SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/3812
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
631 ceN-0851
583bp
unknown/Bm_scaf6511_contig51721
878bp
UniRef50_Q9XXW0 (67%/186)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0005575 C cellular_component
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
632 ceN-0852
748bp
chromo18/Bm_scaf2
11281751bp
UniRef50_A0MNZ0 (78%/28)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0003824 F catalytic activity
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
633 ceN-0853
670bp
chromo19/Bm_scaf60
2449460bp
UniRef50_A0V6T7 (42%/59)
Cluster: Amino acid adenylation domain; n=2; Comamonadaceae|Rep: Amino acid adenylation domain - Delftia acidovorans SPH-1
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0048037 F obsolete cofactor binding
634 ceN-0855
763bp
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B46F9 (70%/202)
Cluster: PREDICTED: similar to importin beta-1; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to importin beta-1 - Nasonia vitripennis
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006610 P ribosomal protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008139 F nuclear localization sequence binding
GO:0008270 F zinc ion binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
635 ceN-0856
639bp
chromo23/Bm_scaf12
6701349bp
UniRef50_Q14VH3 (58%/65)
Cluster: MAX dimerization protein; n=2; Apocrita|Rep: MAX dimerization protein - Apis mellifera (Honeybee)
GO:0005634 C nucleus
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
636 ceN-0857
773bp
chromo27/Bm_scaf97
1382440bp
UniRef50_Q7Z2R3 (35%/40)
Cluster: MST148 protein; n=1; Homo sapiens|Rep: MST148 protein - Homo sapiens (Human)
GO:0000155 F phosphorelay sensor kinase activity
GO:0000160 P phosphorelay signal transduction system
GO:0004673 F protein histidine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
637 ceN-0858
669bp
chromo16/Bm_scaf4
9119588bp
UniRef50_A1XDB3 (52%/36)
Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0003824 F catalytic activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0006508 P proteolysis
638 ceN-0859
660bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q9VNL0 (90%/187)
Cluster: CG10287-PA; n=10; Endopterygota|Rep: CG10287-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0006030 P chitin metabolic process
GO:0008061 F chitin binding
639 ceN-0860
326bp
chromo25/Bm_scaf46
3255295bp
UniRef50_Q8T118 (48%/80)
Cluster: Biliverdin binding protein-I precursor; n=1; Samia cynthia ricini|Rep: Biliverdin binding protein-I precursor - Samia cynthia ricini (Indian eri silkmoth)
GO:0005215 F transporter activity
GO:0005488 F binding
GO:0006810 P transport
GO:0018298 P protein-chromophore linkage
GO:0031409 F pigment binding
GO:0004252 F serine-type endopeptidase activity
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0030567 F obsolete thrombin activator activity
640 ceN-0861
662bp
chromo11/Bm_scaf16
6248677bp
UniRef50_UPI0000D55B64 (29%/124)
Cluster: PREDICTED: similar to transmembrane channel-like 7; n=1; Tribolium castaneum|Rep: PREDICTED: similar to transmembrane channel-like 7 - Tribolium castaneum
641 ceN-0862
673bp
chromo9/Bm_scaf87
1493941bp
(no hit)
642 ceN-0864
746bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (93%/204)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
643 ceN-0865
362bp
unknown/Bm_scaf26999_contig72209
623bp
UniRef50_Q9BPP9 (67%/67)
Cluster: Gag-like protein; n=2; Bombyx mori|Rep: Gag-like protein - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
644 ceN-0866
391bp
chromo26/Bm_scaf34
4438494bp
UniRef50_Q7PNF4 (42%/38)
Cluster: ENSANGP00000007015; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000007015 - Anopheles gambiae str. PEST
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0008270 F zinc ion binding
GO:0030246 F carbohydrate binding
GO:0006508 P proteolysis
GO:0030693 F obsolete caspase activity
645 ceN-0868
560bp
chromo1/Bm_scaf8
8002931bp
(no hit)
646 ceN-0869
629bp
chromo18/Bm_scaf2
11281751bp
UniRef50_Q6UV17 (95%/42)
Cluster: Endonuclease and reverse transcriptase-like protein; n=25; Arthropoda|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
647 ceN-0870
553bp
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI00015B43ED (46%/172)
Cluster: PREDICTED: similar to BEL12_AG transposon polyprotein; n=2; Nasonia vitripennis|Rep: PREDICTED: similar to BEL12_AG transposon polyprotein - Nasonia vitripennis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0015074 P DNA integration
648 ceN-0873
708bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q9VW32 (58%/129)
Cluster: CG8756-PA, isoform A; n=26; Endopterygota|Rep: CG8756-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0004099 F chitin deacetylase activity
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006030 P chitin metabolic process
GO:0007424 P open tracheal system development
GO:0008061 F chitin binding
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0035159 P regulation of tube length, open tracheal system
GO:0003824 F catalytic activity
GO:0004872 F signaling receptor activity
GO:0005041 F low-density lipoprotein particle receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005624 C obsolete membrane fraction
