SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/20635
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
12691 rbmnc16p09
550bp
unknown/
0bp
UniRef50_Q7RJC6 (97%/71)
Cluster: Ubiquitin; n=1; Plasmodium yoelii yoelii|Rep: Ubiquitin - Plasmodium yoelii yoelii
GO:0006464 P cellular protein modification process
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0016032 P viral process
GO:0019082 P viral protein processing
12692 rbmnc16p11
584bp
unknown/
0bp
UniRef50_UPI0000D55F1F (60%/53)
Cluster: PREDICTED: similar to CG33113-PF, isoform F; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG33113-PF, isoform F - Tribolium castaneum
GO:0005783 C endoplasmic reticulum
12693 rbmnc16p13
827bp
unknown/
0bp
UniRef50_Q960M4 (64%/71)
Cluster: LD45324p; n=7; cellular organisms|Rep: LD45324p - Drosophila melanogaster (Fruit fly)
GO:0016491 F oxidoreductase activity
GO:0004601 F peroxidase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0006954 P inflammatory response
GO:0006979 P response to oxidative stress
GO:0016209 F antioxidant activity
GO:0051920 F peroxiredoxin activity
12694 rbmnc16p16
324bp
unknown/
0bp
UniRef50_Q29JI3 (48%/41)
Cluster: GA12989-PA; n=1; Drosophila pseudoobscura|Rep: GA12989-PA - Drosophila pseudoobscura (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
12695 rbmnc16p17
247bp
unknown/
0bp
UniRef50_P16709 (100%/68)
Cluster: Ubiquitin-like protein precursor; n=19; root|Rep: Ubiquitin-like protein precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005634 C nucleus
GO:0006464 P cellular protein modification process
GO:0006512 P obsolete ubiquitin cycle
GO:0019028 C viral capsid
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0016032 P viral process
GO:0019082 P viral protein processing
12696 rbmnc16p18
769bp
unknown/
0bp
UniRef50_UPI00015B5AA9 (50%/186)
Cluster: PREDICTED: similar to GA17982-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to GA17982-PA - Nasonia vitripennis
GO:0005488 F binding
GO:0005215 F transporter activity
GO:0005501 F retinoid binding
GO:0006810 P transport
12697 rbmnc16p19
854bp
unknown/
0bp
UniRef50_P25695 (97%/158)
Cluster: Uncharacterized 41.5 kDa protein in P6.9-VP48 intergenic region; n=13; Nucleopolyhedrovirus|Rep: Uncharacterized 41.5 kDa protein in P6.9-VP48 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12698 rbmnc16p20
722bp
unknown/
0bp
UniRef50_Q06692 (98%/88)
Cluster: UPF0213 protein in VLF1-GP41 intergenic region; n=12; Nucleopolyhedrovirus|Rep: UPF0213 protein in VLF1-GP41 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0004518 F nuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006281 P DNA repair
12699 rbmnc16p21
369bp
unknown/
0bp
UniRef50_P11040 (91%/81)
Cluster: ECORI-T site protein ETS; n=5; Nucleopolyhedrovirus|Rep: ECORI-T site protein ETS - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0051301 P cell division
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
12700 rbmnc16p22
628bp
unknown/
0bp
UniRef50_P36241 (69%/195)
Cluster: 60S ribosomal protein L19; n=141; Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
12701 rbmnc16p23
271bp
unknown/
0bp
UniRef50_Q96IX5 (46%/47)
Cluster: Up-regulated during skeletal muscle growth protein 5; n=9; Euteleostomi|Rep: Up-regulated during skeletal muscle growth protein 5 - Homo sapiens (Human)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005515 F protein binding
GO:0030529 C ribonucleoprotein complex
12702 rbmnc16p24
744bp
unknown/
0bp
UniRef50_P08865 (68%/193)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
12703 rbmnc17a01
723bp
unknown/
0bp
UniRef50_O10372 (65%/223)
Cluster: Occlusion-derived virus envelope protein E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E27 - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0019031 C viral envelope
12704 rbmnc17a02
853bp
unknown/
0bp
UniRef50_Q7JR58 (67%/257)
Cluster: LD24265p; n=4; Endopterygota|Rep: LD24265p - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0005811 C lipid droplet
GO:0008152 P metabolic process
GO:0004300 F enoyl-CoA hydratase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0016829 F lyase activity
GO:0016853 F isomerase activity
12705 rbmnc17a04
397bp
unknown/
0bp
UniRef50_Q8IEM9 (36%/52)
Cluster: Putative uncharacterized protein MAL13P1.41; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein MAL13P1.41 - Plasmodium falciparum (isolate 3D7)
12706 rbmnc17a05
822bp
unknown/
0bp
UniRef50_Q06694 (81%/212)
