SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/3812
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
3421 ceN-5927
724bp
unknown/Bm_scaf40668_contig85878
490bp
UniRef50_UPI0000F1F918 (33%/105)
Cluster: PREDICTED: hypothetical protein; n=1; Danio rerio|Rep: PREDICTED: hypothetical protein - Danio rerio
3422 ceN-5928
573bp
chromo17/Bm_scaf21
5628829bp
UniRef50_Q6UV17 (96%/92)
Cluster: Endonuclease and reverse transcriptase-like protein; n=25; Arthropoda|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0004601 F peroxidase activity
GO:0005515 F protein binding
GO:0006118 P obsolete electron transport
GO:0006979 P response to oxidative stress
GO:0020037 F heme binding
GO:0040035 P hermaphrodite genitalia development
3423 ceN-5931
672bp
chromo11/Bm_scaf35
4373199bp
UniRef50_P36578 (65%/202)
Cluster: 60S ribosomal protein L4; n=70; Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005811 C lipid droplet
3424 ceN-5932
693bp
unknown/Bm_scaf157
326066bp
UniRef50_Q7RP96 (29%/48)
Cluster: Putative uncharacterized protein PY01563; n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein PY01563 - Plasmodium yoelii yoelii
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0005524 F ATP binding
GO:0006457 P protein folding
GO:0051082 F unfolded protein binding
3425 ceN-5933
772bp
chromo13/Bm_scaf1
16203812bp
UniRef50_A1XDB3 (70%/17)
Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
3426 ceN-5934
685bp
chromo22/Bm_scaf18
5904300bp
UniRef50_Q9BPR7 (70%/224)
Cluster: Cuticle protein; n=4; Bombyx mori|Rep: Cuticle protein - Bombyx mori (Silk moth)
GO:0042302 F structural constituent of cuticle
GO:0005515 F protein binding
3427 ceN-5935
814bp
chromo17/Bm_scaf21
5628829bp
UniRef50_Q4Z0I0 (27%/119)
Cluster: Putative uncharacterized protein; n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein - Plasmodium berghei
GO:0009507 C chloroplast
3428 ceN-5937
794bp
chromo7/Bm_scaf15
6423983bp
UniRef50_A1XDB3 (60%/45)
Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
3429 ceN-5938
766bp
unknown/Bm_scaf18861_contig64071
674bp
UniRef50_Q6UV17 (99%/200)
Cluster: Endonuclease and reverse transcriptase-like protein; n=25; Arthropoda|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
3430 ceN-5940
569bp
chromo10/Bm_scaf70
1945803bp
UniRef50_Q49549 (53%/26)
Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 - Mycoplasma hyorhinis
3431 ceN-5941
762bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q6CUH7 (30%/92)
Cluster: Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140 of Kluyveromyces lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140 of Kluyveromyces lactis - Kluyveromyces lactis (Yeast) (Candida sphaerica)
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006950 P response to stress
GO:0006986 P response to unfolded protein
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0051056 P regulation of small GTPase mediated signal transduction
3432 ceN-5942
711bp
unknown/Bm_scaf13308_contig58518
718bp
UniRef50_Q9XXW0 (70%/185)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
3433 ceN-5943
725bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q5Z6S1 (48%/39)
Cluster: Putative uncharacterized protein OSJNBa0037N01.14; n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein OSJNBa0037N01.14 - Oryza sativa subsp. japonica (Rice)
3434 ceN-5944
619bp
chromo22/Bm_scaf61
2256882bp
UniRef50_P41042 (79%/185)
Cluster: 40S ribosomal protein S4; n=38; Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0000074 P regulation of cell cycle
GO:0005843 C cytosolic small ribosomal subunit
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0005737 C cytoplasm
3435 ceN-5945
544bp
unknown/Bm_scaf791
9086bp
UniRef50_Q0WWS3 (55%/27)
Cluster: Putative uncharacterized protein; n=1; Arabidopsis thaliana|Rep: Putative uncharacterized protein - Arabidopsis thaliana (Mouse-ear cress)
GO:0000155 F phosphorelay sensor kinase activity
GO:0000156 F phosphorelay response regulator activity
GO:0000160 P phosphorelay signal transduction system
GO:0004673 F protein histidine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
3436 ceN-5946
769bp
chromo24/Bm_scaf43
3469235bp
UniRef50_Q9W261 (41%/80)
Cluster: RNA polymerase-associated protein Rtf1; n=4; Coelomata|Rep: RNA polymerase-associated protein Rtf1 - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0045747 P positive regulation of Notch signaling pathway
GO:0051568 P histone H3-K4 methylation
GO:0051571 P positive regulation of histone H3-K4 methylation
3437 ceN-5947
728bp
chromo22/Bm_scaf18
5904300bp
UniRef50_A1XDB3 (85%/14)
Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0003824 F catalytic activity
GO:0004114 F 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0007165 P signal transduction
GO:0016787 F hydrolase activity
3438 ceN-5949
639bp
chromo19/Bm_scaf36
4352778bp
UniRef50_Q7PPI8 (64%/152)
Cluster: ENSANGP00000022232; n=3; Endopterygota|Rep: ENSANGP00000022232 - Anopheles gambiae str. PEST
GO:0000166 F nucleotide binding
GO:0005952 C cAMP-dependent protein kinase complex
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007411 P axon guidance
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0030552 F cAMP binding
GO:0045475 P locomotor rhythm
GO:0048148 P behavioral response to cocaine
GO:0048149 P behavioral response to ethanol
GO:0048511 P rhythmic process
3439 ceN-5950
337bp
chromo3/Bm_scaf63
2158332bp
UniRef50_Q4Z0C1 (57%/26)
Cluster: Putative uncharacterized protein; n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein - Plasmodium berghei
GO:0009507 C chloroplast
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
3440 ceN-5951
734bp
chromo23/Bm_scaf83
1589841bp
UniRef50_UPI0000D55D38 (37%/58)
Cluster: PREDICTED: similar to CG32149-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG32149-PA, isoform A - Tribolium castaneum
GO:0004518 F nuclease activity
GO:0006281 P DNA repair
3441 ceN-5953
510bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q0SD77 (34%/46)
Cluster: Probable long-chain-fatty-acid--CoA ligase; n=1; Rhodococcus sp. RHA1|Rep: Probable long-chain-fatty-acid--CoA ligase - Rhodococcus sp. (strain RHA1)
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
3442 ceN-5954
331bp
chromo25/Bm_scaf32
4385969bp
UniRef50_Q8SZF0 (40%/99)
Cluster: RE02747p; n=4; Sophophora|Rep: RE02747p - Drosophila melanogaster (Fruit fly)
GO:0016020 C membrane
GO:0030001 P metal ion transport
GO:0046873 F metal ion transmembrane transporter activity
3443 ceN-5955
458bp
chromo11/Bm_scaf16
6248677bp
UniRef50_A4LWA7 (42%/52)
Cluster: Polysaccharide biosynthesis protein, putative; n=3; Desulfuromonadales|Rep: Polysaccharide biosynthesis protein, putative - Geobacter bemidjiensis Bem
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0016740 F transferase activity
GO:0003824 F catalytic activity
GO:0003908 F methylated-DNA-[protein]-cysteine S-methyltransferase activity
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006307 P DNA dealkylation involved in DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008168 F methyltransferase activity
3444 ceN-5957
770bp
chromo25/Bm_scaf89
1495961bp
UniRef50_Q1DPT2 (27%/62)
Cluster: Predicted protein; n=1; Coccidioides immitis|Rep: Predicted protein - Coccidioides immitis
3445 ceN-5958
729bp
chromo26/Bm_scaf25
4930657bp
UniRef50_A1XDB3 (80%/15)
Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005488 F binding
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
3446 ceN-5959
750bp
chromo8/Bm_scaf19
6098939bp
UniRef50_A0FDQ8 (82%/216)
Cluster: Putative uncharacterized protein; n=1; Bombyx mori|Rep: Putative uncharacterized protein - Bombyx mori (Silk moth)
GO:0005618 C cell wall
GO:0009986 C cell surface
3447 ceN-5960
733bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5W7N6 (97%/235)
Cluster: Cytosine-specific methyltransferase; n=1; Bombyx mori|Rep: Cytosine-specific methyltransferase - Bombyx mori (Silk moth)
GO:0003677 F DNA binding
GO:0003886 F DNA (cytosine-5-)-methyltransferase activity
GO:0006306 P DNA methylation
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000792 C heterochromatin
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016458 P obsolete gene silencing
GO:0016564 F obsolete transcription repressor activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3448 ceN-5961
541bp
chromo20/Bm_scaf96
1469819bp
UniRef50_P55828 (76%/115)
Cluster: 40S ribosomal protein S20; n=28; Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0005829 C cytosol
3449 ceN-5962
506bp
chromo3/Bm_scaf55
2715649bp
UniRef50_P49207 (61%/107)
Cluster: 60S ribosomal protein L34; n=62; Fungi/Metazoa group|Rep: 60S ribosomal protein L34 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005737 C cytoplasm
3450 ceN-5963
707bp
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI0000D562EA (38%/84)
Cluster: PREDICTED: similar to CG4974-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG4974-PA - Tribolium castaneum
GO:0005578 C extracellular matrix
GO:0016020 C membrane
GO:0048503 F obsolete GPI anchor binding
GO:0015986 P ATP synthesis coupled proton transport
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
previous next from show/3812

- SilkBase 1999-2023 -