SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/3812
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1141 ceN-1508
616bp
chromo22/Bm_scaf18
5904300bp
UniRef50_A3XNR0 (27%/85)
Cluster: Putative uncharacterized protein; n=1; Leeuwenhoekiella blandensis MED217|Rep: Putative uncharacterized protein - Leeuwenhoekiella blandensis MED217
GO:0005524 F ATP binding
1142 ceN-1509
679bp
chromo26/Bm_scaf34
4438494bp
UniRef50_A0MNZ0 (57%/35)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
1143 ceN-1510
723bp
unknown/Bm_scaf7718_contig52928
825bp
UniRef50_A7SUZ6 (62%/61)
Cluster: Predicted protein; n=2; Eukaryota|Rep: Predicted protein - Nematostella vectensis
1144 ceN-1511
479bp
unknown/Bm_scaf1817
3936bp
UniRef50_Q6IE02 (55%/113)
Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Rep: Mod(Mdg4)-heS00531 - Bombyx mori (Silk moth)
GO:0005515 F protein binding
GO:0007154 P cell communication
GO:0035091 F phosphatidylinositol binding
1145 ceN-1512
680bp
chromo19/Bm_scaf100
1353457bp
UniRef50_P46781 (89%/175)
Cluster: 40S ribosomal protein S9; n=181; Eukaryota|Rep: 40S ribosomal protein S9 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0015935 C small ribosomal subunit
1146 ceN-1513
384bp
unknown/Bm_scaf345
53680bp
UniRef50_UPI0000D55453 (50%/56)
Cluster: PREDICTED: similar to CG14567-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG14567-PA - Tribolium castaneum
GO:0006824 P cobalt ion transport
GO:0015087 F cobalt ion transmembrane transporter activity
GO:0015095 F magnesium ion transmembrane transporter activity
GO:0015693 P magnesium ion transport
GO:0016020 C membrane
GO:0030001 P metal ion transport
GO:0046873 F metal ion transmembrane transporter activity
1147 ceN-1514
590bp
unknown/
0bp
UniRef50_UPI0000ECD483 (59%/74)
Cluster: UPI0000ECD483 related cluster; n=1; Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry - Gallus gallus
GO:0003723 F RNA binding
GO:0004521 F endoribonuclease activity
1148 ceN-1515
666bp
chromo23/Bm_scaf83
1589841bp
UniRef50_A3LQK5 (35%/68)
Cluster: ADP/ATP carrier protein; n=5; Saccharomycetales|Rep: ADP/ATP carrier protein - Pichia stipitis (Yeast)
GO:0005488 F binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
1149 ceN-1516
750bp
chromo14/Bm_scaf53
2821953bp
UniRef50_Q9NVA2 (73%/226)
Cluster: Septin-11; n=204; Eumetazoa|Rep: Septin-11 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0007049 P cell cycle
GO:0051291 P protein heterooligomerization
GO:0051301 P cell division
1150 ceN-1517
530bp
chromo9/Bm_scaf14
6760189bp
UniRef50_Q4LEQ7 (32%/110)
Cluster: Glycine rich protein; n=6; Endopterygota|Rep: Glycine rich protein - Bombyx mori (Silk moth)
1151 ceN-1518
711bp
chromo22/Bm_scaf18
5904300bp
UniRef50_UPI0000D563B0 (41%/234)
Cluster: PREDICTED: similar to CG4088-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG4088-PA, isoform A - Tribolium castaneum
GO:0003677 F DNA binding
GO:0005664 C nuclear origin of replication recognition complex
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007611 P learning or memory
GO:0007612 P learning
GO:0008355 P olfactory learning
GO:0030536 P larval feeding behavior
GO:0001584 F obsolete rhodopsin-like receptor activity
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016021 C integral component of membrane
1152 ceN-1519
380bp
chromo24/Bm_scaf43
3469235bp
UniRef50_UPI0000E47304 (86%/15)
Cluster: PREDICTED: hypothetical protein; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: hypothetical protein - Strongylocentrotus purpuratus
GO:0001744 P insect visual primordium formation
GO:0001745 P compound eye morphogenesis
GO:0001746 P Bolwig's organ morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007455 P eye-antennal disc morphogenesis
GO:0007623 P circadian rhythm
GO:0008347 P glial cell migration
GO:0009649 P entrainment of circadian clock
GO:0043565 F sequence-specific DNA binding
GO:0045449 P regulation of transcription, DNA-templated
GO:0001657 P ureteric bud development
GO:0005667 C transcription regulator complex
GO:0007389 P pattern specification process
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0007605 P sensory perception of sound
