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Last updated: 2022/11/18
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No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
11641 rbmnc13o20
739bp
unknown/
0bp
UniRef50_Q06906 (59%/199)
Cluster: Occlusion-derived virus envelope protein E25; n=14; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E25 - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0005634 C nucleus
GO:0019012 C virion component
GO:0019031 C viral envelope
GO:0042025 C host cell nucleus
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006260 P DNA replication
GO:0016787 F hydrolase activity
GO:0019079 P viral genome replication
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0008287 C protein serine/threonine phosphatase complex
GO:0015071 F protein serine/threonine phosphatase activity
GO:0046872 F metal ion binding
11642 rbmnc13o21
654bp
unknown/
0bp
UniRef50_Q06692 (98%/88)
Cluster: UPF0213 protein in VLF1-GP41 intergenic region; n=12; Nucleopolyhedrovirus|Rep: UPF0213 protein in VLF1-GP41 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0004518 F nuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006281 P DNA repair
11643 rbmnc13o22
378bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
11644 rbmnc13o24
665bp
unknown/
0bp
UniRef50_UPI0000D55574 (37%/152)
Cluster: PREDICTED: similar to CG30181-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG30181-PA - Tribolium castaneum
GO:0005272 F sodium channel activity
GO:0006814 P sodium ion transport
GO:0016020 C membrane
GO:0008049 P male courtship behavior
GO:0019236 P response to pheromone
11645 rbmnc13p02
468bp
unknown/
0bp
UniRef50_P99027 (63%/69)
Cluster: 60S acidic ribosomal protein P2; n=85; Eukaryota|Rep: 60S acidic ribosomal protein P2 - Mus musculus (Mouse)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
11646 rbmnc13p03
747bp
unknown/
0bp
UniRef50_Q0N3Z7 (58%/236)
Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: BRO-B - Clanis bilineata nucleopolyhedrosis virus
11647 rbmnc13p04
854bp
unknown/
0bp
UniRef50_Q6Z471 (47%/40)
Cluster: Putative uncharacterized protein P0430F03.36; n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein P0430F03.36 - Oryza sativa subsp. japonica (Rice)
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
11648 rbmnc13p05
166bp
unknown/
0bp
UniRef50_P41473 (67%/52)
Cluster: Uncharacterized 30.6 kDa protein in IAP2-VLF1 intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 30.6 kDa protein in IAP2-VLF1 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11649 rbmnc13p06
249bp
unknown/
0bp
UniRef50_P16709 (100%/73)
Cluster: Ubiquitin-like protein precursor; n=19; root|Rep: Ubiquitin-like protein precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005634 C nucleus
GO:0006464 P cellular protein modification process
GO:0006512 P obsolete ubiquitin cycle
GO:0019028 C viral capsid
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0016032 P viral process
GO:0019082 P viral protein processing
11650 rbmnc13p07
788bp
unknown/
0bp
UniRef50_P41460 (94%/78)
Cluster: Uncharacterized 9.9 kDa protein in LEF8-FP intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 9.9 kDa protein in LEF8-FP intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11651 rbmnc13p09
801bp
unknown/
0bp
UniRef50_Q6AW70 (94%/118)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
GO:0019012 C virion component
11652 rbmnc13p10
813bp
unknown/
0bp
UniRef50_P00850 (51%/98)
Cluster: ATP synthase a chain; n=75; Panarthropoda|Rep: ATP synthase a chain - Drosophila melanogaster (Fruit fly)
GO:0005739 C mitochondrion
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008553 F P-type proton-exporting transporter activity
GO:0015078 F proton transmembrane transporter activity
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
11653 rbmnc13p11
455bp
unknown/
0bp
UniRef50_UPI0000D57608 (44%/118)
Cluster: PREDICTED: similar to Ligatin; n=1; Tribolium castaneum|Rep: PREDICTED: similar to Ligatin - Tribolium castaneum
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0004872 F signaling receptor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006413 P translational initiation
GO:0006886 P intracellular protein transport
GO:0016020 C membrane
11654 rbmnc13p12
551bp
unknown/
0bp
UniRef50_Q7RJC6 (97%/71)
Cluster: Ubiquitin; n=1; Plasmodium yoelii yoelii|Rep: Ubiquitin - Plasmodium yoelii yoelii
GO:0006464 P cellular protein modification process
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0016032 P viral process
GO:0019082 P viral protein processing
11655 rbmnc13p13
784bp
unknown/
0bp
UniRef50_UPI0000D55DB2 (45%/116)
Cluster: PREDICTED: similar to Protein sprouty (Spry); n=1; Tribolium castaneum|Rep: PREDICTED: similar to Protein sprouty (Spry) - Tribolium castaneum
GO:0007275 P multicellular organism development
GO:0009966 P regulation of signal transduction
GO:0016020 C membrane
GO:0001745 P compound eye morphogenesis
GO:0001763 P morphogenesis of a branching structure
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007424 P open tracheal system development