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050750 F low-density lipoprotein particle receptor binding
649 ceN-0874
486bp
unknown/Bm_scaf791
9086bp
UniRef50_Q6CQE6 (50%/89)
Cluster: Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of Kluyveromyces lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of Kluyveromyces lactis - Kluyveromyces lactis (Yeast) (Candida sphaerica)
GO:0016491 F oxidoreductase activity
GO:0050381 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
650 ceN-0875
685bp
chromo6/Bm_scaf11
6993210bp
UniRef50_Q9VFX9 (55%/36)
Cluster: CG11686-PA; n=3; Endopterygota|Rep: CG11686-PA - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0006139 P nucleobase-containing compound metabolic process
GO:0008408 F 3'-5' exonuclease activity
651 ceN-0876
788bp
chromo10/Bm_scaf10
7317751bp
UniRef50_UPI0000D56EFB (52%/180)
Cluster: PREDICTED: similar to G-protein coupled receptor 143 (Ocular albinism type 1 protein); n=1; Tribolium castaneum|Rep: PREDICTED: similar to G-protein coupled receptor 143 (Ocular albinism type 1 protein) - Tribolium castaneum
GO:0004871 F obsolete signal transducer activity
GO:0004872 F signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005624 C obsolete membrane fraction
GO:0005737 C cytoplasm
GO:0006726 P eye pigment biosynthetic process
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0007154 P cell communication
GO:0007218 P neuropeptide signaling pathway
652 ceN-0877
650bp
chromo11/Bm_scaf16
6248677bp
UniRef50_P19109 (57%/123)
Cluster: ATP-dependent RNA helicase p62; n=9; Eukaryota|Rep: ATP-dependent RNA helicase p62 - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0008026 F helicase activity
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0019730 P antimicrobial humoral response
GO:0031047 P gene silencing by RNA
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0006364 P rRNA processing
GO:0042254 P ribosome biogenesis
GO:0005737 C cytoplasm
653 ceN-0879
627bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q8IIP5 (28%/74)
Cluster: Putative uncharacterized protein; n=5; Plasmodium|Rep: Putative uncharacterized protein - Plasmodium falciparum (isolate 3D7)
GO:0005488 F binding
GO:0006457 P protein folding
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006030 P chitin metabolic process
GO:0006032 P chitin catabolic process
GO:0008061 F chitin binding
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0043169 F cation binding
654 ceN-0880
648bp
chromo6/Bm_scaf111
965032bp
UniRef50_Q08473 (71%/193)
Cluster: RNA-binding protein squid; n=22; Endopterygota|Rep: RNA-binding protein squid - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0007293 P germarium-derived egg chamber formation
GO:0007297 P ovarian follicle cell migration
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0008298 P intracellular mRNA localization
GO:0009953 P dorsal/ventral pattern formation
GO:0017148 P negative regulation of translation
GO:0019094 P pole plasm mRNA localization
GO:0030529 C ribonucleoprotein complex
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0035062 C omega speckle
GO:0000781 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005694 C chromosome
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006401 P RNA catabolic process
GO:0008150 P biological_process
GO:0016563 F obsolete transcription activator activity
GO:0030530 C obsolete heterogeneous nuclear ribonucleoprotein complex
655 ceN-0882
683bp
chromo4/Bm_scaf13
6731059bp
UniRef50_O75506 (72%/59)
Cluster: Heat shock factor-binding protein 1; n=28; Euteleostomi|Rep: Heat shock factor-binding protein 1 - Homo sapiens (Human)
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
656 ceN-0884
711bp
unknown/Bm_scaf2543_contig47608
1622bp
UniRef50_Q5MGN8 (66%/176)
Cluster: Heat shock protein 3; n=4; Ditrysia|Rep: Heat shock protein 3 - Lonomia obliqua (Moth)
GO:0006950 P response to stress
GO:0007275 P multicellular organism development
GO:0042802 F identical protein binding
657 ceN-0885
710bp
unknown/Bm_scaf203
100807bp
UniRef50_Q9VYV4 (63%/213)
Cluster: CG2446-PA, isoform A; n=8; Endopterygota|Rep: CG2446-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
658 ceN-0886
702bp
chromo24/Bm_scaf43
3469235bp
UniRef50_Q9W555 (74%/179)
Cluster: CG14813-PA; n=5; Diptera|Rep: CG14813-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0016192 P vesicle-mediated transport
GO:0030131 C clathrin adaptor complex
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030126 C COPI vesicle coat
659 ceN-0889
589bp
chromo1/Bm_scaf26
4824072bp
UniRef50_A7K8M4 (32%/82)
Cluster: Putative uncharacterized protein z264R; n=1; Chlorella virus ATCV-1|Rep: Putative uncharacterized protein z264R - Chlorella virus ATCV-1
GO:0003723 F RNA binding
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005634 C nucleus
GO:0003725 F double-stranded RNA binding
GO:0005622 C intracellular anatomical structure
GO:0008033 P tRNA processing
GO:0016491 F oxidoreductase activity
GO:0050660 F flavin adenine dinucleotide binding
660 ceN-0890
687bp
unknown/
0bp
UniRef50_P24646 (74%/146)
Cluster: Polyhedrin; n=212; root|Rep: Polyhedrin - Spodoptera littoralis nuclear polyhedrosis virus (SlNPV)
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
previous next from show/3812

- SilkBase 1999-2023 -