Cluster: Uncharacterized 26.9 kDa protein in GP41-PNK intergenic region; n=11; Nucleopolyhedrovirus|Rep: Uncharacterized 26.9 kDa protein in GP41-PNK intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12707 rbmnc17a06
850bp
unknown/
0bp
UniRef50_P24730 (89%/220)
Cluster: Uncharacterized 25.1 kDa protein in PP34-EXO intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 25.1 kDa protein in PP34-EXO intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12708 rbmnc17a07
378bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
12709 rbmnc17a08
791bp
unknown/
0bp
UniRef50_Q99LT6 (83%/215)
Cluster: Eef2 protein; n=26; Eukaryota|Rep: Eef2 protein - Mus musculus (Mouse)
GO:0005525 F GTP binding
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0045335 C phagocytic vesicle
12710 rbmnc17a09
740bp
unknown/
0bp
UniRef50_Q9VGS2 (79%/171)
Cluster: Translationally-controlled tumor protein homolog; n=28; Fungi/Metazoa group|Rep: Translationally-controlled tumor protein homolog - Drosophila melanogaster (Fruit fly)
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0045298 C tubulin complex
GO:0005615 C extracellular space
GO:0005771 C multivesicular body
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0006916 P negative regulation of apoptotic process
GO:0042981 P regulation of apoptotic process
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0007276 P gamete generation
GO:0007626 P locomotory behavior
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040010 P positive regulation of growth rate
12711 rbmnc17a10
778bp
unknown/
0bp
UniRef50_P11142 (75%/208)
Cluster: Heat shock cognate 71 kDa protein; n=239; Eukaryota|Rep: Heat shock cognate 71 kDa protein - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0006950 P response to stress
GO:0006986 P response to unfolded protein
GO:0009986 C cell surface
GO:0042623 F ATP hydrolysis activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006402 P mRNA catabolic process
GO:0006916 P negative regulation of apoptotic process
GO:0051082 F unfolded protein binding
GO:0005509 F calcium ion binding
GO:0005788 C endoplasmic reticulum lumen
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0006983 P ER overload response
GO:0008303 C caspase complex
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030674 F protein-macromolecule adaptor activity
GO:0043022 F ribosome binding
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0048471 C perinuclear region of cytoplasm
12712 rbmnc17a11
707bp
unknown/
0bp
UniRef50_A0MNZ0 (87%/16)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
12713 rbmnc17a12
822bp
unknown/
0bp
UniRef50_Q06692 (98%/88)
Cluster: UPF0213 protein in VLF1-GP41 intergenic region; n=12; Nucleopolyhedrovirus|Rep: UPF0213 protein in VLF1-GP41 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0004518 F nuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006281 P DNA repair
GO:0005198 F structural molecule activity
GO:0019012 C virion component
12714 rbmnc17a13
588bp
unknown/
0bp
UniRef50_P41432 (82%/172)
Cluster: Uncharacterized 20.4 kDa protein in IAP1-SOD intergenic region; n=4; Nucleopolyhedrovirus|Rep: Uncharacterized 20.4 kDa protein in IAP1-SOD intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12715 rbmnc17a14
808bp
unknown/
0bp
UniRef50_Q90173 (94%/240)
Cluster: Zinc finger protein CG30; n=5; Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 - Bombyx mori nuclear polyhedrosis virus (BmNPV)
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
12716 rbmnc17a15
460bp
unknown/
0bp
UniRef50_P46776 (49%/143)
Cluster: 60S ribosomal protein L27a; n=204; Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
12717 rbmnc17a16
414bp
unknown/
0bp
UniRef50_Q06669 (79%/127)
Cluster: Uncharacterized 15.5 kDa protein in IAP2-VLF1 intergenic region; n=7; Nucleopolyhedrovirus|Rep: Uncharacterized 15.5 kDa protein in IAP2-VLF1 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12718 rbmnc17a17
358bp
unknown/
0bp
UniRef50_Q5MGF5 (52%/74)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
GO:0005737 C cytoplasm
12719 rbmnc17a18
815bp
unknown/
0bp
UniRef50_Q90173 (91%/240)
Cluster: Zinc finger protein CG30; n=5; Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 - Bombyx mori nuclear polyhedrosis virus (BmNPV)
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
12720 rbmnc17a19
815bp
unknown/
0bp
UniRef50_Q06694 (81%/208)
Cluster: Uncharacterized 26.9 kDa protein in GP41-PNK intergenic region; n=11; Nucleopolyhedrovirus|Rep: Uncharacterized 26.9 kDa protein in GP41-PNK intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
previous next from show/20635

- SilkBase 1999-2023 -