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Last updated: 2022/11/18
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No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
11131 rbmnc12h12
512bp
unknown/
0bp
UniRef50_Q4GXT1 (74%/158)
Cluster: Ribosomal protein S10e; n=3; Fungi/Metazoa group|Rep: Ribosomal protein S10e - Agriotes lineatus (Lined click beetle)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
11132 rbmnc12h13
868bp
unknown/
0bp
UniRef50_Q06694 (81%/212)
Cluster: Uncharacterized 26.9 kDa protein in GP41-PNK intergenic region; n=11; Nucleopolyhedrovirus|Rep: Uncharacterized 26.9 kDa protein in GP41-PNK intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11133 rbmnc12h14
372bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
11134 rbmnc12h15
898bp
unknown/
0bp
UniRef50_P41423 (94%/288)
Cluster: Uncharacterized 38.7 kDa protein in PK1-LEF1 intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 38.7 kDa protein in PK1-LEF1 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0016740 F transferase activity
11135 rbmnc12h16
925bp
unknown/
0bp
UniRef50_UPI0000D55F2F (47%/146)
Cluster: PREDICTED: similar to beta-tubulin cofactor C; n=1; Tribolium castaneum|Rep: PREDICTED: similar to beta-tubulin cofactor C - Tribolium castaneum
11136 rbmnc12h17
372bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
11137 rbmnc12h18
894bp
unknown/
0bp
UniRef50_O10372 (66%/266)
Cluster: Occlusion-derived virus envelope protein E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E27 - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0019031 C viral envelope
11138 rbmnc12h19
563bp
unknown/
0bp
UniRef50_Q07020 (60%/181)
Cluster: 60S ribosomal protein L18; n=124; Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
11139 rbmnc12h20
865bp
unknown/
0bp
UniRef50_Q06KR1 (55%/145)
Cluster: Baculovirus repeated ORF-a; n=6; Nucleopolyhedrovirus|Rep: Baculovirus repeated ORF-a - Anticarsia gemmatalis nuclear polyhedrosis virus (AgMNPV)
11140 rbmnc12h21
879bp
unknown/
0bp
UniRef50_P41718 (51%/250)
Cluster: Occlusion-derived virus envelope protein E56; n=21; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E56 - Choristoneura fumiferana nuclear polyhedrosis virus (CfMNPV)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019012 C virion component
GO:0019031 C viral envelope
11141 rbmnc12h23
818bp
unknown/
0bp
UniRef50_P05141 (78%/238)
Cluster: ADP/ATP translocase 2; n=61; Eukaryota|Rep: ADP/ATP translocase 2 - Homo sapiens (Human)
GO:0005215 F transporter activity
GO:0005488 F binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0015207 F adenine transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0000002 P mitochondrial genome maintenance
GO:0006091 P generation of precursor metabolites and energy
GO:0006839 P mitochondrial transport
GO:0005471 F ATP:ADP antiporter activity
GO:0005515 F protein binding
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006915 P apoptotic process
11142 rbmnc12h24
371bp
unknown/
0bp
UniRef50_Q0ZD84 (75%/108)
Cluster: Ribosomal protein S26; n=9; Coelomata|Rep: Ribosomal protein S26 - Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
11143 rbmnc12i01
719bp
unknown/
0bp
UniRef50_Q8ITS7 (57%/99)
Cluster: Heat shock-like protein; n=1; Galleria mellonella|Rep: Heat shock-like protein - Galleria mellonella (Wax moth)
GO:0006950 P response to stress
11144 rbmnc12i02
561bp
unknown/
0bp
UniRef50_Q07020 (60%/181)
Cluster: 60S ribosomal protein L18; n=124; Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
11145 rbmnc12i03
362bp
unknown/
0bp
UniRef50_P62857 (78%/51)
Cluster: 40S ribosomal protein S28; n=137; Eukaryota|Rep: 40S ribosomal protein S28 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005829 C cytosol
GO:0005830 C cytosolic ribosome
11146 rbmnc12i04
620bp
unknown/
0bp
UniRef50_P41672 (70%/70)
Cluster: Uncharacterized 59.7 kDa protein in HE65-PK2 intergenic region precursor; n=12; Nucleopolyhedrovirus|Rep: Uncharacterized 59.7 kDa protein in HE65-PK2 intergenic region precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11147 rbmnc12i05
847bp
unknown/
