SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/3812
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
151 ceN-0238
478bp
chromo21/Bm_scaf7
8313734bp
UniRef50_P17704 (86%/115)
Cluster: 40S ribosomal protein S17; n=63; Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
152 ceN-0239
629bp
chromo9/Bm_scaf14
6760189bp
UniRef50_Q8I0P8 (53%/76)
Cluster: CG32405-PA; n=9; Coelomata|Rep: CG32405-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0042302 F structural constituent of cuticle
GO:0005198 F structural molecule activity
153 ceN-0241
505bp
chromo28/Bm_scaf29
4724502bp
UniRef50_P28066 (61%/65)
Cluster: Proteasome subunit alpha type-5; n=115; Eukaryota|Rep: Proteasome subunit alpha type-5 - Homo sapiens (Human)
GO:0000502 C proteasome complex
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005839 C proteasome core complex
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0043234 C protein-containing complex
154 ceN-0243
686bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q9NL89 (60%/175)
Cluster: Beta-1,3-glucan-binding protein precursor; n=5; Obtectomera|Rep: Beta-1,3-glucan-binding protein precursor - Bombyx mori (Silk moth)
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006955 P immune response
GO:0008367 F obsolete bacterial cell surface binding
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0009620 P response to fungus
155 ceN-0244
686bp
chromo17/Bm_scaf21
5628829bp
UniRef50_UPI00015B503E (98%/128)
Cluster: PREDICTED: similar to splicing factor u2af large subunit; n=2; Apocrita|Rep: PREDICTED: similar to splicing factor u2af large subunit - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
156 ceN-0245
656bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q9W5R8 (71%/206)
Cluster: 60S ribosomal protein L5; n=67; Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008097 F 5S rRNA binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040018 P positive regulation of multicellular organism growth
GO:0040035 P hermaphrodite genitalia development
157 ceN-0246
511bp
chromo23/Bm_scaf22
5301712bp
(no hit)
158 ceN-0249
672bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P05388 (71%/73)
Cluster: 60S acidic ribosomal protein P0; n=171; Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
159 ceN-0250
432bp
chromo16/Bm_scaf39
3876397bp
UniRef50_A0MNZ0 (90%/20)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
GO:0000046 P autophagosome maturation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005773 C vacuole
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006914 P autophagy
GO:0007034 P vacuolar transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0048278 P vesicle docking
160 ceN-0252
762bp
chromo26/Bm_scaf98
1322498bp
UniRef50_A0MNZ0 (58%/29)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005488 F binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007163 P establishment or maintenance of cell polarity
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0008407 P chaeta morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
161 ceN-0255
640bp
chromo27/Bm_scaf123
705469bp
UniRef50_O41928 (31%/41)
Cluster: Major DNA-binding protein; n=2; Murid herpesvirus 4|Rep: Major DNA-binding protein - Murid herpesvirus 4 (MuHV-4) (Murine gammaherpesvirus 68)
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0042025 C host cell nucleus
162 ceN-0256
706bp
chromo5/Bm_scaf54
2693215bp
UniRef50_Q8ITS7 (56%/99)
Cluster: Heat shock-like protein; n=1; Galleria mellonella|Rep: Heat shock-like protein - Galleria mellonella (Wax moth)
GO:0006950 P response to stress
163 ceN-0258
799bp
chromo14/Bm_scaf38
4008358bp
UniRef50_A0MNZ0 (73%/38)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
164 ceN-0265
432bp
chromo1/Bm_scaf8
8002931bp
UniRef50_UPI0000D560C0 (47%/42)
Cluster: PREDICTED: hypothetical protein; n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical protein - Tribolium castaneum
GO:0005622 C intracellular anatomical structure
GO:0008270 F zinc ion binding
165 ceN-0266
681bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (80%/179)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
166 ceN-0267
386bp
unknown/Bm_scaf1453
4011bp
UniRef50_Q30DC3 (88%/36)
Cluster: Cytochrome c oxidase subunit I; n=30; Panarthropoda|Rep: Cytochrome c oxidase subunit I - Pagyris cymothoe
GO:0004129 F cytochrome-c oxidase activity
GO:0005506 F iron ion binding
