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Last updated: 2022/11/18
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No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
11011 rbmnc12c01
246bp
unknown/
0bp
UniRef50_P16709 (100%/76)
Cluster: Ubiquitin-like protein precursor; n=19; root|Rep: Ubiquitin-like protein precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0005634 C nucleus
GO:0006464 P cellular protein modification process
GO:0006512 P obsolete ubiquitin cycle
GO:0019028 C viral capsid
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0016032 P viral process
GO:0019082 P viral protein processing
11012 rbmnc12c02
801bp
unknown/
0bp
UniRef50_P41042 (81%/259)
Cluster: 40S ribosomal protein S4; n=38; Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0000074 P regulation of cell cycle
GO:0005843 C cytosolic small ribosomal subunit
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0005737 C cytoplasm
11013 rbmnc12c03
852bp
unknown/
0bp
UniRef50_P24646 (77%/173)
Cluster: Polyhedrin; n=212; root|Rep: Polyhedrin - Spodoptera littoralis nuclear polyhedrosis virus (SlNPV)
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0007155 P cell adhesion
GO:0015629 C actin cytoskeleton
11014 rbmnc12c04
463bp
unknown/
0bp
UniRef50_P62847 (81%/127)
Cluster: 40S ribosomal protein S24; n=212; Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
11015 rbmnc12c05
863bp
unknown/
0bp
UniRef50_Q197G1 (72%/155)
Cluster: Tail muscle elongation factor 1 gamma; n=1; Procambarus clarkii|Rep: Tail muscle elongation factor 1 gamma - Procambarus clarkii (Red swamp crayfish)
GO:0003746 F translation elongation factor activity
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006414 P translational elongation
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0006412 P translation
11016 rbmnc12c06
838bp
unknown/
0bp
UniRef50_Q5MGK5 (76%/230)
Cluster: Ribosomal protein 23; n=2; Endopterygota|Rep: Ribosomal protein 23 - Lonomia obliqua (Moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0005811 C lipid droplet
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
11017 rbmnc12c07
866bp
unknown/
0bp
UniRef50_P24745 (93%/288)
Cluster: Uncharacterized 38.0 kDa protein in P143-LEF5 intergenic region; n=12; Nucleopolyhedrovirus|Rep: Uncharacterized 38.0 kDa protein in P143-LEF5 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11018 rbmnc12c08
830bp
unknown/
0bp
UniRef50_O10354 (62%/146)
Cluster: Uncharacterized 22.1 kDa protein; n=13; Nucleopolyhedrovirus|Rep: Uncharacterized 22.1 kDa protein - Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
11019 rbmnc12c10
531bp
unknown/
0bp
UniRef50_P62266 (88%/143)
Cluster: 40S ribosomal protein S23; n=141; cellular organisms|Rep: 40S ribosomal protein S23 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006450 P regulation of translational fidelity
GO:0019843 F rRNA binding
11020 rbmnc12c11
654bp
unknown/
0bp
UniRef50_P41432 (85%/173)
Cluster: Uncharacterized 20.4 kDa protein in IAP1-SOD intergenic region; n=4; Nucleopolyhedrovirus|Rep: Uncharacterized 20.4 kDa protein in IAP1-SOD intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11021 rbmnc12c12
704bp
unknown/
0bp
UniRef50_P41679 (82%/233)
Cluster: Uncharacterized 28.5 kDa protein in PK2-LEF7 intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 28.5 kDa protein in PK2-LEF7 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0001584 F obsolete rhodopsin-like receptor activity
GO:0004435 F phosphatidylinositol phospholipase C activity
GO:0004871 F obsolete signal transducer activity
GO:0004872 F signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007596 P blood coagulation
GO:0009611 P response to wounding
GO:0015057 F thrombin-activated receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
11022 rbmnc12c13
842bp
unknown/
0bp
UniRef50_Q6AW70 (96%/131)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
GO:0019012 C virion component
11023 rbmnc12c14
853bp
unknown/
0bp
UniRef50_Q06692 (98%/88)
Cluster: UPF0213 protein in VLF1-GP41 intergenic region; n=12; Nucleopolyhedrovirus|Rep: UPF0213 protein in VLF1-GP41 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0004518 F nuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006281 P DNA repair
GO:0005198 F structural molecule activity
GO:0019012 C virion component
11024 rbmnc12c15
818bp
unknown/
0bp
UniRef50_UPI0000D56F8E (30%/214)
Cluster: PREDICTED: similar to hsp70-interacting protein; n=1; Tribolium castaneum|Rep: PREDICTED: similar to hsp70-interacting protein - Tribolium castaneum
GO:0005488 F binding
11025 rbmnc12c16
842bp
unknown/
0bp
