SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/09/19
 
previous next from show/740
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
31 psV30125.Seq
682bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q2F5N3 (77%/119)
Cluster: Progesterone membrane binding protein; n=1; Bombyx mori|Rep: Progesterone membrane binding protein - Bombyx mori (Silk moth)
GO:0020037 F heme binding
GO:0046914 F transition metal ion binding
32 psV30131.Seq
482bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (84%/84)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
33 psV30132.Seq
689bp
chromo23/Bm_scaf12
6701349bp
UniRef50_Q5AMQ3 (30%/53)
Cluster: Putative uncharacterized protein RGA2; n=1; Candida albicans|Rep: Putative uncharacterized protein RGA2 - Candida albicans (Yeast)
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005515 F protein binding
34 psV30133.Seq
693bp
chromo19/Bm_scaf36
4352778bp
UniRef50_Q187Y3 (41%/39)
Cluster: Putative membrane protein; n=2; Clostridium difficile|Rep: Putative membrane protein - Clostridium difficile (strain 630)
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016020 C membrane
35 psV30134.Seq
882bp
chromo23/Bm_scaf22
5301712bp
UniRef50_Q8NST2 (35%/64)
Cluster: Putative uncharacterized protein Cgl0585; n=2; Corynebacterium glutamicum|Rep: Putative uncharacterized protein Cgl0585 - Corynebacterium glutamicum (Brevibacterium flavum)
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
36 psV30135.Seq
856bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q96483 (97%/85)
Cluster: Actin-51; n=584; Eukaryota|Rep: Actin-51 - Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
37 psV30136.Seq
884bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q8GEG0 (59%/42)
Cluster: Putative uncharacterized protein; n=1; Erwinia amylovora|Rep: Putative uncharacterized protein - Erwinia amylovora (Fire blight bacteria)
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005515 F protein binding
GO:0005618 C cell wall
GO:0005975 P carbohydrate metabolic process
GO:0003824 F catalytic activity
GO:0004565 F beta-galactosidase activity
GO:0008152 P metabolic process
GO:0009341 C beta-galactosidase complex
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
GO:0043169 F cation binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005622 C intracellular anatomical structure
38 psV30137.Seq
875bp
chromo16/Bm_scaf124
657554bp
UniRef50_Q4TEL0 (61%/109)
Cluster: Chromosome undetermined SCAF5294, whole genome shotgun sequence; n=2; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF5294, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004815 F aspartate-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006422 P aspartyl-tRNA aminoacylation
GO:0004816 F asparagine-tRNA ligase activity
GO:0005515 F protein binding
GO:0005625 C obsolete soluble fraction
GO:0006421 P asparaginyl-tRNA aminoacylation
GO:0016874 F ligase activity
39 psV30139.Seq
697bp
chromo20/Bm_scaf37
4206046bp
UniRef50_UPI0000DB7BB2 (57%/111)
Cluster: PREDICTED: similar to CG8494-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG8494-PA - Apis mellifera
GO:0004221 F obsolete ubiquitin thiolesterase activity
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006512 P obsolete ubiquitin cycle
GO:0008270 F zinc ion binding
40 psV30141.Seq
897bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q14254 (46%/177)
Cluster: Flotillin-2; n=66; Eumetazoa|Rep: Flotillin-2 - Homo sapiens (Human)
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0008544 P epidermis development
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016600 C flotillin complex
GO:0045121 C membrane raft
41 psV30142.Seq
600bp
unknown/Bm_scaf196
110978bp
UniRef50_Q758T8 (35%/53)
Cluster: SWR1-complex protein 3; n=1; Eremothecium gossypii|Rep: SWR1-complex protein 3 - Ashbya gossypii (Yeast) (Eremothecium gossypii)
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
42 psV30146.Seq
330bp
unknown/Bm_scaf264
56929bp
(no hit)
43 psV30147.Seq
878bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q05639 (68%/195)
Cluster: Elongation factor 1-alpha 2; n=8397; root|Rep: Elongation factor 1-alpha 2 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
44 psV30148.Seq
812bp
chromo2/Bm_scaf118
704489bp
UniRef50_Q8T5I1 (34%/82)
Cluster: Transcription factor; n=3; Culicidae|Rep: Transcription factor - Anopheles gambiae (African malaria mosquito)
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0045449 P regulation of transcription, DNA-templated
GO:0004872 F signaling receptor activity
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0019867 C outer membrane
GO:0009847 P spore germination
45 psV30149.Seq
867bp
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI0000D577BE (53%/64)
Cluster: PREDICTED: similar to CG13035-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG13035-PA, isoform A - Tribolium castaneum
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016491 F oxidoreductase activity
GO:0042773 P ATP synthesis coupled electron transport
46 psV30150.Seq
821bp
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI0000D577BE (48%/64)
Cluster: PREDICTED: similar to CG13035-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG13035-PA, isoform A - Tribolium castaneum
GO:0016787 F hydrolase activity
