SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/6008
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
2611 fprWP12_F_M14
378bp
chromo15/Bm_scaf42
3822572bp
UniRef50_Q3UA25 (50%/127)
Cluster: Bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031J02 product:ribosomal protein S8, full insert sequence; n=9; Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031J02 product:ribosomal protein S8, full insert sequence - Mus musculus (Mouse)
GO:0005622 C intracellular anatomical structure
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
2612 fprWP12_F_M15
648bp
chromo11/Bm_scaf24
5118123bp
UniRef50_Q9U8L9 (99%/106)
Cluster: Mitochondrial carrier homolog; n=1; Bombyx mori|Rep: Mitochondrial carrier homolog - Bombyx mori (Silk moth)
GO:0005488 F binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2613 fprWP12_F_M17
490bp
chromo20/Bm_scaf96
1469819bp
UniRef50_P04350 (93%/122)
Cluster: Tubulin beta-4 chain; n=4602; root|Rep: Tubulin beta-4 chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0000212 P meiotic spindle organization
GO:0002119 P nematode larval development
GO:0005737 C cytoplasm
GO:0007051 P spindle organization
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
2614 fprWP12_F_M18
650bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q9VMW8 (45%/173)
Cluster: Mannose-P-dolichol utilization defect 1 protein homolog; n=6; Endopterygota|Rep: Mannose-P-dolichol utilization defect 1 protein homolog - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2615 fprWP12_F_M22
456bp
chromo23/Bm_scaf12
6701349bp
UniRef50_O95478 (57%/139)
Cluster: TGF-beta-inducible nuclear protein 1; n=61; Eukaryota|Rep: TGF-beta-inducible nuclear protein 1 - Homo sapiens (Human)
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
2616 fprWP12_F_N01
637bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P46782 (88%/166)
Cluster: 40S ribosomal protein S5; n=150; Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005829 C cytosol
GO:0019843 F rRNA binding
2617 fprWP12_F_N02
651bp
chromo25/Bm_scaf32
4385969bp
UniRef50_UPI0000D558C5 (49%/158)
Cluster: PREDICTED: similar to CG12909-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG12909-PA - Tribolium castaneum
2618 fprWP12_F_N03
650bp
chromo6/Bm_scaf111
965032bp
UniRef50_Q9VES8 (45%/150)
Cluster: CG10340-PA; n=4; melanogaster subgroup|Rep: CG10340-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006461 P protein-containing complex assembly
2619 fprWP12_F_N04
550bp
chromo23/Bm_scaf22
5301712bp
UniRef50_Q02543 (60%/166)
Cluster: 60S ribosomal protein L18a; n=120; Fungi/Metazoa group|Rep: 60S ribosomal protein L18a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005730 C nucleolus
GO:0005829 C cytosol
2620 fprWP12_F_N07
584bp
chromo19/Bm_scaf36
4352778bp
UniRef50_Q4V5X9 (71%/156)
Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
2621 fprWP12_F_N08
652bp
unknown/Bm_scaf1453
4011bp
UniRef50_Q4FH11 (56%/217)
Cluster: Cytochrome c oxidase subunit I; n=26; Bilateria|Rep: Cytochrome c oxidase subunit I - Samia cynthia ricini (Indian eri silkmoth)
GO:0004129 F cytochrome-c oxidase activity
GO:0005506 F iron ion binding
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0051597 P response to methylmercury
2622 fprWP12_F_N11
647bp
chromo16/Bm_scaf39
3876397bp
UniRef50_Q16QJ9 (54%/116)
Cluster: Phosphatidylethanolamine-binding protein; n=6; Culicidae|Rep: Phosphatidylethanolamine-binding protein - Aedes aegypti (Yellowfever mosquito)
GO:0008289 F lipid binding
2623 fprWP12_F_N13
606bp
chromo11/Bm_scaf35
4373199bp
UniRef50_Q3C2E4 (88%/162)
Cluster: Cytochrome P450; n=2; Obtectomera|Rep: Cytochrome P450 - Bombyx mori (Silk moth)
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0006118 P obsolete electron transport
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005792 C obsolete microsome
GO:0007275 P multicellular organism development
GO:0016020 C membrane
2624 fprWP12_F_N14
514bp
chromo23/Bm_scaf12
6701349bp
UniRef50_P62979 (65%/52)
Cluster: 40S ribosomal protein S27a; n=188; root|Rep: 40S ribosomal protein S27a - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
2625 fprWP12_F_N15
653bp
