SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/20635
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
12661 rbmnc16o01
126bp
unknown/
0bp
(no hit)
12662 rbmnc16o02
309bp
unknown/
0bp
UniRef50_P63220 (71%/78)
Cluster: 40S ribosomal protein S21; n=8; Bilateria|Rep: 40S ribosomal protein S21 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0043022 F ribosome binding
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0005515 F protein binding
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
12663 rbmnc16o03
808bp
unknown/
0bp
UniRef50_O10269 (69%/249)
Cluster: Serine/threonine-protein kinase 1; n=14; Nucleopolyhedrovirus|Rep: Serine/threonine-protein kinase 1 - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
12664 rbmnc16o04
371bp
unknown/
0bp
UniRef50_Q0ZD84 (76%/109)
Cluster: Ribosomal protein S26; n=9; Coelomata|Rep: Ribosomal protein S26 - Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
12665 rbmnc16o05
743bp
unknown/
0bp
UniRef50_P41677 (86%/195)
Cluster: Late expression factor 7; n=5; Nucleopolyhedrovirus|Rep: Late expression factor 7 - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
12666 rbmnc16o06
806bp
unknown/
0bp
UniRef50_Q8T8R1 (55%/158)
Cluster: GM14667p; n=8; Neoptera|Rep: GM14667p - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
12667 rbmnc16o07
811bp
unknown/
0bp
UniRef50_P41677 (92%/139)
Cluster: Late expression factor 7; n=5; Nucleopolyhedrovirus|Rep: Late expression factor 7 - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0000272 P polysaccharide catabolic process
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005783 C endoplasmic reticulum
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0043169 F cation binding
12668 rbmnc16o08
457bp
unknown/
0bp
UniRef50_P83731 (61%/100)
Cluster: 60S ribosomal protein L24; n=72; Fungi/Metazoa group|Rep: 60S ribosomal protein L24 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0007275 P multicellular organism development
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
12669 rbmnc16o09
759bp
unknown/
0bp
UniRef50_P41423 (93%/235)
Cluster: Uncharacterized 38.7 kDa protein in PK1-LEF1 intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 38.7 kDa protein in PK1-LEF1 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12670 rbmnc16o10
372bp
unknown/
0bp
UniRef50_Q0ZD84 (75%/108)
Cluster: Ribosomal protein S26; n=9; Coelomata|Rep: Ribosomal protein S26 - Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
12671 rbmnc16o11
834bp
unknown/
0bp
UniRef50_Q1LDE8 (33%/57)
Cluster: Histidine kinase precursor; n=1; Ralstonia metallidurans CH34|Rep: Histidine kinase precursor - Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GO:0000155 F phosphorelay sensor kinase activity
GO:0000156 F phosphorelay response regulator activity
GO:0000160 P phosphorelay signal transduction system
GO:0004673 F protein histidine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
12672 rbmnc16o12
779bp
unknown/
0bp
UniRef50_P24728 (82%/105)
Cluster: Polyhedral envelope protein; n=6; Nucleopolyhedrovirus|Rep: Polyhedral envelope protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005198 F structural molecule activity
GO:0019012 C virion component
GO:0019028 C viral capsid
GO:0019031 C viral envelope
12673 rbmnc16o13
519bp
unknown/
0bp
UniRef50_P62841 (78%/147)
Cluster: 40S ribosomal protein S15; n=46; cellular organisms|Rep: 40S ribosomal protein S15 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000056 P ribosomal small subunit export from nucleus
GO:0005737 C cytoplasm
GO:0042254 P ribosome biogenesis
GO:0003723 F RNA binding
GO:0019843 F rRNA binding
12674 rbmnc16o14
794bp
unknown/
0bp
UniRef50_O10348 (56%/186)
Cluster: Uncharacterized 44.3 kDa protein; n=14; Nucleopolyhedrovirus|Rep: Uncharacterized 44.3 kDa protein - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
12675 rbmnc16o15
467bp
unknown/
0bp
UniRef50_P41482 (81%/123)
Cluster: Uncharacterized 13.3 kDa protein in P6.9-VP48 intergenic region; n=7; Nucleopolyhedrovirus|Rep: Uncharacterized 13.3 kDa protein in P6.9-VP48 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12676 rbmnc16o16
