SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/21503
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
12301 rbmte14f03
286bp
unknown/
0bp
UniRef50_Q6A7R1 (46%/30)
Cluster: Transport system permease; n=1; Propionibacterium acnes|Rep: Transport system permease - Propionibacterium acnes
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0045449 P regulation of transcription, DNA-templated
12302 rbmte14f04
503bp
unknown/
0bp
UniRef50_P41094 (87%/139)
Cluster: 40S ribosomal protein S18; n=137; Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005843 C cytosolic small ribosomal subunit
GO:0015935 C small ribosomal subunit
12303 rbmte14f05
754bp
unknown/
0bp
UniRef50_Q16M76 (39%/123)
Cluster: Predicted protein; n=2; Culicidae|Rep: Predicted protein - Aedes aegypti (Yellowfever mosquito)
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
12304 rbmte14f06
681bp
unknown/
0bp
UniRef50_P04350 (96%/196)
Cluster: Tubulin beta-4 chain; n=4602; root|Rep: Tubulin beta-4 chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0000212 P meiotic spindle organization
GO:0002119 P nematode larval development
GO:0005737 C cytoplasm
GO:0007051 P spindle organization
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
12305 rbmte14f07
704bp
unknown/
0bp
UniRef50_UPI0000D56CA4 (69%/142)
Cluster: PREDICTED: similar to CG6647-PA, isoform A isoform 1; n=2; Tribolium castaneum|Rep: PREDICTED: similar to CG6647-PA, isoform A isoform 1 - Tribolium castaneum
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006820 P anion transport
GO:0008308 F voltage-gated anion channel activity
GO:0015853 P adenine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019867 C outer membrane
GO:0022844 F voltage-gated anion channel activity
GO:0005261 F cation channel activity
GO:0015288 F porin activity
12306 rbmte14f08
475bp
unknown/
0bp
UniRef50_UPI0000D55B00 (69%/71)
Cluster: PREDICTED: similar to ADP-ribosylation factor-like 6 interacting protein 4; n=1; Tribolium castaneum|Rep: PREDICTED: similar to ADP-ribosylation factor-like 6 interacting protein 4 - Tribolium castaneum
GO:0005634 C nucleus
GO:0008380 P RNA splicing
12307 rbmte14f09
624bp
unknown/
0bp
UniRef50_Q1D6L6 (31%/51)
Cluster: Putative uncharacterized protein; n=1; Myxococcus xanthus DK 1622|Rep: Putative uncharacterized protein - Myxococcus xanthus (strain DK 1622)
GO:0004222 F metalloendopeptidase activity
GO:0006508 P proteolysis
GO:0009405 P obsolete pathogenesis
GO:0046872 F metal ion binding
GO:0003677 F DNA binding
GO:0045449 P regulation of transcription, DNA-templated
GO:0000074 P regulation of cell cycle
GO:0000084 P mitotic S phase
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
12308 rbmte14f10
718bp
unknown/
0bp
UniRef50_Q2NGN9 (32%/110)
Cluster: Partially conserved hypothetical membrane-spanning protein; n=1; Methanosphaera stadtmanae DSM 3091|Rep: Partially conserved hypothetical membrane-spanning protein - Methanosphaera stadtmanae (strain DSM 3091)
GO:0005739 C mitochondrion
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0000287 F magnesium ion binding
GO:0004427 F inorganic diphosphatase activity
GO:0005737 C cytoplasm
GO:0006796 P phosphate-containing compound metabolic process
GO:0016787 F hydrolase activity
12309 rbmte14f11
436bp
unknown/
0bp
UniRef50_Q5CQL9 (34%/79)
Cluster: Large low complexity coiled coil protien with large repeat region; n=4; cellular organisms|Rep: Large low complexity coiled coil protien with large repeat region - Cryptosporidium parvum Iowa II
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0009653 P anatomical structure morphogenesis
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045786 P negative regulation of cell cycle
GO:0046872 F metal ion binding
12310 rbmte14f12
415bp
unknown/
0bp
UniRef50_P17704 (87%/104)
Cluster: 40S ribosomal protein S17; n=63; Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
