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Last updated: 2022/11/18
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No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
11101 rbmnc12g02
776bp
unknown/
0bp
(no hit)
11102 rbmnc12g03
622bp
unknown/
0bp
UniRef50_P36241 (69%/195)
Cluster: 60S ribosomal protein L19; n=141; Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
11103 rbmnc12g04
372bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
11104 rbmnc12g05
630bp
unknown/
0bp
UniRef50_P36241 (68%/198)
Cluster: 60S ribosomal protein L19; n=141; Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
11105 rbmnc12g07
847bp
unknown/
0bp
UniRef50_Q06694 (81%/212)
Cluster: Uncharacterized 26.9 kDa protein in GP41-PNK intergenic region; n=11; Nucleopolyhedrovirus|Rep: Uncharacterized 26.9 kDa protein in GP41-PNK intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11106 rbmnc12g08
246bp
unknown/
0bp
UniRef50_P16709 (100%/76)
Cluster: Ubiquitin-like protein precursor; n=19; root|Rep: Ubiquitin-like protein precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005634 C nucleus
GO:0006464 P cellular protein modification process
GO:0006512 P obsolete ubiquitin cycle
GO:0019028 C viral capsid
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0016032 P viral process
GO:0019082 P viral protein processing
11107 rbmnc12g09
356bp
unknown/
0bp
UniRef50_P24730 (95%/64)
Cluster: Uncharacterized 25.1 kDa protein in PP34-EXO intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 25.1 kDa protein in PP34-EXO intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005198 F structural molecule activity
GO:0019012 C virion component
GO:0019028 C viral capsid
GO:0019031 C viral envelope
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0005515 F protein binding
GO:0009405 P obsolete pathogenesis
11108 rbmnc12g10
372bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
11109 rbmnc12g11
902bp
unknown/
0bp
UniRef50_O10372 (66%/288)
Cluster: Occlusion-derived virus envelope protein E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E27 - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0019031 C viral envelope
11110 rbmnc12g12
874bp
unknown/
0bp
UniRef50_Q7QJG3 (63%/205)
Cluster: ENSANGP00000019133; n=4; Eumetazoa|Rep: ENSANGP00000019133 - Anopheles gambiae str. PEST
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0000785 C chromatin
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006333 P chromatin assembly or disassembly
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
11111 rbmnc12g13
876bp
unknown/
0bp
UniRef50_Q0N3Z7 (58%/279)
Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: BRO-B - Clanis bilineata nucleopolyhedrosis virus
11112 rbmnc12g14
811bp
unknown/
0bp
UniRef50_P24728 (82%/98)
Cluster: Polyhedral envelope protein; n=6; Nucleopolyhedrovirus|Rep: Polyhedral envelope protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005198 F structural molecule activity
GO:0019012 C virion component
GO:0019028 C viral capsid
GO:0019031 C viral envelope
11113 rbmnc12g16
308bp
unknown/
0bp
UniRef50_Q1HQK5 (61%/60)
Cluster: Cytochrome c oxidase polypeptide VIIC; n=4; Endopterygota|Rep: Cytochrome c oxidase polypeptide VIIC - Aedes aegypti (Yellowfever mosquito)
GO:0004129 F cytochrome-c oxidase activity
GO:0006118 P obsolete electron transport
GO:0005739 C mitochondrion
GO:0006091 P generation of precursor metabolites and energy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
11114 rbmnc12g17
896bp
unknown/
0bp
UniRef50_P41718 (52%/267)
Cluster: Occlusion-derived virus envelope protein E56; n=21; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E56 - Choristoneura fumiferana nuclear polyhedrosis virus (CfMNPV)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019012 C virion component
GO:0019031 C viral envelope
11115 rbmnc12g18
848bp
unknown/
0bp
UniRef50_Q7KVW2 (39%/241)
Cluster: CG32763-PA; n=2; Drosophila melanogaster|Rep: CG32763-PA - Drosophila melanogaster (Fruit fly)
GO:0001682 P tRNA 5'-leader removal
GO:0004526 F ribonuclease P activity
