SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/6008
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
2461 fprWP12_F_B05
650bp
chromo23/Bm_scaf83
1589841bp
UniRef50_UPI0000E489B6 (48%/27)
Cluster: PREDICTED: hypothetical protein; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: hypothetical protein - Strongylocentrotus purpuratus
GO:0007049 P cell cycle
GO:0016021 C integral component of membrane
GO:0051301 P cell division
2462 fprWP12_F_B06
466bp
chromo1/Bm_scaf23
5097954bp
UniRef50_P49630 (72%/106)
Cluster: 60S ribosomal protein L36 (Protein minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein L36 (Protein minute(1)1B) - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005730 C nucleolus
GO:0005842 C cytosolic large ribosomal subunit
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0005515 F protein binding
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
2463 fprWP12_F_B07
349bp
chromo16/Bm_scaf4
9119588bp
UniRef50_A7QRK5 (39%/33)
Cluster: Chromosome undetermined scaffold_151, whole genome shotgun sequence; n=14; Eukaryota|Rep: Chromosome undetermined scaffold_151, whole genome shotgun sequence - Vitis vinifera (Grape)
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016491 F oxidoreductase activity
GO:0042773 P ATP synthesis coupled electron transport
2464 fprWP12_F_B08
622bp
chromo4/Bm_scaf130
668521bp
UniRef50_P39023 (68%/192)
Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2465 fprWP12_F_B09
649bp
chromo25/Bm_scaf144
402969bp
UniRef50_Q7PGG1 (43%/146)
Cluster: ENSANGP00000024531; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000024531 - Anopheles gambiae str. PEST
2466 fprWP12_F_B11
628bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q2HZZ4 (71%/154)
Cluster: Cytochrome P450 CYP315A1; n=2; Obtectomera|Rep: Cytochrome P450 CYP315A1 - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0006118 P obsolete electron transport
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0005739 C mitochondrion
GO:0006697 P ecdysone biosynthetic process
GO:0016020 C membrane
GO:0042768 F ecdysteroid 2-hydroxylase activity
2467 fprWP12_F_B12
637bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P62906 (60%/125)
Cluster: 60S ribosomal protein L10a; n=212; Eukaryota|Rep: 60S ribosomal protein L10a - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0009653 P anatomical structure morphogenesis
GO:0030529 C ribonucleoprotein complex
2468 fprWP12_F_B13
415bp
chromo3/Bm_scaf55
2715649bp
UniRef50_Q0ZD84 (76%/109)
Cluster: Ribosomal protein S26; n=9; Coelomata|Rep: Ribosomal protein S26 - Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
2469 fprWP12_F_B14
510bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P62241 (64%/148)
Cluster: 40S ribosomal protein S8; n=93; Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2470 fprWP12_F_B15
498bp
unknown/Bm_scaf1114_contig45323
5376bp
UniRef50_P62910 (81%/133)
Cluster: 60S ribosomal protein L32; n=83; Eukaryota|Rep: 60S ribosomal protein L32 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0005842 C cytosolic large ribosomal subunit
2471 fprWP12_F_B16
634bp
chromo14/Bm_scaf81
1583493bp
UniRef50_Q16134 (62%/51)
Cluster: Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial precursor; n=147; cellular organisms|Rep: Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial precursor - Homo sapiens (Human)
GO:0004174 F electron-transferring-flavoprotein dehydrogenase activity
GO:0005506 F iron ion binding
GO:0005624 C obsolete membrane fraction
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0009054 F electron transfer activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0002119 P nematode larval development
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040010 P positive regulation of growth rate
GO:0040032 P post-embryonic body morphogenesis
GO:0004368 F glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0009331 C glycerol-3-phosphate dehydrogenase complex
2472 fprWP12_F_B18
651bp
chromo10/Bm_scaf30
4522305bp
UniRef50_Q2F5V7 (87%/166)