784bp
unknown/
0bp
UniRef50_Q5LDS2 (41%/39)
Cluster: Putative transmembrane protein; n=1; Bacteroides fragilis NCTC 9343|Rep: Putative transmembrane protein - Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
GO:0016021 C integral component of membrane
GO:0006118 P obsolete electron transport
GO:0009055 F electron transfer activity
GO:0003824 F catalytic activity
GO:0003856 F 3-dehydroquinate synthase activity
GO:0003866 F 3-phosphoshikimate 1-carboxyvinyltransferase activity
GO:0004765 F shikimate kinase activity
GO:0005524 F ATP binding
GO:0008152 P metabolic process
GO:0009073 P aromatic amino acid family biosynthetic process
GO:0016765 F transferase activity, transferring alkyl or aryl (other than methyl) groups
12677 rbmnc16o17
786bp
unknown/
0bp
UniRef50_P52813 (76%/215)
Cluster: 40S ribosomal protein S3a; n=17; Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005843 C cytosolic small ribosomal subunit
GO:0006413 P translational initiation
GO:0006917 P apoptotic process
12678 rbmnc16o18
378bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
12679 rbmnc16o19
806bp
unknown/
0bp
UniRef50_P17501 (96%/268)
Cluster: Major envelope glycoprotein precursor; n=21; Nucleopolyhedrovirus|Rep: Major envelope glycoprotein precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019031 C viral envelope
GO:0019048 P modulation by virus of host process
12680 rbmnc16o20
708bp
unknown/
0bp
UniRef50_P41425 (91%/24)
Cluster: Uncharacterized 8.0 kDa protein in EGT-IAP1 intergenic region; n=1; Autographa californica nucleopolyhedrovirus|Rep: Uncharacterized 8.0 kDa protein in EGT-IAP1 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
12681 rbmnc16o21
370bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
12682 rbmnc16o22
761bp
unknown/
0bp
UniRef50_P62753 (73%/232)
Cluster: 40S ribosomal protein S6; n=203; Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0042593 P glucose homeostasis
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0006334 P nucleosome assembly
12683 rbmnc16o23
697bp
unknown/
0bp
UniRef50_O96233 (27%/139)
Cluster: Putative uncharacterized protein PFB0700c; n=2; Plasmodium|Rep: Putative uncharacterized protein PFB0700c - Plasmodium falciparum (isolate 3D7)
12684 rbmnc16o24
311bp
unknown/
0bp
UniRef50_Q16H14 (62%/88)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0043022 F ribosome binding
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0005515 F protein binding
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
12685 rbmnc16p01
457bp
unknown/
0bp
UniRef50_P55828 (86%/112)
Cluster: 40S ribosomal protein S20; n=28; Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0005829 C cytosol
12686 rbmnc16p02
611bp
unknown/
0bp
UniRef50_Q95V82 (79%/119)
Cluster: Cytochrome c oxidase subunit Va; n=2; Neoptera|Rep: Cytochrome c oxidase subunit Va - Rhyzopertha dominica (Lesser grain borer)
GO:0004129 F cytochrome-c oxidase activity
GO:0006118 P obsolete electron transport
GO:0016491 F oxidoreductase activity
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0016020 C membrane
GO:0046872 F metal ion binding
GO:0005743 C mitochondrial inner membrane
GO:0009055 F electron transfer activity
GO:0002119 P nematode larval development
GO:0007276 P gamete generation
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
12687 rbmnc16p03
372bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
12688 rbmnc16p04
457bp
unknown/
0bp
UniRef50_P55828 (86%/112)
Cluster: 40S ribosomal protein S20; n=28; Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0005829 C cytosol
12689 rbmnc16p05
839bp
unknown/
0bp
UniRef50_Q5UAT5 (90%/241)
Cluster: 60S ribosomal protein L6; n=15; Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori (Silk moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0006355 P regulation of transcription, DNA-templated
12690 rbmnc16p08
826bp
unknown/
0bp
UniRef50_P25695 (97%/148)
Cluster: Uncharacterized 41.5 kDa protein in P6.9-VP48 intergenic region; n=13; Nucleopolyhedrovirus|Rep: Uncharacterized 41.5 kDa protein in P6.9-VP48 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
previous next from show/20635

- SilkBase 1999-2023 -