SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/21180
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
13351 rbmmt17o20
696bp
unknown/
0bp
UniRef50_Q5CEY1 (31%/45)
Cluster: Putative uncharacterized protein; n=3; Cryptosporidium|Rep: Putative uncharacterized protein - Cryptosporidium hominis
13352 rbmmt17o21
632bp
unknown/
0bp
UniRef50_Q9VNE9 (58%/200)
Cluster: 60S ribosomal protein L13A; n=127; Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0007219 P Notch signaling pathway
GO:0008407 P chaeta morphogenesis
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
13353 rbmmt17o22
785bp
unknown/
0bp
UniRef50_Q9MIY8 (61%/209)
Cluster: Cytochrome c oxidase subunit 1; n=861; root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0004129 F cytochrome-c oxidase activity
GO:0005506 F iron ion binding
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0051597 P response to methylmercury
GO:0005515 F protein binding
GO:0006123 P mitochondrial electron transport, cytochrome c to oxygen
13354 rbmmt17o23
625bp
unknown/
0bp
UniRef50_Q9VNE9 (58%/201)
Cluster: 60S ribosomal protein L13A; n=127; Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0007219 P Notch signaling pathway
GO:0008407 P chaeta morphogenesis
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
13355 rbmmt17o24
440bp
unknown/
0bp
UniRef50_Q4KTB1 (43%/116)
Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S30-ubiquitin-like - Suberites domuncula (Sponge)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006464 P cellular protein modification process
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
13356 rbmmt17p01
805bp
unknown/
0bp
UniRef50_A7RGK5 (31%/237)
Cluster: Predicted protein; n=4; Eumetazoa|Rep: Predicted protein - Nematostella vectensis
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0004090 F carbonyl reductase (NADPH) activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0047021 F 15-hydroxyprostaglandin dehydrogenase (NADP+) activity
GO:0050221 F prostaglandin-E2 9-reductase activity
13357 rbmmt17p02
645bp
unknown/
0bp
UniRef50_Q8N0M6 (35%/90)
Cluster: Mucin-like protein 1; n=1; Ctenocephalides felis|Rep: Mucin-like protein 1 - Ctenocephalides felis (Cat flea)
GO:0005576 C extracellular region
GO:0006030 P chitin metabolic process
GO:0008061 F chitin binding
13358 rbmmt17p03
700bp
unknown/
0bp
UniRef50_A5GZD1 (60%/20)
Cluster: AT-hook1 protein; n=1; Capsicum annuum|Rep: AT-hook1 protein - Capsicum annuum (Bell pepper)
GO:0005515 F protein binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008415 F acyltransferase activity
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
13359 rbmmt17p04
803bp
unknown/
0bp
UniRef50_Q86QT5 (74%/35)
Cluster: Putative uncharacterized protein; n=1; Bombyx mori|Rep: Putative uncharacterized protein - Bombyx mori (Silk moth)
GO:0016021 C integral component of membrane
13360 rbmmt17p05
399bp
unknown/
0bp
UniRef50_Q5MGF5 (58%/58)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
GO:0004219 F obsolete pyroglutamyl-peptidase I activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
13361 rbmmt17p08
829bp
unknown/
0bp
UniRef50_Q4H1F9 (96%/96)
Cluster: Glutathione peroxidase; n=5; Eukaryota|Rep: Glutathione peroxidase - Bombyx mori (Silk moth)
GO:0004601 F peroxidase activity
GO:0004602 F glutathione peroxidase activity
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006118 P obsolete electron transport
GO:0006644 P phospholipid metabolic process
GO:0007275 P multicellular organism development
GO:0008430 F selenium binding
GO:0047066 F phospholipid-hydroperoxide glutathione peroxidase activity
13362 rbmmt17p09
324bp
unknown/
0bp
UniRef50_P00408 (41%/105)
Cluster: Cytochrome c oxidase subunit 2; n=4696; Metazoa|Rep: Cytochrome c oxidase subunit 2 - Drosophila melanogaster (Fruit fly)
GO:0004129 F cytochrome-c oxidase activity
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
13363 rbmmt17p10
361bp
unknown/
0bp
UniRef50_P48588 (71%/114)
Cluster: 40S ribosomal protein S25; n=86; Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila melanogaster (Fruit fly)
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
13364 rbmmt17p11
355bp
unknown/
0bp
UniRef50_A2F5P9 (41%/43)
Cluster: Putative uncharacterized protein; n=1; Trichomonas vaginalis G3|Rep: Putative uncharacterized protein - Trichomonas vaginalis G3
GO:0005515 F protein binding
GO:0016021 C integral component of membrane
13365 rbmmt17p12
127bp
unknown/
0bp
(no hit)
13366 rbmmt17p13
640bp
unknown/
0bp
UniRef50_Q1HDZ3 (98%/79)
Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
13367 rbmmt17p14
840bp
unknown/
0bp
UniRef50_Q4RJW3 (63%/226)
Cluster: Chromosome 9 SCAF15033, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 9 SCAF15033, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004819 F glutamine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006424 P glutamyl-tRNA aminoacylation