Cluster: Tetraspanin D107; n=5; Endopterygota|Rep: Tetraspanin D107 - Bombyx mori (Silk moth)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2473 fprWP12_F_B20
645bp
chromo12/Bm_scaf6
8265254bp
UniRef50_Q4H4G7 (100%/72)
Cluster: BmRelA; n=2; Bombyx mori|Rep: BmRelA - Bombyx mori (Silk moth)
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0045449 P regulation of transcription, DNA-templated
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001715 P ectodermal cell fate specification
GO:0003677 F DNA binding
GO:0003702 F obsolete RNA polymerase II transcription factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006350 P transcription, DNA-templated
GO:0006952 P defense response
GO:0006955 P immune response
GO:0007275 P multicellular organism development
GO:0007369 P gastrulation
GO:0007398 P ectoderm development
GO:0007419 P ventral cord development
GO:0007498 P mesoderm development
GO:0007501 P mesodermal cell fate specification
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0008354 P germ cell migration
GO:0009950 P dorsal/ventral axis specification
GO:0009952 P anterior/posterior pattern specification
GO:0009953 P dorsal/ventral pattern formation
GO:0010004 P gastrulation involving germ band extension
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016563 F obsolete transcription activator activity
GO:0016564 F obsolete transcription repressor activity
GO:0042387 P plasmatocyte differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
2474 fprWP12_F_B21
606bp
chromo23/Bm_scaf12
6701349bp
UniRef50_Q9WR81 (96%/56)
Cluster: Polyprotein; n=31; root|Rep: Polyprotein - Bovine viral diarrhea virus 2 (BVDV-2)
GO:0004252 F serine-type endopeptidase activity
GO:0006464 P cellular protein modification process
GO:0006508 P proteolysis
GO:0016032 P viral process
GO:0019082 P viral protein processing
GO:0003735 F structural constituent of ribosome
GO:0003824 F catalytic activity
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
2475 fprWP12_F_B22
581bp
chromo11/Bm_scaf352
30459bp
UniRef50_A7KCW5 (86%/136)
Cluster: Ribosomal protein L14; n=1; Heliconius melpomene|Rep: Ribosomal protein L14 - Heliconius melpomene
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0043524 P negative regulation of neuron apoptotic process
2476 fprWP12_F_B24
549bp
chromo15/Bm_scaf3
9954263bp
UniRef50_UPI00015B4992 (66%/100)
Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006979 P response to oxidative stress
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0016667 F oxidoreductase activity, acting on a sulfur group of donors
GO:0032542 F sulfiredoxin activity
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
2477 fprWP12_F_C01
401bp
chromo11/Bm_scaf35
4373199bp
UniRef50_P36578 (72%/99)
Cluster: 60S ribosomal protein L4; n=70; Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005811 C lipid droplet
2478 fprWP12_F_C05
647bp
chromo18/Bm_scaf2
11281751bp
(no hit)
2479 fprWP12_F_C06
630bp
unknown/Bm_scaf157
326066bp
UniRef50_Q12905 (61%/102)
Cluster: Interleukin enhancer-binding factor 2; n=54; Eumetazoa|Rep: Interleukin enhancer-binding factor 2 - Homo sapiens (Human)
GO:0003677 F DNA binding
GO:0003702 F obsolete RNA polymerase II transcription factor activity
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0003723 F RNA binding
GO:0005524 F ATP binding
GO:0006955 P immune response
GO:0016740 F transferase activity
2480 fprWP12_F_C13
614bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q17L04 (35%/51)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0005578 C extracellular matrix
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0016301 F kinase activity
GO:0016740 F transferase activity
2481 fprWP12_F_C15
468bp
chromo5/Bm_scaf101
1310704bp
UniRef50_Q7QG44 (62%/95)
Cluster: ENSANGP00000011079; n=4; Neoptera|Rep: ENSANGP00000011079 - Anopheles gambiae str. PEST
GO:0015986 P ATP synthesis coupled proton transport
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015992 P proton transmembrane transport
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046872 F metal ion binding