0bp
UniRef50_A1XDB3 (82%/17)
Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0019028 C viral capsid
GO:0030246 F carbohydrate binding
GO:0030247 F polysaccharide binding
GO:0006812 P cation transport
GO:0008324 F cation transmembrane transporter activity
GO:0016021 C integral component of membrane
11148 rbmnc12i07
833bp
unknown/
0bp
UniRef50_P41453 (85%/227)
Cluster: Late expression factor 3; n=5; Nucleopolyhedrovirus|Rep: Late expression factor 3 - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0003677 F DNA binding
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0045449 P regulation of transcription, DNA-templated
11149 rbmnc12i08
875bp
unknown/
0bp
UniRef50_Q0N3Z7 (58%/275)
Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: BRO-B - Clanis bilineata nucleopolyhedrosis virus
11150 rbmnc12i09
436bp
unknown/
0bp
UniRef50_Q9NPE3 (69%/63)
Cluster: H/ACA ribonucleoprotein complex subunit 3; n=25; Eukaryota|Rep: H/ACA ribonucleoprotein complex subunit 3 - Homo sapiens (Human)
GO:0001522 P pseudouridine synthesis
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0006364 P rRNA processing
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0005515 F protein binding
11151 rbmnc12i10
571bp
unknown/
0bp
UniRef50_UPI0000DA28E1 (28%/89)
Cluster: PREDICTED: similar to glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein; n=1; Rattus norvegicus|Rep: PREDICTED: similar to glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein - Rattus norvegicus
11152 rbmnc12i11
922bp
unknown/
0bp
UniRef50_O10370 (76%/251)
Cluster: Uncharacterized 55.8 kDa protein; n=13; Nucleopolyhedrovirus|Rep: Uncharacterized 55.8 kDa protein - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
11153 rbmnc12i12
870bp
unknown/
0bp
UniRef50_A4FSG8 (66%/53)
Cluster: Putative uncharacterized protein; n=1; Thermobia domestica|Rep: Putative uncharacterized protein - Thermobia domestica (firebrat)
11154 rbmnc12i13
704bp
unknown/
0bp
UniRef50_P41679 (82%/233)
Cluster: Uncharacterized 28.5 kDa protein in PK2-LEF7 intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 28.5 kDa protein in PK2-LEF7 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0001584 F obsolete rhodopsin-like receptor activity
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0004872 F signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007596 P blood coagulation
GO:0009611 P response to wounding
GO:0015057 F thrombin-activated receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11155 rbmnc12i14
497bp
unknown/
0bp
UniRef50_P62277 (90%/132)
Cluster: 40S ribosomal protein S13; n=117; Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
11156 rbmnc12i15
653bp
unknown/
0bp
UniRef50_A6N9X3 (55%/182)
Cluster: Cytochrome c oxidase polyprotein IV; n=1; Ornithodoros parkeri|Rep: Cytochrome c oxidase polyprotein IV - Ornithodoros parkeri
GO:0004129 F cytochrome-c oxidase activity
GO:0006118 P obsolete electron transport
GO:0005515 F protein binding
11157 rbmnc12i16
859bp
unknown/
0bp
UniRef50_Q9VR89 (60%/245)
Cluster: RNA-binding protein pno1; n=25; Eukaryota|Rep: RNA-binding protein pno1 - Drosophila melanogaster (Fruit fly)
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006461 P protein-containing complex assembly
GO:0042254 P ribosome biogenesis
GO:0051082 F unfolded protein binding
GO:0000003 P reproduction
GO:0007276 P gamete generation
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040035 P hermaphrodite genitalia development
11158 rbmnc12i17
855bp
unknown/
0bp
(no hit)
11159 rbmnc12i18
489bp
unknown/
0bp
UniRef50_Q9VNB9 (65%/107)
Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0002119 P nematode larval development
GO:0007276 P gamete generation
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0018987 P water homeostasis
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040017 P positive regulation of locomotion
11160 rbmnc12i19
860bp
unknown/
0bp
UniRef50_Q8T8R1 (55%/158)
Cluster: GM14667p; n=8; Neoptera|Rep: GM14667p - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
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