chromo20/Bm_scaf37
4206046bp
UniRef50_P33514 (79%/188)
Cluster: 40S ribosomal protein S7; n=94; Eukaryota|Rep: 40S ribosomal protein S7 - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005843 C cytosolic small ribosomal subunit
GO:0005811 C lipid droplet
2626 fprWP12_F_N17
624bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q6LEH5 (83%/117)
Cluster: Epidermal growth factor receptor type III; n=1; Drosophila melanogaster|Rep: Epidermal growth factor receptor type III - Drosophila melanogaster (Fruit fly)
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0001654 P eye development
GO:0001709 P cell fate determination
GO:0001742 P oenocyte differentiation
GO:0001745 P compound eye morphogenesis
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001752 P compound eye photoreceptor fate commitment
GO:0002009 P morphogenesis of an epithelium
GO:0004713 F protein tyrosine kinase activity
GO:0004872 F signaling receptor activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005006 F epidermal growth factor-activated receptor activity
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006916 P negative regulation of apoptotic process
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007298 P border follicle cell migration
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007314 P oocyte anterior/posterior axis specification
GO:0007346 P regulation of mitotic cell cycle
GO:0007350 P blastoderm segmentation
GO:0007367 P segment polarity determination
GO:0007369 P gastrulation
GO:0007390 P germ-band shortening
GO:0007391 P dorsal closure
GO:0007420 P brain development
GO:0007421 P stomatogastric nervous system development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007443 P Malpighian tubule morphogenesis
GO:0007444 P imaginal disc development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007469 P antennal development
GO:0007472 P wing disc morphogenesis
GO:0007473 P wing disc proximal/distal pattern formation
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007477 P notum development
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007482 P haltere development
GO:0008071 P maternal determination of dorsal/ventral axis, ovarian follicular epithelium, soma encoded
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0009880 P embryonic pattern specification
GO:0009952 P anterior/posterior pattern specification
GO:0009953 P dorsal/ventral pattern formation
GO:0016020 C membrane
GO:0016203 P muscle attachment
GO:0016301 F kinase activity
GO:0016318 P ommatidial rotation
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0016333 P morphogenesis of follicular epithelium
GO:0016337 P cell-cell adhesion
GO:0019904 F protein domain specific binding
GO:0030031 P cell projection assembly
GO:0030381 P chorion-containing eggshell pattern formation
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0035202 P tracheal pit formation in open tracheal system
GO:0035225 P determination of genital disc primordium
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035309 P wing and notum subfield formation
GO:0035310 P notum cell fate specification
GO:0042676 P compound eye cone cell fate commitment
GO:0042694 P muscle cell fate specification
GO:0043066 P negative regulation of apoptotic process
GO:0045466 P R7 cell differentiation
GO:0045468 P regulation of R8 cell spacing in compound eye
GO:0045610 P regulation of hemocyte differentiation
GO:0046673 P negative regulation of compound eye retinal cell programmed cell death
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0048139 P female germ-line cyst encapsulation
GO:0048140 P male germ-line cyst encapsulation
GO:0048749 P compound eye development
GO:0005080 F protein kinase C binding
GO:0005159 F insulin-like growth factor receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0006605 P protein targeting
GO:0008426 F protein kinase C inhibitor activity
GO:0009966 P regulation of signal transduction
GO:0045664 P regulation of neuron differentiation
GO:0048167 P regulation of synaptic plasticity
GO:0007242 P intracellular signal transduction
GO:0019899 F enzyme binding
2627 fprWP12_F_N19
650bp