GO:0006425 P glutaminyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0005515 F protein binding
GO:0005625 C obsolete soluble fraction
13368 rbmmt17p15
685bp
unknown/
0bp
UniRef50_Q9XZH6 (47%/114)
Cluster: Vacuolar ATP synthase subunit G; n=27; Bilateria|Rep: Vacuolar ATP synthase subunit G - Drosophila melanogaster (Fruit fly)
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0005515 F protein binding
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015992 P proton transmembrane transport
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
13369 rbmmt17p16
774bp
unknown/
0bp
UniRef50_UPI00015B62FD (70%/72)
Cluster: PREDICTED: similar to glutamate carboxypeptidase; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to glutamate carboxypeptidase - Nasonia vitripennis
GO:0004180 F carboxypeptidase activity
GO:0005515 F protein binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006751 P glutathione catabolic process
GO:0042802 F identical protein binding
13370 rbmmt17p17
391bp
unknown/
0bp
UniRef50_Q5MGF5 (58%/58)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
GO:0004219 F obsolete pyroglutamyl-peptidase I activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
13371 rbmmt17p18
751bp
unknown/
0bp
UniRef50_P34834 (45%/152)
Cluster: ATP synthase a chain; n=182; Protostomia|Rep: ATP synthase a chain - Anopheles gambiae (African malaria mosquito)
GO:0005739 C mitochondrion
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0008553 F P-type proton-exporting transporter activity
GO:0016787 F hydrolase activity
13372 rbmmt17p19
646bp
unknown/
0bp
UniRef50_Q09F58 (20%/202)
Cluster: Heme maturase; n=4; Alveolata|Rep: Heme maturase - Tetrahymena paravorax
GO:0005739 C mitochondrion
GO:0006461 P protein-containing complex assembly
GO:0008535 P respiratory chain complex IV assembly
GO:0015232 F heme transmembrane transporter activity
GO:0015886 P heme transport
GO:0016020 C membrane
GO:0017004 P cytochrome complex assembly
GO:0000155 F phosphorelay sensor kinase activity
GO:0000160 P phosphorelay signal transduction system
GO:0004673 F protein histidine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0007165 P signal transduction
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0018106 P peptidyl-histidine phosphorylation
13373 rbmmt17p20
789bp
unknown/
0bp
UniRef50_Q4QQ27 (27%/141)
Cluster: IP09353p; n=1; Drosophila melanogaster|Rep: IP09353p - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
13374 rbmmt17p21
795bp
unknown/
0bp
UniRef50_Q9EMQ1 (21%/97)
Cluster: AMV148; n=1; Amsacta moorei entomopoxvirus 'L'|Rep: AMV148 - Amsacta moorei entomopoxvirus (AmEPV)
GO:0005515 F protein binding
GO:0004245 F obsolete neprilysin activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
13375 rbmmt17p22
781bp
unknown/
0bp
UniRef50_UPI00015B56B5 (71%/46)
Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis
13376 rbmmt17p23
696bp
unknown/
0bp
UniRef50_Q23QE5 (38%/34)
Cluster: Immobilization antigen LD, putative; n=1; Tetrahymena thermophila SB210|Rep: Immobilization antigen LD, putative - Tetrahymena thermophila SB210
GO:0005739 C mitochondrion
GO:0006461 P protein-containing complex assembly
GO:0008535 P respiratory chain complex IV assembly
GO:0015232 F heme transmembrane transporter activity
GO:0015886 P heme transport
GO:0016020 C membrane
GO:0016829 F lyase activity
GO:0017004 P cytochrome complex assembly
GO:0009507 C chloroplast
GO:0016021 C integral component of membrane
13377 rbmmt17p24
746bp
unknown/
0bp
UniRef50_Q9VHF2 (58%/211)
Cluster: Phosphotriesterase-related protein; n=5; Endopterygota|Rep: Phosphotriesterase-related protein - Drosophila melanogaster (Fruit fly)
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0009056 P catabolic process
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
13378 rbmmt18a01
776bp
unknown/
0bp
UniRef50_Q13601 (61%/224)
Cluster: KRR1 small subunit processome component homolog; n=44; Eukaryota|Rep: KRR1 small subunit processome component homolog - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0030515 F snoRNA binding
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030529 C ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0005654 C nucleoplasm
13379 rbmmt18a02
379bp
unknown/
0bp
UniRef50_Q6CCA2 (42%/52)
Cluster: Similarity; n=1; Yarrowia lipolytica|Rep: Similarity - Yarrowia lipolytica (Candida lipolytica)
13380 rbmmt18a03
849bp
unknown/
0bp
UniRef50_Q058F0 (29%/81)
Cluster: Putative methyltransferase; n=1; Buchnera aphidicola str. Cc (Cinara cedri)|Rep: Putative methyltransferase - Buchnera aphidicola subsp. Cinara cedri
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
previous next from show/21180

- SilkBase 1999-2023 -