12311 rbmte14f13
495bp
unknown/
0bp
UniRef50_P41094 (78%/146)
Cluster: 40S ribosomal protein S18; n=137; Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005843 C cytosolic small ribosomal subunit
GO:0015935 C small ribosomal subunit
12312 rbmte14f14
292bp
unknown/
0bp
UniRef50_A0CAM5 (31%/60)
Cluster: Chromosome undetermined scaffold_161, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_161, whole genome shotgun sequence - Paramecium tetraurelia
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
12313 rbmte14f15
451bp
unknown/
0bp
UniRef50_A2EYA1 (30%/95)
Cluster: Viral A-type inclusion protein, putative; n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion protein, putative - Trichomonas vaginalis G3
GO:0000166 F nucleotide binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005524 F ATP binding
GO:0005694 C chromosome
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030870 C Mre11 complex
GO:0046872 F metal ion binding
GO:0000155 F phosphorelay sensor kinase activity
GO:0004673 F protein histidine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
12314 rbmte14f16
590bp
unknown/
0bp
UniRef50_P11450 (25%/111)
Cluster: Follicle cell protein 3C-1; n=18; Sophophora|Rep: Follicle cell protein 3C-1 - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
12315 rbmte14f17
720bp
unknown/
0bp
UniRef50_Q9VGR1 (30%/93)
Cluster: CG10703-PA; n=3; Sophophora|Rep: CG10703-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005198 F structural molecule activity
GO:0005856 C cytoskeleton
12316 rbmte14f18
649bp
unknown/
0bp
UniRef50_Q1PCB0 (99%/191)
Cluster: Pyridoxine 5'-phosphate oxidase; n=5; Endopterygota|Rep: Pyridoxine 5'-phosphate oxidase - Bombyx mori (Silk moth)
GO:0004733 F pyridoxamine-phosphate oxidase activity
GO:0008615 P pyridoxine biosynthetic process
GO:0010181 F FMN binding
GO:0005515 F protein binding
GO:0016491 F oxidoreductase activity
12317 rbmte14f19
475bp
unknown/
0bp
UniRef50_Q4YWW7 (41%/39)
Cluster: Calcium/calmodulin-dependent protein kinase, putative; n=4; Plasmodium (Vinckeia)|Rep: Calcium/calmodulin-dependent protein kinase, putative - Plasmodium berghei
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003891 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0009360 C DNA polymerase III complex
GO:0043625 C delta DNA polymerase complex
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0006118 P obsolete electron transport
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
12318 rbmte14f20
268bp
unknown/
0bp
UniRef50_A4HFF6 (39%/41)
Cluster: Putative uncharacterized protein; n=3; Leishmania|Rep: Putative uncharacterized protein - Leishmania braziliensis
12319 rbmte14f21
492bp
unknown/
0bp
UniRef50_Q17KB3 (29%/126)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
12320 rbmte14f22
681bp
unknown/
0bp
(no hit)
12321 rbmte14f23
448bp
unknown/
0bp
UniRef50_A2EYA1 (30%/95)
Cluster: Viral A-type inclusion protein, putative; n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion protein, putative - Trichomonas vaginalis G3
GO:0000166 F nucleotide binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005524 F ATP binding
GO:0005694 C chromosome
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030870 C Mre11 complex
GO:0046872 F metal ion binding
GO:0000155 F phosphorelay sensor kinase activity
GO:0004673 F protein histidine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
12322 rbmte14f24
344bp
unknown/
0bp
UniRef50_A1ZLC6 (28%/88)
Cluster: Putative ABC transporter permease; n=1; Microscilla marina ATCC 23134|Rep: Putative ABC transporter permease - Microscilla marina ATCC 23134
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005509 F calcium ion binding
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0000155 F phosphorelay sensor kinase activity
GO:0000156 F phosphorelay response regulator activity
GO:0000160 P phosphorelay signal transduction system