47 psV30151.Seq
892bp
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI0000D577BE (53%/64)
Cluster: PREDICTED: similar to CG13035-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG13035-PA, isoform A - Tribolium castaneum
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016491 F oxidoreductase activity
GO:0042773 P ATP synthesis coupled electron transport
48 psV30152.Seq
877bp
chromo12/Bm_scaf109
991363bp
UniRef50_UPI00015B5529 (48%/82)
Cluster: PREDICTED: similar to AT19737p; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to AT19737p - Nasonia vitripennis
49 psV30153.Seq
864bp
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI0000D55AA9 (73%/86)
Cluster: PREDICTED: similar to CG2101-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG2101-PA - Tribolium castaneum
GO:0005515 F protein binding
50 psV30155.Seq
883bp
unknown/
0bp
UniRef50_Q8GEG0 (100%/45)
Cluster: Putative uncharacterized protein; n=1; Erwinia amylovora|Rep: Putative uncharacterized protein - Erwinia amylovora (Fire blight bacteria)
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005515 F protein binding
GO:0005618 C cell wall
GO:0005975 P carbohydrate metabolic process
GO:0003824 F catalytic activity
GO:0004565 F beta-galactosidase activity
GO:0008152 P metabolic process
GO:0009341 C beta-galactosidase complex
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
GO:0043169 F cation binding
51 psV30156.Seq
961bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P15880 (76%/108)
Cluster: 40S ribosomal protein S2; n=284; Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005829 C cytosol
52 psV30158.Seq
813bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q0N2R6 (56%/174)
Cluster: Signal recognition particle receptor beta subunit; n=2; Endopterygota|Rep: Signal recognition particle receptor beta subunit - Bombyx mori (Silk moth)
GO:0004872 F signaling receptor activity
53 psV30159.Seq
712bp
chromo19/Bm_scaf36
4352778bp
UniRef50_A0BHF0 (31%/41)
Cluster: Chromosome undetermined scaffold_108, whole genome shotgun sequence; n=2; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_108, whole genome shotgun sequence - Paramecium tetraurelia
GO:0004222 F metalloendopeptidase activity
GO:0005515 F protein binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016020 C membrane
54 psV30160.Seq
904bp
chromo20/Bm_scaf79
1594848bp
UniRef50_UPI0000E4A8D7 (56%/128)
Cluster: PREDICTED: similar to Pck1 protein; n=3; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to Pck1 protein - Strongylocentrotus purpuratus
55 psV30161.Seq
888bp
chromo8/Bm_scaf161
275540bp
UniRef50_Q5QBM3 (67%/82)
Cluster: O-phosphoserine phosphatase; n=1; Culicoides sonorensis|Rep: O-phosphoserine phosphatase - Culicoides sonorensis
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0004647 F L-phosphoserine phosphatase activity
GO:0006564 P L-serine biosynthetic process
GO:0016791 F phosphatase activity
GO:0000287 F magnesium ion binding
GO:0005515 F protein binding
GO:0006563 P L-serine metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016787 F hydrolase activity
56 psV30162.Seq
465bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9GP16 (98%/67)
Cluster: 60S ribosomal protein L31; n=27; Coelomata|Rep: 60S ribosomal protein L31 - Heliothis virescens (Noctuid moth) (Owlet moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
57 psV30163.Seq
824bp
chromo1/Bm_scaf8
8002931bp
UniRef50_A2A246 (95%/81)
Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-box protein - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0006355 P regulation of transcription, DNA-templated
58 psV30164.Seq
888bp
chromo19/Bm_scaf36
4352778bp
UniRef50_P55072 (44%/224)
Cluster: Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169; Eukaryota|Rep: Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005792 C obsolete microsome
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006512 P obsolete ubiquitin cycle
GO:0006810 P transport
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008289 F lipid binding
GO:0016567 P protein ubiquitination
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0030970 P retrograde protein transport, ER to cytosol
GO:0042981 P regulation of apoptotic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045184 P establishment of protein localization
59 psV30165.Seq
897bp
unknown/Bm_scaf192
108803bp
UniRef50_Q2F5X7 (98%/76)
Cluster: Nuclear Y/CCAAT-box binding factor C subunit NF/YC; n=1; Bombyx mori|Rep: Nuclear Y/CCAAT-box binding factor C subunit NF/YC - Bombyx mori (Silk moth)
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0043565 F sequence-specific DNA binding
60 psV30166.Seq
892bp
chromo11/Bm_scaf16
6248677bp
UniRef50_P07237 (58%/87)
Cluster: Protein disulfide-isomerase precursor; n=84; Eukaryota|Rep: Protein disulfide-isomerase precursor - Homo sapiens (Human)
GO:0003756 F protein disulfide isomerase activity
GO:0004656 F procollagen-proline 4-dioxygenase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005792 C obsolete microsome
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016853 F isomerase activity
GO:0018401 P peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0045454 P cell redox homeostasis
previous next from show/740

- SilkBase 1999-2022 -