GO:0030855 P epithelial cell differentiation
GO:0030878 P thyroid gland development
GO:0042472 P inner ear morphogenesis
GO:0045664 P regulation of neuron differentiation
GO:0048538 P thymus development
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048856 P anatomical structure development
GO:0051451 P myoblast migration
GO:0006366 P transcription by RNA polymerase II
GO:0009653 P anatomical structure morphogenesis
1153 ceN-1521
758bp
unknown/Bm_scaf612
17203bp
UniRef50_Q00325 (58%/235)
Cluster: Phosphate carrier protein, mitochondrial precursor; n=90; Eukaryota|Rep: Phosphate carrier protein, mitochondrial precursor - Homo sapiens (Human)
GO:0005488 F binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005887 C integral component of plasma membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006810 P transport
GO:0015293 F symporter activity
GO:0015320 F phosphate:proton symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005215 F transporter activity
GO:0009536 C plastid
1154 ceN-1523
748bp
chromo15/Bm_scaf66
2037340bp
UniRef50_Q8N6S4 (70%/135)
Cluster: Ankyrin repeat domain-containing protein 13C; n=49; Eumetazoa|Rep: Ankyrin repeat domain-containing protein 13C - Homo sapiens (Human)
GO:0005783 C endoplasmic reticulum
1155 ceN-1524
672bp
chromo28/Bm_scaf47
3212212bp
UniRef50_Q9W214 (53%/150)
Cluster: CG9952-PA; n=2; Sophophora|Rep: CG9952-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0019005 C SCF ubiquitin ligase complex
GO:0006512 P obsolete ubiquitin cycle
1156 ceN-1525
570bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P62263 (71%/140)
Cluster: 40S ribosomal protein S14; n=231; cellular organisms|Rep: 40S ribosomal protein S14 - Homo sapiens (Human)
GO:0000028 P ribosomal small subunit assembly
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030490 P maturation of SSU-rRNA
GO:0030529 C ribonucleoprotein complex
GO:0045892 P negative regulation of transcription, DNA-templated
1157 ceN-1526
536bp
chromo22/Bm_scaf18
5904300bp
UniRef50_Q9BPR4 (75%/124)
Cluster: Cuticle protein; n=1; Bombyx mori|Rep: Cuticle protein - Bombyx mori (Silk moth)
GO:0042302 F structural constituent of cuticle
1158 ceN-1527
668bp
chromo6/Bm_scaf78
1734898bp
UniRef50_UPI0000DB6F49 (39%/164)
Cluster: PREDICTED: similar to CG3168-PA, isoform A, partial; n=1; Apis mellifera|Rep: PREDICTED: similar to CG3168-PA, isoform A, partial - Apis mellifera
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016021 C integral component of membrane
1159 ceN-1528
566bp
chromo6/Bm_scaf11
6993210bp
UniRef50_Q17B07 (24%/93)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
1160 ceN-1529
762bp
chromo20/Bm_scaf99
1369550bp
UniRef50_P55084 (69%/208)
Cluster: Trifunctional enzyme subunit beta, mitochondrial precursor (TP-beta) [Includes: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase)]; n=49; cellular organisms|Rep: Trifunctional enzyme subunit beta, mitochondrial precursor (TP-beta) [Includes: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (Acetyl-CoA acyltransferase) (Beta-ketothiolase)] - Homo sapiens (Human)
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0003988 F acetyl-CoA C-acyltransferase activity
GO:0004300 F enoyl-CoA hydratase activity
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008415 F acyltransferase activity
GO:0016740 F transferase activity
GO:0005737 C cytoplasm
GO:0016042 P lipid catabolic process
1161 ceN-1530
520bp
chromo21/Bm_scaf7
8313734bp
UniRef50_UPI0000E4828F (48%/25)
Cluster: PREDICTED: similar to MGC83919 protein; n=5; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to MGC83919 protein - Strongylocentrotus purpuratus
1162 ceN-1533
758bp
chromo4/Bm_scaf91
1567689bp
UniRef50_P42159 (30%/71)
Cluster: Class II receptor tyrosine kinase; n=5; Geodia cydonium|Rep: Class II receptor tyrosine kinase - Geodia cydonium (Sponge)
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0004872 F signaling receptor activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016740 F transferase activity
1163 ceN-1534
771bp
chromo6/Bm_scaf11
6993210bp
UniRef50_Q9UQ13 (63%/87)
