SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/20635
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
12961 rbmnc17m04
475bp
unknown/
0bp
UniRef50_A6YPG5 (80%/154)
Cluster: 40S ribosomal protein S11; n=7; Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma infestans (Assassin bug)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0005843 C cytosolic small ribosomal subunit
GO:0019843 F rRNA binding
GO:0000028 P ribosomal small subunit assembly
GO:0000723 P telomere maintenance
GO:0005737 C cytoplasm
GO:0006450 P regulation of translational fidelity
GO:0005634 C nucleus
GO:0005829 C cytosol
12962 rbmnc17m05
876bp
unknown/
0bp
UniRef50_P41718 (52%/268)
Cluster: Occlusion-derived virus envelope protein E56; n=21; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E56 - Choristoneura fumiferana nuclear polyhedrosis virus (CfMNPV)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019012 C virion component
GO:0019031 C viral envelope
12963 rbmnc17m06
388bp
unknown/
0bp
UniRef50_Q0ZD84 (76%/109)
Cluster: Ribosomal protein S26; n=9; Coelomata|Rep: Ribosomal protein S26 - Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
12964 rbmnc17m07
323bp
unknown/
0bp
UniRef50_P41466 (82%/41)
Cluster: Uncharacterized 18.5 kDa protein in FP-SLP intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 18.5 kDa protein in FP-SLP intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
12965 rbmnc17m08
308bp
unknown/
0bp
UniRef50_P61927 (65%/94)
Cluster: 60S ribosomal protein L37; n=40; Euteleostomi|Rep: 60S ribosomal protein L37 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0005737 C cytoplasm
12966 rbmnc17m09
512bp
unknown/
0bp
UniRef50_Q9VNB9 (67%/113)
Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0002119 P nematode larval development
GO:0007276 P gamete generation
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0018987 P water homeostasis
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040017 P positive regulation of locomotion
12967 rbmnc17m10
505bp
unknown/
0bp
UniRef50_P62249 (82%/141)
Cluster: 40S ribosomal protein S16; n=64; Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005737 C cytoplasm
12968 rbmnc17m11
912bp
unknown/
0bp
UniRef50_P41469 (92%/243)
Cluster: Uncharacterized 30.4 kDa protein in LEF3-IAP2 intergenic region; n=11; Nucleopolyhedrovirus|Rep: Uncharacterized 30.4 kDa protein in LEF3-IAP2 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12969 rbmnc17m12
838bp
unknown/
0bp
UniRef50_Q5EMT9 (77%/166)
Cluster: Elongation factor 1-alpha-like protein; n=6; Fungi/Metazoa group|Rep: Elongation factor 1-alpha-like protein - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
12970 rbmnc17m13
864bp
unknown/
0bp
UniRef50_UPI0000519AD0 (44%/234)
Cluster: PREDICTED: similar to CG15111-PB, isoform B; n=2; Apocrita|Rep: PREDICTED: similar to CG15111-PB, isoform B - Apis mellifera
12971 rbmnc17m14
371bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
12972 rbmnc17m15
829bp
unknown/
0bp
UniRef50_Q9GSV9 (94%/19)
Cluster: Ornithine decarboxylase antizyme; n=1; Bombyx mori|Rep: Ornithine decarboxylase antizyme - Bombyx mori (Silk moth)
GO:0004857 F enzyme inhibitor activity
GO:0008073 F ornithine decarboxylase inhibitor activity
12973 rbmnc17m16
841bp
unknown/
0bp
UniRef50_Q90173 (94%/240)
Cluster: Zinc finger protein CG30; n=5; Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 - Bombyx mori nuclear polyhedrosis virus (BmNPV)
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
12974 rbmnc17m18
775bp
unknown/
0bp
UniRef50_P24081 (51%/258)
Cluster: Putative alkaline exonuclease; n=15; Nucleopolyhedrovirus|Rep: Putative alkaline exonuclease - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0016787 F hydrolase activity
GO:0005622 C intracellular anatomical structure
GO:0006916 P negative regulation of apoptotic process
12975 rbmnc17m19
444bp
unknown/
0bp
UniRef50_P24647 (70%/140)
Cluster: Immediate-early regulatory protein IE-N; n=4; Nucleopolyhedrovirus|Rep: Immediate-early regulatory protein IE-N - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
12976 rbmnc17m20
805bp
unknown/