GO:0004673 F protein histidine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0016310 P phosphorylation
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
12323 rbmte14g01
726bp
unknown/
0bp
UniRef50_Q9N2P3 (67%/178)
Cluster: Ferritin precursor; n=7; Obtectomera|Rep: Ferritin precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005488 F binding
GO:0006826 P iron ion transport
GO:0006879 P cellular iron ion homeostasis
GO:0008199 F ferric iron binding
GO:0016491 F oxidoreductase activity
GO:0046914 F transition metal ion binding
GO:0008043 C intracellular ferritin complex
GO:0008198 F ferrous iron binding
12324 rbmte14g02
272bp
unknown/
0bp
UniRef50_A4HFF6 (39%/41)
Cluster: Putative uncharacterized protein; n=3; Leishmania|Rep: Putative uncharacterized protein - Leishmania braziliensis
12325 rbmte14g03
783bp
unknown/
0bp
UniRef50_Q86DP2 (32%/141)
Cluster: Malate dehydrogenase; n=11; Fungi/Metazoa group|Rep: Malate dehydrogenase - Plicopurpura patula
GO:0003824 F catalytic activity
GO:0005975 P carbohydrate metabolic process
GO:0006099 P tricarboxylic acid cycle
GO:0006100 P obsolete tricarboxylic acid cycle intermediate metabolic process
GO:0006108 P malate metabolic process
GO:0016491 F oxidoreductase activity
GO:0016615 F malate dehydrogenase activity
GO:0030060 F L-malate dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006096 P glycolytic process
GO:0008150 P biological_process
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0044262 P cellular carbohydrate metabolic process
GO:0009507 C chloroplast
GO:0005743 C mitochondrial inner membrane
12326 rbmte14g04
771bp
unknown/
0bp
UniRef50_O15514 (70%/130)
Cluster: DNA-directed RNA polymerase II subunit RPB4; n=30; Eumetazoa|Rep: DNA-directed RNA polymerase II subunit RPB4 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0006350 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0044237 P cellular metabolic process
GO:0009792 P embryo development ending in birth or egg hatching
12327 rbmte14g06
445bp
unknown/
0bp
UniRef50_Q8YVG6 (31%/41)
Cluster: Permease protein of ABC transporter; n=14; Bacteria|Rep: Permease protein of ABC transporter - Anabaena sp. (strain PCC 7120)
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0000166 F nucleotide binding
GO:0004017 F adenylate kinase activity
GO:0005524 F ATP binding
GO:0006139 P nucleobase-containing compound metabolic process
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0016776 F phosphotransferase activity, phosphate group as acceptor
GO:0019201 F nucleoside monophosphate kinase activity
GO:0019205 F nucleobase-containing compound kinase activity
12328 rbmte14g07
794bp
unknown/
0bp
UniRef50_O75953 (51%/35)
Cluster: DnaJ homolog subfamily B member 5; n=128; cellular organisms|Rep: DnaJ homolog subfamily B member 5 - Homo sapiens (Human)
GO:0006457 P protein folding
GO:0006986 P response to unfolded protein
GO:0031072 F heat shock protein binding
GO:0051082 F unfolded protein binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006915 P apoptotic process
GO:0007283 P spermatogenesis
GO:0006950 P response to stress
12329 rbmte14g08
701bp
unknown/
0bp
UniRef50_P25789 (80%/210)
Cluster: Proteasome subunit alpha type-4; n=113; Eukaryota|Rep: Proteasome subunit alpha type-4 - Homo sapiens (Human)
GO:0000502 C proteasome complex
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005839 C proteasome core complex
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0043234 C protein-containing complex
GO:0006508 P proteolysis
12330 rbmte14g09
704bp
unknown/
0bp
UniRef50_A0CFP5 (37%/53)
Cluster: Chromosome undetermined scaffold_176, whole genome shotgun sequence; n=4; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_176, whole genome shotgun sequence - Paramecium tetraurelia
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0003677 F DNA binding
previous next from show/21503

- SilkBase 1999-2023 -