Cluster: Leucine-rich repeat protein SHOC-2; n=36; Eumetazoa|Rep: Leucine-rich repeat protein SHOC-2 - Homo sapiens (Human)
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007265 P Ras protein signal transduction
GO:0008543 P fibroblast growth factor receptor signaling pathway
1164 ceN-1535
758bp
chromo23/Bm_scaf22
5301712bp
UniRef50_Q6ZT51 (33%/105)
Cluster: CDNA FLJ44954 fis, clone BRAWH2010364; n=3; Homo sapiens|Rep: CDNA FLJ44954 fis, clone BRAWH2010364 - Homo sapiens (Human)
GO:0005509 F calcium ion binding
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
GO:0031424 P keratinization
GO:0030435 P sporulation resulting in formation of a cellular spore
1165 ceN-1536
745bp
chromo7/Bm_scaf15
6423983bp
UniRef50_UPI00015B4676 (33%/71)
Cluster: PREDICTED: similar to ORF; n=2; Nasonia vitripennis|Rep: PREDICTED: similar to ORF - Nasonia vitripennis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
1166 ceN-1538
493bp
unknown/Bm_scaf791
9086bp
UniRef50_Q0WWS3 (55%/27)
Cluster: Putative uncharacterized protein; n=1; Arabidopsis thaliana|Rep: Putative uncharacterized protein - Arabidopsis thaliana (Mouse-ear cress)
GO:0001584 F obsolete rhodopsin-like receptor activity
GO:0004871 F obsolete signal transducer activity
GO:0004872 F signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016021 C integral component of membrane
GO:0016493 F C-C chemokine receptor activity
GO:0016494 F C-X-C chemokine receptor activity
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1167 ceN-1540
614bp
chromo10/Bm_scaf30
4522305bp
UniRef50_Q7KVR8 (63%/172)
Cluster: CG9113-PD, isoform D; n=12; Eumetazoa|Rep: CG9113-PD, isoform D - Drosophila melanogaster (Fruit fly)
GO:0005488 F binding
GO:0005515 F protein binding
GO:0006461 P protein-containing complex assembly
GO:0006886 P intracellular protein transport
GO:0006901 P vesicle coating
GO:0007269 P neurotransmitter secretion
GO:0008021 C synaptic vesicle
GO:0008565 F obsolete protein transporter activity
GO:0016183 P synaptic vesicle coating
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0030135 C coated vesicle
GO:0005215 F transporter activity
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030119 C AP-type membrane coat adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0001703 P gastrulation with mouth forming first
GO:0002119 P nematode larval development
GO:0007626 P locomotory behavior
GO:0008150 P biological_process
GO:0009306 P protein secretion
GO:0009790 P embryo development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0005798 C Golgi-associated vesicle
GO:0030133 C transport vesicle
1168 ceN-1541
351bp
chromo6/Bm_scaf111
965032bp
UniRef50_Q08473 (62%/93)
Cluster: RNA-binding protein squid; n=22; Endopterygota|Rep: RNA-binding protein squid - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0007293 P germarium-derived egg chamber formation
GO:0007297 P ovarian follicle cell migration
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0008298 P intracellular mRNA localization
GO:0009953 P dorsal/ventral pattern formation
GO:0017148 P negative regulation of translation
GO:0019094 P pole plasm mRNA localization
GO:0030529 C ribonucleoprotein complex
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0035062 C omega speckle
1169 ceN-1542
574bp
chromo4/Bm_scaf13
6731059bp
UniRef50_Q83HK3 (28%/64)
Cluster: Putative uncharacterized protein; n=2; Tropheryma whipplei|Rep: Putative uncharacterized protein - Tropheryma whipplei (strain TW08/27) (Whipple's bacillus)
GO:0005975 P carbohydrate metabolic process
GO:0016758 F hexosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0030259 P lipid glycosylation
1170 ceN-1545
334bp
chromo25/Bm_scaf65
2150616bp
UniRef50_Q15TP2 (29%/51)
Cluster: OmpA-like transmembrane region precursor; n=1; Pseudoalteromonas atlantica T6c|Rep: OmpA-like transmembrane region precursor - Pseudoalteromonas atlantica (strain T6c / BAA-1087)
GO:0009279 C cell outer membrane
GO:0016021 C integral component of membrane
GO:0005198 F structural molecule activity
GO:0019012 C virion component
GO:0019028 C viral capsid
previous next from show/3812

- SilkBase 1999-2023 -