0bp
UniRef50_Q90173 (90%/237)
Cluster: Zinc finger protein CG30; n=5; Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 - Bombyx mori nuclear polyhedrosis virus (BmNPV)
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
12977 rbmnc17m21
771bp
unknown/
0bp
UniRef50_P24081 (51%/254)
Cluster: Putative alkaline exonuclease; n=15; Nucleopolyhedrovirus|Rep: Putative alkaline exonuclease - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0016787 F hydrolase activity
GO:0005622 C intracellular anatomical structure
GO:0006916 P negative regulation of apoptotic process
12978 rbmnc17m22
792bp
unknown/
0bp
UniRef50_Q4JSC0 (90%/177)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
12979 rbmnc17m23
519bp
unknown/
0bp
UniRef50_Q86TM6 (31%/124)
Cluster: E3 ubiquitin-protein ligase synoviolin precursor; n=21; Euteleostomi|Rep: E3 ubiquitin-protein ligase synoviolin precursor - Homo sapiens (Human)
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0006512 P obsolete ubiquitin cycle
GO:0006950 P response to stress
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0016881 F acid-amino acid ligase activity
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0046872 F metal ion binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0030288 C outer membrane-bounded periplasmic space
12980 rbmnc17n01
173bp
unknown/
0bp
UniRef50_P11042 (86%/52)
Cluster: Early 39 kDa protein; n=5; Nucleopolyhedrovirus|Rep: Early 39 kDa protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0003677 F DNA binding
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005694 C chromosome
GO:0006265 P DNA topological change
GO:0006268 P DNA unwinding involved in DNA replication
GO:0016853 F isomerase activity
12981 rbmnc17n02
753bp
unknown/
0bp
UniRef50_P23396 (86%/226)
Cluster: 40S ribosomal protein S3; n=174; Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
12982 rbmnc17n03
596bp
unknown/
0bp
UniRef50_Q5CCL6 (93%/153)
Cluster: P23-like protein; n=1; Bombyx mori|Rep: P23-like protein - Bombyx mori (Silk moth)
12983 rbmnc17n04
378bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
12984 rbmnc17n05
895bp
unknown/
0bp
UniRef50_P11138 (91%/250)
Cluster: Trans-activating transcriptional regulatory protein; n=11; Nucleopolyhedrovirus|Rep: Trans-activating transcriptional regulatory protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
12985 rbmnc17n06
425bp
unknown/
0bp
UniRef50_P17704 (88%/103)
Cluster: 40S ribosomal protein S17; n=63; Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
12986 rbmnc17n07
845bp
unknown/
0bp
UniRef50_Q2F636 (99%/255)
Cluster: Acyl-CoA binding protein; n=1; Bombyx mori|Rep: Acyl-CoA binding protein - Bombyx mori (Silk moth)
GO:0000062 F fatty-acyl-CoA binding
GO:0005488 F binding
12987 rbmnc17n08
864bp
unknown/
0bp
UniRef50_P24745 (88%/277)
Cluster: Uncharacterized 38.0 kDa protein in P143-LEF5 intergenic region; n=12; Nucleopolyhedrovirus|Rep: Uncharacterized 38.0 kDa protein in P143-LEF5 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12988 rbmnc17n09
858bp
unknown/
0bp
UniRef50_Q9VLU5 (51%/224)
Cluster: WW domain-containing oxidoreductase; n=8; Endopterygota|Rep: WW domain-containing oxidoreductase - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0010212 P response to ionizing radiation
GO:0016491 F oxidoreductase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0006118 P obsolete electron transport
GO:0007049 P cell cycle
GO:0008202 P steroid metabolic process
GO:0045786 P negative regulation of cell cycle
GO:0046983 F protein dimerization activity
GO:0048037 F obsolete cofactor binding
GO:0050662 F obsolete coenzyme binding
12989 rbmnc17n10
605bp
unknown/
0bp
UniRef50_P41432 (85%/173)
Cluster: Uncharacterized 20.4 kDa protein in IAP1-SOD intergenic region; n=4; Nucleopolyhedrovirus|Rep: Uncharacterized 20.4 kDa protein in IAP1-SOD intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12990 rbmnc17n11
806bp
unknown/
0bp
UniRef50_Q8T8R1 (62%/90)
Cluster: GM14667p; n=8; Neoptera|Rep: GM14667p - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
previous next from show/20635

- SilkBase 1999-2023 -