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
167 ceN-0270
690bp
chromo16/Bm_scaf4
9119588bp
UniRef50_A1XDB3 (58%/36)
Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
168 ceN-0271
560bp
chromo14/Bm_scaf38
4008358bp
UniRef50_Q9VZS5 (54%/73)
Cluster: 60S ribosomal protein L28; n=13; Endopterygota|Rep: 60S ribosomal protein L28 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
169 ceN-0274
695bp
chromo12/Bm_scaf6
8265254bp
UniRef50_P50882 (79%/179)
Cluster: 60S ribosomal protein L9; n=17; Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
170 ceN-0275
409bp
chromo8/Bm_scaf58
2336930bp
UniRef50_Q46634 (38%/50)
Cluster: Amylovoran biosynthesis glycosyltransferase amsD; n=1; Erwinia amylovora|Rep: Amylovoran biosynthesis glycosyltransferase amsD - Erwinia amylovora (Fire blight bacteria)
GO:0000271 P polysaccharide biosynthetic process
GO:0009058 P biosynthetic process
GO:0009405 P obsolete pathogenesis
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0045449 P regulation of transcription, DNA-templated
171 ceN-0280
402bp
unknown/Bm_scaf1453
4011bp
UniRef50_Q5GGF4 (41%/102)
Cluster: Cytochrome c oxidase subunit I; n=2742; Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia melitaearum (Parasitoid wasp)
GO:0004129 F cytochrome-c oxidase activity
GO:0005506 F iron ion binding
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0051597 P response to methylmercury
172 ceN-0281
706bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (93%/201)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
173 ceN-0283
470bp
chromo6/Bm_scaf11
6993210bp
UniRef50_UPI0000D57974 (45%/144)
Cluster: PREDICTED: similar to Y48G1BM.4; n=1; Tribolium castaneum|Rep: PREDICTED: similar to Y48G1BM.4 - Tribolium castaneum
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0015074 P DNA integration
GO:0004190 F aspartic-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008270 F zinc ion binding
174 ceN-0284
576bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P05388 (79%/182)
Cluster: 60S acidic ribosomal protein P0; n=171; Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
175 ceN-0285
763bp
chromo27/Bm_scaf50
3027839bp
UniRef50_A7I151 (42%/45)
Cluster: Putative probable lipopolysaccharide biosynthesis protein; n=1; Campylobacter hominis ATCC BAA-381|Rep: Putative probable lipopolysaccharide biosynthesis protein - Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 /CH001A)
GO:0009058 P biosynthetic process
GO:0004872 F signaling receptor activity
GO:0005041 F low-density lipoprotein particle receptor activity
GO:0005515 F protein binding
GO:0005624 C obsolete membrane fraction
GO:0005887 C integral component of plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0040008 P regulation of growth
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0015662 F P-type ion transporter activity
GO:0016787 F hydrolase activity
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0046872 F metal ion binding
GO:0004053 F arginase activity
GO:0006527 P arginine catabolic process
GO:0006547 P histidine metabolic process
GO:0006548 P histidine catabolic process
GO:0016813 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
GO:0030145 F manganese ion binding
GO:0050415 F formimidoylglutamase activity
176 ceN-0288
440bp
unknown/Bm_scaf1157
5752bp
UniRef50_A4S1I5 (40%/50)
Cluster: Predicted protein; n=1; Ostreococcus lucimarinus CCE9901|Rep: Predicted protein - Ostreococcus lucimarinus CCE9901
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
177 ceN-0289
483bp
chromo3/Bm_scaf63
2158332bp
(no hit)
178 ceN-0290
605bp
chromo1/Bm_scaf23
5097954bp
UniRef50_A0UA19 (27%/94)
Cluster: ATP/GTP-binding site motif A; n=10; Burkholderia|Rep: ATP/GTP-binding site motif A - Burkholderia cenocepacia MC0-3
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
179 ceN-0291
670bp
unknown/Bm_scaf598
13489bp
UniRef50_UPI00015B447A (63%/55)
Cluster: PREDICTED: similar to latrophilin-like receptor, partial; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to latrophilin-like receptor, partial - Nasonia vitripennis
GO:0004930 F G protein-coupled receptor activity
GO:0005529 F carbohydrate binding
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016524 F latrotoxin receptor activity
180 ceN-0292
530bp
unknown/Bm_scaf19853_contig65063
668bp
UniRef50_Q9XXW0 (96%/57)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
previous next from show/3812

- SilkBase 1999-2023 -