SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/6008
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
691 fprWP03_F_P13
474bp
chromo20/Bm_scaf96
1469819bp
UniRef50_P55828 (84%/115)
Cluster: 40S ribosomal protein S20; n=28; Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0005829 C cytosol
692 fprWP03_F_P17
592bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q9VZL1 (58%/89)
Cluster: CG14981-PA, isoform A; n=5; Endopterygota|Rep: CG14981-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005739 C mitochondrion
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005742 C mitochondrial outer membrane translocase complex
GO:0006626 P protein targeting to mitochondrion
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019867 C outer membrane
GO:0043681 P protein targeting to mitochondrion
GO:0065002 P intracellular protein transmembrane transport
GO:0002119 P nematode larval development
GO:0005741 C mitochondrial outer membrane
GO:0006886 P intracellular protein transport
GO:0009792 P embryo development ending in birth or egg hatching
GO:0015450 F protein-transporting ATPase activity
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040032 P post-embryonic body morphogenesis
693 fprWP03_F_P19
565bp
chromo20/Bm_scaf37
4206046bp
UniRef50_P33514 (77%/163)
Cluster: 40S ribosomal protein S7; n=94; Eukaryota|Rep: 40S ribosomal protein S7 - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005811 C lipid droplet
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005843 C cytosolic small ribosomal subunit
694 fprWP03_F_P20
482bp
chromo10/Bm_scaf70
1945803bp
UniRef50_P62244 (95%/47)
Cluster: 40S ribosomal protein S15a; n=205; Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
695 fprWP03_F_P21
654bp
chromo18/Bm_scaf2
11281751bp
UniRef50_Q9NSK0 (58%/129)
Cluster: Kinesin light chain 4; n=200; Eumetazoa|Rep: Kinesin light chain 4 - Homo sapiens (Human)
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005737 C cytoplasm
GO:0008017 F microtubule binding
GO:0008808 F cardiolipin synthase activity
GO:0009434 C motile cilium
GO:0019894 F kinesin binding
GO:0035253 C ciliary rootlet
GO:0043005 C neuron projection
696 fprWP03_F_P22
631bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q9V3F2 (62%/111)
Cluster: CG4162-PA; n=6; Endopterygota|Rep: CG4162-PA - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016769 F transferase activity, transferring nitrogenous groups
GO:0030170 F pyridoxal phosphate binding
GO:0004758 F serine C-palmitoyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0008152 P metabolic process
GO:0008415 F acyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0008483 F transaminase activity
697 fprWP03_F_P24
654bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q1HQN9 (48%/153)
Cluster: Olygosaccharyltransferase alpha subunit; n=3; Endopterygota|Rep: Olygosaccharyltransferase alpha subunit - Aedes aegypti (Yellowfever mosquito)
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0006486 P protein glycosylation
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0003723 F RNA binding
GO:0005789 C endoplasmic reticulum membrane
GO:0006464 P cellular protein modification process
GO:0008250 C oligosaccharyltransferase complex
GO:0016020 C membrane
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030867 C rough endoplasmic reticulum membrane
698 fprWP04_F_A01
373bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q962S5 (90%/20)
Cluster: Ribosomal protein L38; n=14; Eukaryota|Rep: Ribosomal protein L38 - Spodoptera frugiperda (Fall armyworm)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0007276 P gamete generation
GO:0040010 P positive regulation of growth rate
699 fprWP04_F_A02
645bp
chromo1/Bm_scaf8
8002931bp
UniRef50_A2A246 (96%/26)
Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-box protein - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0006355 P regulation of transcription, DNA-templated
700 fprWP04_F_A08
552bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q4GXT1 (74%/159)
Cluster: Ribosomal protein S10e; n=3; Fungi/Metazoa group|Rep: Ribosomal protein S10e - Agriotes lineatus (Lined click beetle)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
701 fprWP04_F_A09
631bp
unknown/Bm_scaf1095
11702bp
UniRef50_Q4TA39 (36%/213)
Cluster: Chromosome undetermined SCAF7452, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF7452, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
702 fprWP04_F_A10
653bp
chromo2/Bm_scaf27
4962828bp
UniRef50_P48643 (73%/104)
Cluster: T-complex protein 1 subunit epsilon; n=123; Eukaryota|Rep: T-complex protein 1 subunit epsilon - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005832 C chaperonin-containing T-complex
GO:0006457 P protein folding
GO:0044267 P cellular protein metabolic process
GO:0051082 F unfolded protein binding
703 fprWP04_F_A12
515bp
chromo20/Bm_scaf96
1469819bp
UniRef50_P55828 (85%/115)
Cluster: 40S ribosomal protein S20; n=28; Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0005829 C cytosol
704 fprWP04_F_A14
340bp
chromo25/Bm_scaf65
2150616bp
UniRef50_Q9VH69 (85%/56)
Cluster: 40S ribosomal protein S29; n=31; Eukaryota|Rep: 40S ribosomal protein S29 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0048666 P neuron development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0015935 C small ribosomal subunit
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040018 P positive regulation of multicellular organism growth
705 fprWP04_F_A15
652bp
chromo11/Bm_scaf24
5118123bp
UniRef50_Q60TV3 (27%/103)
Cluster: Putative uncharacterized protein CBG20299; n=1; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG20299 - Caenorhabditis briggsae
GO:0008565 F obsolete protein transporter activity
GO:0016485 P protein processing