chromo20/Bm_scaf96
1469819bp
UniRef50_P04350 (83%/185)
Cluster: Tubulin beta-4 chain; n=4602; root|Rep: Tubulin beta-4 chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0000212 P meiotic spindle organization
GO:0002119 P nematode larval development
GO:0005737 C cytoplasm
GO:0007051 P spindle organization
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
2628 fprWP12_F_N20
425bp
chromo7/Bm_scaf15
6423983bp
UniRef50_P42677 (87%/70)
Cluster: 40S ribosomal protein S27; n=74; Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2629 fprWP12_F_N22
639bp
chromo12/Bm_scaf119
726203bp
UniRef50_Q1HDZ3 (97%/77)
Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
2630 fprWP12_F_O06
630bp
chromo11/Bm_scaf352
30459bp
UniRef50_A7KCW5 (83%/137)
Cluster: Ribosomal protein L14; n=1; Heliconius melpomene|Rep: Ribosomal protein L14 - Heliconius melpomene
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0043524 P negative regulation of neuron apoptotic process
2631 fprWP12_F_O10
505bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P46776 (48%/147)
Cluster: 60S ribosomal protein L27a; n=204; Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2632 fprWP12_F_O12
534bp
chromo16/Bm_scaf39
3876397bp
UniRef50_P42037 (44%/113)
Cluster: 60S acidic ribosomal protein P2; n=13; Eukaryota|Rep: 60S acidic ribosomal protein P2 - Alternaria alternata (Alternaria rot fungus)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
2633 fprWP12_F_O14
361bp
chromo24/Bm_scaf107
1152854bp
UniRef50_Q16RN6 (82%/69)
Cluster: Adp,atp carrier protein; n=1; Aedes aegypti|Rep: Adp,atp carrier protein - Aedes aegypti (Yellowfever mosquito)
GO:0005215 F transporter activity
GO:0005488 F binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005471 F ATP:ADP antiporter activity
GO:0005515 F protein binding
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006839 P mitochondrial transport
GO:0006915 P apoptotic process
GO:0005887 C integral component of plasma membrane
GO:0015207 F adenine transmembrane transporter activity
GO:0000002 P mitochondrial genome maintenance
GO:0006091 P generation of precursor metabolites and energy
GO:0019861 C obsolete flagellum
2634 fprWP12_F_O16
493bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q9W5R8 (61%/100)
Cluster: 60S ribosomal protein L5; n=67; Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008097 F 5S rRNA binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
2635 fprWP12_F_O17
652bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P15880 (85%/104)
Cluster: 40S ribosomal protein S2; n=284; Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005829 C cytosol
2636 fprWP12_F_O18
510bp
chromo10/Bm_scaf70
1945803bp
UniRef50_UPI0000D571EF (43%/114)
Cluster: PREDICTED: similar to C6.1A protein; n=1; Tribolium castaneum|Rep: PREDICTED: similar to C6.1A protein - Tribolium castaneum
GO:0006512 P obsolete ubiquitin cycle
GO:0006974 P cellular response to DNA damage stimulus
2637 fprWP12_F_O23
652bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P46782 (80%/100)
Cluster: 40S ribosomal protein S5; n=150; Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
2638 fprWP12_F_O24
620bp
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI00005A4635 (92%/192)
Cluster: PREDICTED: similar to statin-like; n=2; Canis lupus familiaris|Rep: PREDICTED: similar to statin-like - Canis familiaris
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
2639 fprWP12_F_P01
650bp
chromo5/Bm_scaf9
8107424bp
UniRef50_P24666 (56%/144)
Cluster: Low molecular weight phosphotyrosine protein phosphatase; n=30; Tetrapoda|Rep: Low molecular weight phosphotyrosine protein phosphatase - Homo sapiens (Human)
GO:0003993 F acid phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005625 C obsolete soluble fraction
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0016791 F phosphatase activity
2640 fprWP12_F_P03
409bp
chromo22/Bm_scaf18
5904300bp
UniRef50_P61927 (64%/94)
Cluster: 60S ribosomal protein L37; n=40; Euteleostomi|Rep: 60S ribosomal protein L37 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0005737 C cytoplasm
previous next from show/6008

- SilkBase 1999-2023 -