GO:0007429 P secondary branching, open tracheal system
GO:0007430 P terminal branching, open tracheal system
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0009968 P negative regulation of signal transduction
GO:0016318 P ommatidial rotation
GO:0030707 P ovarian follicle cell development
GO:0035155 P negative regulation of terminal cell fate specification, open tracheal system
GO:0040037 P negative regulation of fibroblast growth factor receptor signaling pathway
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0045314 P regulation of compound eye photoreceptor development
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0007605 P sensory perception of sound
GO:0009887 P animal organ morphogenesis
GO:0030324 P lung development
GO:0042472 P inner ear morphogenesis
GO:0043407 P negative regulation of MAP kinase activity
GO:0045165 P cell fate commitment
GO:0048754 P branching morphogenesis of an epithelial tube
11656 rbmnc13p14
804bp
unknown/
0bp
UniRef50_P21287 (96%/132)
Cluster: Uncharacterized 24.8 kDa protein in FGF-VUBI intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 24.8 kDa protein in FGF-VUBI intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11657 rbmnc13p16
465bp
unknown/
0bp
UniRef50_P08570 (62%/112)
Cluster: 60S acidic ribosomal protein P1; n=15; Eukaryota|Rep: 60S acidic ribosomal protein P1 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
11658 rbmnc13p18
390bp
unknown/
0bp
UniRef50_O10354 (68%/124)
Cluster: Uncharacterized 22.1 kDa protein; n=13; Nucleopolyhedrovirus|Rep: Uncharacterized 22.1 kDa protein - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
11659 rbmnc13p19
717bp
unknown/
0bp
UniRef50_Q0N3Z7 (66%/253)
Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: BRO-B - Clanis bilineata nucleopolyhedrosis virus
11660 rbmnc13p20
682bp
unknown/
0bp
UniRef50_P41473 (88%/140)
Cluster: Uncharacterized 30.6 kDa protein in IAP2-VLF1 intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 30.6 kDa protein in IAP2-VLF1 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0008704 F 5-carboxymethyl-2-hydroxymuconate delta-isomerase activity
GO:0016853 F isomerase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0016020 C membrane
11661 rbmnc13p21
179bp
unknown/
0bp
UniRef50_P41481 (65%/46)
Cluster: P18 protein; n=12; Nucleopolyhedrovirus|Rep: P18 protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11662 rbmnc13p22
408bp
unknown/
0bp
UniRef50_Q5MGF5 (58%/58)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
GO:0004219 F obsolete pyroglutamyl-peptidase I activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
11663 rbmnc13p23
392bp
unknown/
0bp
UniRef50_P49207 (61%/107)
Cluster: 60S ribosomal protein L34; n=62; Fungi/Metazoa group|Rep: 60S ribosomal protein L34 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005737 C cytoplasm
11664 rbmnc13p24
690bp
unknown/
0bp
UniRef50_P21953 (63%/211)
Cluster: 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial precursor; n=84; cellular organisms|Rep: 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial precursor - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0003863 F 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005947 C mitochondrial alpha-ketoglutarate dehydrogenase complex
GO:0008152 P metabolic process
GO:0009083 P branched-chain amino acid catabolic process
GO:0016491 F oxidoreductase activity
GO:0016831 F carboxy-lyase activity
11665 rbmnc14a01
757bp
unknown/
0bp
UniRef50_Q06906 (59%/196)
Cluster: Occlusion-derived virus envelope protein E25; n=14; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E25 - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0005634 C nucleus
GO:0019012 C virion component
GO:0019031 C viral envelope
GO:0042025 C host cell nucleus
GO:0000155 F phosphorelay sensor kinase activity
GO:0000160 P phosphorelay signal transduction system
GO:0004673 F protein histidine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
11666 rbmnc14a02
502bp
unknown/
0bp
UniRef50_Q7PZX9 (68%/157)
Cluster: ENSANGP00000014054; n=2; Culicidae|Rep: ENSANGP00000014054 - Anopheles gambiae str. PEST
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005737 C cytoplasm
11667 rbmnc14a03
613bp
unknown/
0bp
UniRef50_P46781 (89%/176)
Cluster: 40S ribosomal protein S9; n=181; Eukaryota|Rep: 40S ribosomal protein S9 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0015935 C small ribosomal subunit
11668 rbmnc14a04
834bp
unknown/
0bp
UniRef50_P11042 (89%/266)
Cluster: Early 39 kDa protein; n=5; Nucleopolyhedrovirus|Rep: Early 39 kDa protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11669 rbmnc14a05
634bp
unknown/
0bp
UniRef50_Q9VNE9 (58%/200)
Cluster: 60S ribosomal protein L13A; n=127; Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0007219 P Notch signaling pathway
GO:0008407 P chaeta morphogenesis
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
11670 rbmnc14a06
372bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
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