2482 fprWP12_F_C17
553bp
chromo17/Bm_scaf92
1585222bp
UniRef50_O00232 (55%/63)
Cluster: 26S proteasome non-ATPase regulatory subunit 12; n=47; Eumetazoa|Rep: 26S proteasome non-ATPase regulatory subunit 12 - Homo sapiens (Human)
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005838 C proteasome regulatory particle
GO:0043234 C protein-containing complex
GO:0004175 F endopeptidase activity
GO:0006508 P proteolysis
2483 fprWP12_F_C18
441bp
chromo17/Bm_scaf114
978332bp
UniRef50_P62847 (80%/105)
Cluster: 40S ribosomal protein S24; n=212; Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
2484 fprWP12_F_C21
635bp
chromo10/Bm_scaf30
4522305bp
UniRef50_UPI00015B5D89 (84%/152)
Cluster: PREDICTED: similar to jun activation domain binding protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to jun activation domain binding protein - Nasonia vitripennis
GO:0000074 P regulation of cell cycle
GO:0003713 F transcription coactivator activity
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006366 P transcription by RNA polymerase II
GO:0006412 P translation
GO:0008180 C COP9 signalosome
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0000003 P reproduction
GO:0000132 P establishment of mitotic spindle orientation
GO:0000910 P cytokinesis
GO:0007275 P multicellular organism development
GO:0008022 F protein C-terminus binding
GO:0008406 P gonad development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0017151 F DEAD/H-box RNA helicase binding
GO:0030154 P cell differentiation
GO:0040016 P embryonic cleavage
GO:0048477 P oogenesis
2485 fprWP12_F_C23
648bp
chromo5/Bm_scaf9
8107424bp
UniRef50_P19784 (66%/128)
Cluster: Casein kinase II subunit alpha'; n=5; Euarchontoglires|Rep: Casein kinase II subunit alpha' - Homo sapiens (Human)
GO:0000074 P regulation of cell cycle
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004682 F obsolete protein kinase CK2 activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007286 P spermatid development
GO:0016055 P Wnt signaling pathway
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0047485 F protein N-terminus binding
2486 fprWP12_F_C24
606bp
chromo25/Bm_scaf89
1495961bp
UniRef50_A4KWG0 (57%/33)
Cluster: Reverse transcriptase; n=3; Ostrinia nubilalis|Rep: Reverse transcriptase - Ostrinia nubilalis (European corn borer)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0004519 F endonuclease activity
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
2487 fprWP12_F_D02
337bp
chromo4/Bm_scaf5
8683647bp
(no hit)
2488 fprWP12_F_D03
590bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q16XX4 (67%/167)
Cluster: DEAD box ATP-dependent RNA helicase; n=5; Neoptera|Rep: DEAD box ATP-dependent RNA helicase - Aedes aegypti (Yellowfever mosquito)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0016246 P RNA interference
GO:0019730 P antimicrobial humoral response
GO:0031047 P gene silencing by RNA
2489 fprWP12_F_D05
650bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55F1F (46%/154)
Cluster: PREDICTED: similar to CG33113-PF, isoform F; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG33113-PF, isoform F - Tribolium castaneum
GO:0005783 C endoplasmic reticulum
GO:0005515 F protein binding
GO:0042048 P olfactory behavior
2490 fprWP12_F_D06
461bp
chromo12/Bm_scaf125
698686bp
UniRef50_O61661 (76%/25)
Cluster: Serine/threonine-protein kinase grp; n=7; Diptera|Rep: Serine/threonine-protein kinase grp - Drosophila melanogaster (Fruit fly)
GO:0000075 P cell cycle checkpoint signaling
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007275 P multicellular organism development
GO:0007348 P regulation of syncytial blastoderm mitotic cell cycle
GO:0007349 P cellularization
GO:0007444 P imaginal disc development
GO:0009314 P response to radiation
GO:0016301 F kinase activity
GO:0016321 P female meiosis chromosome segregation
GO:0016740 F transferase activity
GO:0030162 P regulation of proteolysis
GO:0051299 P centrosome separation
previous next from show/6008

- SilkBase 1999-2023 -