UniRef50_P08865 (68%/222)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
GO:0000028 P ribosomal small subunit assembly
11026 rbmnc12c17
832bp
unknown/
0bp
UniRef50_P17501 (96%/277)
Cluster: Major envelope glycoprotein precursor; n=21; Nucleopolyhedrovirus|Rep: Major envelope glycoprotein precursor - Autographa californica nuclear polyhedrosis virus (AcMNPV)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019031 C viral envelope
GO:0019048 P modulation by virus of host process
GO:0004222 F metalloendopeptidase activity
GO:0006508 P proteolysis
GO:0009405 P obsolete pathogenesis
GO:0046872 F metal ion binding
11027 rbmnc12c18
889bp
unknown/
0bp
UniRef50_Q9VZL1 (53%/63)
Cluster: CG14981-PA, isoform A; n=5; Endopterygota|Rep: CG14981-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005739 C mitochondrion
GO:0002119 P nematode larval development
GO:0005741 C mitochondrial outer membrane
GO:0006886 P intracellular protein transport
GO:0009792 P embryo development ending in birth or egg hatching
GO:0015450 F protein-transporting ATPase activity
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040032 P post-embryonic body morphogenesis
11028 rbmnc12c19
301bp
unknown/
0bp
UniRef50_P41679 (85%/99)
Cluster: Uncharacterized 28.5 kDa protein in PK2-LEF7 intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 28.5 kDa protein in PK2-LEF7 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11029 rbmnc12c20
868bp
unknown/
0bp
UniRef50_Q0N3Z7 (58%/279)
Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: BRO-B - Clanis bilineata nucleopolyhedrosis virus
11030 rbmnc12c21
888bp
unknown/
0bp
UniRef50_P41430 (96%/295)
Cluster: Uncharacterized 36.6 kDa protein in EGT-IAP1 intergenic region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized 36.6 kDa protein in EGT-IAP1 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11031 rbmnc12c22
838bp
unknown/
0bp
UniRef50_P41426 (67%/131)
Cluster: Uncharacterized 36.6 kDa protein in EGT-IAP1 intergenic region; n=6; Nucleopolyhedrovirus|Rep: Uncharacterized 36.6 kDa protein in EGT-IAP1 intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11032 rbmnc12c23
822bp
unknown/
0bp
UniRef50_UPI0000587FDC (68%/54)
Cluster: PREDICTED: hypothetical protein; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: hypothetical protein - Strongylocentrotus purpuratus
GO:0005737 C cytoplasm
GO:0006479 P protein methylation
GO:0008276 F protein methyltransferase activity
11033 rbmnc12c24
457bp
unknown/
0bp
UniRef50_P55828 (86%/112)
Cluster: 40S ribosomal protein S20; n=28; Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0005829 C cytosol
11034 rbmnc12d01
723bp
unknown/
0bp
UniRef50_P33514 (79%/187)
Cluster: 40S ribosomal protein S7; n=94; Eukaryota|Rep: 40S ribosomal protein S7 - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005843 C cytosolic small ribosomal subunit
GO:0005811 C lipid droplet
11035 rbmnc12d02
888bp
unknown/
0bp
UniRef50_UPI00015B6381 (28%/154)
Cluster: PREDICTED: similar to ran gtpase-activating protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ran gtpase-activating protein - Nasonia vitripennis
GO:0005098 F GTPase activator activity
GO:0005515 F protein binding
GO:0007165 P signal transduction
11036 rbmnc12d03
896bp
unknown/
0bp
UniRef50_Q00732 (85%/140)
Cluster: p48 protein; n=16; Nucleopolyhedrovirus|Rep: p48 protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11037 rbmnc12d04
844bp
unknown/
0bp
UniRef50_Q7JVI3 (62%/132)
Cluster: LD23767p; n=8; Endopterygota|Rep: LD23767p - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007030 P Golgi organization
11038 rbmnc12d05
877bp
unknown/
0bp
UniRef50_UPI00015B567B (82%/133)
Cluster: PREDICTED: similar to ribosomal protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ribosomal protein L23Ae - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0000027 P ribosomal large subunit assembly
GO:0005737 C cytoplasm
11039 rbmnc12d06
888bp
unknown/
0bp
UniRef50_P24655 (84%/272)
Cluster: Uncharacterized Bro-N domain-containing protein ORF2; n=12; Nucleopolyhedrovirus|Rep: Uncharacterized Bro-N domain-containing protein ORF2 - Autographa californica nuclear polyhedrosis virus (AcMNPV)
11040 rbmnc12d07
860bp
unknown/
0bp
UniRef50_Q4WCV0 (75%/107)
Cluster: Eukaryotic translation initiation factor eIF-1A subunit, putative; n=10; Fungi/Metazoa group|Rep: Eukaryotic translation initiation factor eIF-1A subunit, putative - Aspergillus fumigatus (Sartorya fumigata)
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0016281 C eukaryotic translation initiation factor 4F complex
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