GO:0005761 C mitochondrial ribosome
GO:0045449 P regulation of transcription
1253 BGIBMGA001253-TA
384bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI0000DB6B82 (58%/29)
Cluster: PREDICTED: similar to CG7453-PB, isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar to CG7453-PB, isoform B - Apis mellifera
1254 BGIBMGA001254-TA
2118bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI00015B5E7D (44%/373)
Cluster: PREDICTED: similar to adenylate cyclase type ix; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to adenylate cyclase type ix - Nasonia vitripennis
1255 BGIBMGA001255-TA
1824bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI0000DB755E (53%/613)
Cluster: PREDICTED: similar to Adenylyl cyclase 35C CG9210-PA, isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to Adenylyl cyclase 35C CG9210-PA, isoform A - Apis mellifera
GO:0007242 P intracellular signaling cascade
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
1256 BGIBMGA001256-TA
5331bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q16S43 (39%/1769)
Cluster: Low-density lipoprotein receptor; n=1; Aedes aegypti|Rep: Low-density lipoprotein receptor - Aedes aegypti (Yellowfever mosquito)
GO:0004872 F receptor activity
GO:0005509 F calcium ion binding
GO:0016020 C membrane
1257 BGIBMGA001257-TA
1419bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9VIP2 (45%/472)
Cluster: CG10721-PA; n=7; Endopterygota|Rep: CG10721-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0006118 P electron transport
GO:0016491 F oxidoreductase activity
GO:0002119 P larval development (sensu Nematoda)
GO:0008150 P biological_process
1258 BGIBMGA001258-TA
660bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_P51809 (54%/218)
Cluster: Synaptobrevin-like protein 1; n=42; Eumetazoa|Rep: Synaptobrevin-like protein 1 - Homo sapiens (Human)
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral to membrane
GO:0016192 P vesicle-mediated transport
1259 BGIBMGA001259-TA
1761bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI00015B5892 (71%/464)
Cluster: PREDICTED: similar to otopetrin; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to otopetrin - Nasonia vitripennis
1260 BGIBMGA001260-TA
333bp
 Bomo_Chr13
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9W4A5 (52%/70)
Cluster: CG17761-PA; n=3; Sophophora|Rep: CG17761-PA - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0006355 P regulation of transcription, DNA-dependent
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
previous next from show/14623

- SilkBase 1999-2023 -