GO:0006396 P RNA processing
GO:0000171 F ribonuclease MRP activity
GO:0000172 C ribonuclease MRP complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005655 C nucleolar ribonuclease P complex
GO:0008033 P tRNA processing
GO:0016078 P tRNA catabolic process
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
11116 rbmnc12g19
596bp
unknown/
0bp
UniRef50_P33514 (79%/187)
Cluster: 40S ribosomal protein S7; n=94; Eukaryota|Rep: 40S ribosomal protein S7 - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005843 C cytosolic small ribosomal subunit
GO:0005811 C lipid droplet
11117 rbmnc12g20
759bp
unknown/
0bp
UniRef50_Q06906 (60%/202)
Cluster: Occlusion-derived virus envelope protein E25; n=14; Nucleopolyhedrovirus|Rep: Occlusion-derived virus envelope protein E25 - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
GO:0005634 C nucleus
GO:0019012 C virion component
GO:0019031 C viral envelope
GO:0042025 C host cell nucleus
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0008287 C protein serine/threonine phosphatase complex
GO:0015071 F protein serine/threonine phosphatase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
11118 rbmnc12g21
355bp
unknown/
0bp
UniRef50_P62857 (78%/46)
Cluster: 40S ribosomal protein S28; n=137; Eukaryota|Rep: 40S ribosomal protein S28 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005829 C cytosol
11119 rbmnc12g22
373bp
unknown/
0bp
UniRef50_Q0GYC3 (77%/66)
Cluster: Putative uncharacterized protein; n=2; Nucleopolyhedrovirus|Rep: Putative uncharacterized protein - Plutella xylostella multiple nucleopolyhedrovirus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
11120 rbmnc12g24
221bp
unknown/
0bp
(no hit)
11121 rbmnc12h01
814bp
unknown/
0bp
UniRef50_O14579 (39%/248)
Cluster: Coatomer subunit epsilon; n=42; Eumetazoa|Rep: Coatomer subunit epsilon - Homo sapiens (Human)
GO:0005198 F structural molecule activity
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030126 C COPI vesicle coat
11122 rbmnc12h02
800bp
unknown/
0bp
UniRef50_P11042 (89%/265)
Cluster: Early 39 kDa protein; n=5; Nucleopolyhedrovirus|Rep: Early 39 kDa protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11123 rbmnc12h03
842bp
unknown/
0bp
UniRef50_Q6AW70 (95%/129)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
GO:0019012 C virion component
11124 rbmnc12h04
901bp
unknown/
0bp
UniRef50_O10348 (60%/235)
Cluster: Uncharacterized 44.3 kDa protein; n=14; Nucleopolyhedrovirus|Rep: Uncharacterized 44.3 kDa protein - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
11125 rbmnc12h06
829bp
unknown/
0bp
UniRef50_Q9YMP9 (69%/263)
Cluster: Viral cathepsin; n=30; Nucleopolyhedrovirus|Rep: Viral cathepsin - Lymantria dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
GO:0004197 F cysteine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
11126 rbmnc12h07
716bp
unknown/
0bp
UniRef50_O17445 (69%/204)
Cluster: 60S ribosomal protein L15; n=132; Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0007276 P gamete generation
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040018 P positive regulation of multicellular organism growth
11127 rbmnc12h08
300bp
unknown/
0bp
UniRef50_P61927 (66%/89)
Cluster: 60S ribosomal protein L37; n=40; Euteleostomi|Rep: 60S ribosomal protein L37 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0005737 C cytoplasm
11128 rbmnc12h09
388bp
unknown/
0bp
UniRef50_Q0ZD84 (76%/109)
Cluster: Ribosomal protein S26; n=9; Coelomata|Rep: Ribosomal protein S26 - Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
11129 rbmnc12h10
688bp
unknown/
0bp
UniRef50_Q06669 (82%/133)
Cluster: Uncharacterized 15.5 kDa protein in IAP2-VLF1 intergenic region; n=7; Nucleopolyhedrovirus|Rep: Uncharacterized 15.5 kDa protein in IAP2-VLF1 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11130 rbmnc12h11
831bp
unknown/
0bp
UniRef50_Q06691 (78%/181)
Cluster: Telokin-like protein 20; n=6; Nucleopolyhedrovirus|Rep: Telokin-like protein 20 - Autographa californica nuclear polyhedrosis virus (AcMNPV)
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