SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/20635
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
6991 bmnc29f22
657bp
unknown/
0bp
UniRef50_P11042 (89%/166)
Cluster: Early 39 kDa protein; n=5; Nucleopolyhedrovirus|Rep: Early 39 kDa protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0019058 P viral life cycle
GO:0045449 P regulation of transcription, DNA-templated
6992 bmnc29f24
308bp
unknown/
0bp
UniRef50_Q962S5 (95%/65)
Cluster: Ribosomal protein L38; n=14; Eukaryota|Rep: Ribosomal protein L38 - Spodoptera frugiperda (Fall armyworm)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0007276 P gamete generation
GO:0040010 P positive regulation of growth rate
6993 bmnc29g01
406bp
unknown/
0bp
UniRef50_P62857 (78%/51)
Cluster: 40S ribosomal protein S28; n=137; Eukaryota|Rep: 40S ribosomal protein S28 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005829 C cytosol
GO:0005830 C cytosolic ribosome
6994 bmnc29g02
645bp
unknown/
0bp
UniRef50_A0DFX9 (56%/25)
Cluster: Chromosome undetermined scaffold_5, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_5, whole genome shotgun sequence - Paramecium tetraurelia
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009725 P response to hormone
GO:0009734 P auxin-activated signaling pathway
GO:0045449 P regulation of transcription, DNA-templated
GO:0046983 F protein dimerization activity
6995 bmnc29g03
564bp
unknown/
0bp
UniRef50_Q9VNB9 (67%/113)
Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0002119 P nematode larval development
GO:0007276 P gamete generation
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0018987 P water homeostasis
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040017 P positive regulation of locomotion
6996 bmnc29g04
639bp
unknown/
0bp
UniRef50_P32651 (91%/204)
Cluster: Structural glycoprotein gp41; n=34; Nucleopolyhedrovirus|Rep: Structural glycoprotein gp41 - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005198 F structural molecule activity
GO:0019012 C virion component
6997 bmnc29g05
647bp
unknown/
0bp
UniRef50_P30050 (80%/160)
Cluster: 60S ribosomal protein L12; n=158; Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
6998 bmnc29g06
258bp
unknown/
0bp
UniRef50_P41675 (90%/62)
Cluster: Uncharacterized 7.2 kDa protein in HE65-PK2 intergenic region precursor; n=4; Nucleopolyhedrovirus|Rep: Uncharacterized 7.2 kDa protein in HE65-PK2 intergenic region precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0003723 F RNA binding
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0016779 F nucleotidyltransferase activity
GO:0031123 P RNA 3'-end processing
GO:0043631 P RNA polyadenylation
6999 bmnc29g07
598bp
unknown/
0bp
UniRef50_Q49549 (53%/26)
Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 - Mycoplasma hyorhinis
7000 bmnc29g08
637bp
unknown/
0bp
UniRef50_O10372 (76%/68)
Cluster: Occlusion-derived virus envelope protein E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E27 - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0019031 C viral envelope
7001 bmnc29g09
632bp
unknown/
0bp
UniRef50_P33514 (79%/188)
Cluster: 40S ribosomal protein S7; n=94; Eukaryota|Rep: 40S ribosomal protein S7 - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005843 C cytosolic small ribosomal subunit
GO:0005811 C lipid droplet
7002 bmnc29g10
527bp
unknown/
0bp
UniRef50_P34834 (45%/172)
Cluster: ATP synthase a chain; n=182; Protostomia|Rep: ATP synthase a chain - Anopheles gambiae (African malaria mosquito)
GO:0005739 C mitochondrion
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0008553 F P-type proton-exporting transporter activity
GO:0016787 F hydrolase activity
7003 bmnc29g11
597bp
unknown/
0bp
UniRef50_Q06691 (77%/181)
Cluster: Telokin-like protein 20; n=6; Nucleopolyhedrovirus|Rep: Telokin-like protein 20 - Autographa californica nuclear polyhedrosis virus (AcMNPV)
7004 bmnc29g12
652bp
unknown/
0bp
UniRef50_P17500 (58%/198)
Cluster: Major capsid protein; n=15; Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0005198 F structural molecule activity
GO:0019012 C virion component
GO:0019028 C viral capsid
7005 bmnc29g13
551bp
unknown/
0bp
UniRef50_Q0WX42 (79%/100)
Cluster: NADH-ubiquinone oxidoreductase chain 1; n=44; Protostomia|Rep: NADH-ubiquinone oxidoreductase chain 1 - Apoda limacodes
GO:0005739 C mitochondrion
GO:0006118 P obsolete electron transport
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
7006 bmnc29g14
300bp
unknown/
0bp
UniRef50_Q5SSZ7 (47%/48)
Cluster: Zinc/RING finger protein 3 precursor; n=20; Eumetazoa|Rep: Zinc/RING finger protein 3 precursor - Mus musculus (Mouse)
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
7007 bmnc29g15
604bp
unknown/
0bp
UniRef50_Q9VR50 (45%/125)
Cluster: Solute carrier family 35 member E1 homolog; n=6; Endopterygota|Rep: Solute carrier family 35 member E1 homolog - Drosophila melanogaster (Fruit fly)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0009507 C chloroplast
7008 bmnc29g16
616bp
unknown/
0bp
UniRef50_P15532 (75%/148)