GO:0019069 P viral capsid assembly
706 fprWP04_F_A17
356bp
unknown/Bm_scaf199
122278bp
UniRef50_Q9GSV9 (97%/75)
Cluster: Ornithine decarboxylase antizyme; n=1; Bombyx mori|Rep: Ornithine decarboxylase antizyme - Bombyx mori (Silk moth)
GO:0004857 F enzyme inhibitor activity
GO:0008073 F ornithine decarboxylase inhibitor activity
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
707 fprWP04_F_A18
651bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P62424 (63%/155)
Cluster: 60S ribosomal protein L7a; n=226; Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005624 C obsolete membrane fraction
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0042788 C polysomal ribosome
708 fprWP04_F_A19
438bp
chromo7/Bm_scaf15
6423983bp
UniRef50_Q71UM5 (80%/73)
Cluster: 40S ribosomal protein S27-like protein; n=100; Eukaryota|Rep: 40S ribosomal protein S27-like protein - Homo sapiens (Human)
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0007165 P signal transduction
GO:0008283 P cell population proliferation
709 fprWP04_F_A20
655bp
chromo11/Bm_scaf35
4373199bp
UniRef50_Q9VG04 (67%/184)
Cluster: CG8031-PA; n=9; Eukaryota|Rep: CG8031-PA - Drosophila melanogaster (Fruit fly)
GO:0005634 C nucleus
GO:0005737 C cytoplasm
710 fprWP04_F_A22
655bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P11142 (85%/145)
Cluster: Heat shock cognate 71 kDa protein; n=239; Eukaryota|Rep: Heat shock cognate 71 kDa protein - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0006950 P response to stress
GO:0006986 P response to unfolded protein
GO:0009986 C cell surface
GO:0042623 F ATP hydrolysis activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006402 P mRNA catabolic process
GO:0006916 P negative regulation of apoptotic process
GO:0051082 F unfolded protein binding
711 fprWP04_F_A23
645bp
chromo22/Bm_scaf18
5904300bp
UniRef50_P27797 (67%/181)
Cluster: Calreticulin precursor; n=144; Eukaryota|Rep: Calreticulin precursor - Homo sapiens (Human)
GO:0003677 F DNA binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005529 F carbohydrate binding
GO:0005578 C extracellular matrix
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006457 P protein folding
GO:0006611 P protein export from nucleus
GO:0006874 P cellular calcium ion homeostasis
GO:0008270 F zinc ion binding
GO:0042981 P regulation of apoptotic process
GO:0046872 F metal ion binding
GO:0051082 F unfolded protein binding
712 fprWP04_F_A24
650bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q9V427 (83%/191)
Cluster: Innexin inx2; n=16; Pancrustacea|Rep: Innexin inx2 - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005921 C gap junction
GO:0007440 P foregut morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0042048 P olfactory behavior
GO:0005243 F gap junction channel activity
GO:0007602 P phototransduction
GO:0007610 P behavior
GO:0007630 P jump response
GO:0009416 P response to light stimulus
GO:0009881 F photoreceptor activity
GO:0016264 P gap junction assembly
713 fprWP04_F_B02
352bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q24154 (61%/49)
Cluster: 60S ribosomal protein L29; n=12; Endopterygota|Rep: 60S ribosomal protein L29 - Drosophila melanogaster (Fruit fly)
GO:0003682 F chromatin binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005730 C nucleolus
GO:0005829 C cytosol
714 fprWP04_F_B03
506bp
chromo23/Bm_scaf12
6701349bp
UniRef50_O95478 (59%/151)
Cluster: TGF-beta-inducible nuclear protein 1; n=61; Eukaryota|Rep: TGF-beta-inducible nuclear protein 1 - Homo sapiens (Human)
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
715 fprWP04_F_B05
649bp
chromo6/Bm_scaf11
6993210bp
UniRef50_UPI00015B5BD1 (67%/90)
Cluster: PREDICTED: similar to RE48840p; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to RE48840p - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008186 F ATP-dependent activity, acting on RNA
GO:0042254 P ribosome biogenesis
716 fprWP04_F_B06
572bp
chromo26/Bm_scaf25
4930657bp
UniRef50_Q8WR50 (98%/131)
Cluster: Star; n=1; Bombyx mori|Rep: Star - Bombyx mori (Silk moth)
GO:0000042 P protein localization to Golgi apparatus
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007174 P epidermal growth factor catabolic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035225 P determination of genital disc primordium
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0042461 P photoreceptor cell development
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0050896 P response to stimulus
GO:0003677 F DNA binding
GO:0008270 F zinc ion binding
717 fprWP04_F_B07
362bp
chromo25/Bm_scaf65
2150616bp
UniRef50_Q9VH69 (78%/56)
Cluster: 40S ribosomal protein S29; n=31; Eukaryota|Rep: 40S ribosomal protein S29 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0048666 P neuron development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0015935 C small ribosomal subunit
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040018 P positive regulation of multicellular organism growth
718 fprWP04_F_B08
517bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P46776 (47%/148)
Cluster: 60S ribosomal protein L27a; n=204; Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
719 fprWP04_F_B10
634bp
chromo24/Bm_scaf115
864725bp
UniRef50_A3FMR3 (38%/76)
Cluster: Pol-like protein; n=2; Biomphalaria glabrata|Rep: Pol-like protein - Biomphalaria glabrata (Bloodfluke planorb)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0003677 F DNA binding
GO:0004519 F endonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006281 P DNA repair
720 fprWP04_F_B11
637bp
chromo14/Bm_scaf53
2821953bp
UniRef50_Q6I9T5 (62%/149)
Cluster: MAB21L1 protein; n=47; Eumetazoa|Rep: MAB21L1 protein - Homo sapiens (Human)
previous next from show/6008

- SilkBase 1999-2023 -