Cluster: Nucleoside diphosphate kinase A; n=92; cellular organisms|Rep: Nucleoside diphosphate kinase A - Mus musculus (Mouse)
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004550 F nucleoside diphosphate kinase activity
GO:0005524 F ATP binding
GO:0005625 C obsolete soluble fraction
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005792 C obsolete microsome
GO:0006183 P GTP biosynthetic process
GO:0006228 P UTP biosynthetic process
GO:0006241 P CTP biosynthetic process
GO:0007595 P lactation
GO:0009117 P nucleotide metabolic process
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0030879 P mammary gland development
GO:0046872 F metal ion binding
GO:0001726 C ruffle
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0008285 P negative regulation of cell population proliferation
GO:0009142 P nucleoside triphosphate biosynthetic process
GO:0030027 C lamellipodium
GO:0043066 P negative regulation of apoptotic process
GO:0045618 P positive regulation of keratinocyte differentiation
GO:0045682 P regulation of epidermis development
GO:0045786 P negative regulation of cell cycle
GO:0050679 P positive regulation of epithelial cell proliferation
GO:0006915 P apoptotic process
GO:0006917 P apoptotic process
GO:0005615 C extracellular space
GO:0005739 C mitochondrion
GO:0009507 C chloroplast
GO:0009579 C thylakoid
7009 bmnc29g17
557bp
unknown/
0bp
UniRef50_Q4GXT1 (74%/159)
Cluster: Ribosomal protein S10e; n=3; Fungi/Metazoa group|Rep: Ribosomal protein S10e - Agriotes lineatus (Lined click beetle)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
7010 bmnc29g18
606bp
unknown/
0bp
UniRef50_O10372 (74%/58)
Cluster: Occlusion-derived virus envelope protein E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E27 - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0019031 C viral envelope
7011 bmnc29g19
387bp
unknown/
0bp
UniRef50_P41424 (88%/98)
Cluster: Uncharacterized 12.2 kDa protein in EGT-IAP1 intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 12.2 kDa protein in EGT-IAP1 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
7012 bmnc29g20
533bp
unknown/
0bp
UniRef50_Q5UAT5 (92%/145)
Cluster: 60S ribosomal protein L6; n=15; Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori (Silk moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0006355 P regulation of transcription, DNA-templated
7013 bmnc29g21
477bp
unknown/
0bp
UniRef50_P16709 (100%/77)
Cluster: Ubiquitin-like protein precursor; n=19; root|Rep: Ubiquitin-like protein precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005634 C nucleus
GO:0006464 P cellular protein modification process
GO:0006512 P obsolete ubiquitin cycle
GO:0019028 C viral capsid
7014 bmnc29g22
287bp
unknown/
0bp
UniRef50_P41479 (69%/75)
Cluster: Uncharacterized 24.1 kDa protein in LEF4-P33 intergenic region; n=4; Nucleopolyhedrovirus|Rep: Uncharacterized 24.1 kDa protein in LEF4-P33 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005199 F structural constituent of cell wall
GO:0005576 C extracellular region
GO:0006030 P chitin metabolic process
GO:0008061 F chitin binding
GO:0005506 F iron ion binding
GO:0006118 P obsolete electron transport
GO:0009055 F electron transfer activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0005216 F ion channel activity
GO:0005272 F sodium channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031402 F sodium ion binding
7015 bmnc29g23
623bp
unknown/
0bp
UniRef50_Q4SI60 (33%/57)
Cluster: Chromosome 5 SCAF14581, whole genome shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 5 SCAF14581, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0004806 F triglyceride lipase activity
GO:0006629 P lipid metabolic process
7016 bmnc29g24
130bp
unknown/
0bp
UniRef50_A6RLN9 (47%/21)
Cluster: Predicted protein; n=1; Botryotinia fuckeliana B05.10|Rep: Predicted protein - Botryotinia fuckeliana B05.10
7017 bmnc29h01
477bp
unknown/
0bp
UniRef50_P17704 (87%/108)
Cluster: 40S ribosomal protein S17; n=63; Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
7018 bmnc29h02
637bp
unknown/
0bp
UniRef50_P25695 (89%/205)
Cluster: Uncharacterized 41.5 kDa protein in P6.9-VP48 intergenic region; n=13; Nucleopolyhedrovirus|Rep: Uncharacterized 41.5 kDa protein in P6.9-VP48 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
7019 bmnc29h03
364bp
unknown/
0bp
UniRef50_P41479 (79%/49)
Cluster: Uncharacterized 24.1 kDa protein in LEF4-P33 intergenic region; n=4; Nucleopolyhedrovirus|Rep: Uncharacterized 24.1 kDa protein in LEF4-P33 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005199 F structural constituent of cell wall
GO:0005576 C extracellular region
GO:0006030 P chitin metabolic process
GO:0008061 F chitin binding
GO:0005737 C cytoplasm
GO:0051085 P chaperone cofactor-dependent protein refolding
7020 bmnc29h04
647bp
unknown/
0bp
UniRef50_P41678 (85%/198)
Cluster: Capsid protein p24; n=14; Nucleopolyhedrovirus|Rep: Capsid protein p24 - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005198 F structural molecule activity
GO:0019012 C virion component
GO:0019028 C viral capsid
previous next from show/20635

- SilkBase 1999-2023 -