SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/5024
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
361 fe100P02_F_L08
651bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q9W5R8 (74%/191)
Cluster: 60S ribosomal protein L5; n=67; Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008097 F 5S rRNA binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040018 P positive regulation of multicellular organism growth
GO:0040035 P hermaphrodite genitalia development
362 fe100P02_F_L11
469bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5MGF5 (56%/58)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
363 fe100P02_F_L17
651bp
chromo11/Bm_scaf135
559623bp
UniRef50_P60900 (68%/144)
Cluster: Proteasome subunit alpha type-6; n=69; Eukaryota|Rep: Proteasome subunit alpha type-6 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005839 C proteasome core complex
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0043234 C protein-containing complex
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0007626 P locomotory behavior
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040015 P negative regulation of multicellular organism growth
364 fe100P02_F_L18
651bp
chromo26/Bm_scaf98
1322498bp
UniRef50_P30048 (68%/160)
Cluster: Thioredoxin-dependent peroxide reductase, mitochondrial precursor; n=45; cellular organisms|Rep: Thioredoxin-dependent peroxide reductase, mitochondrial precursor - Homo sapiens (Human)
GO:0004601 F peroxidase activity
GO:0005739 C mitochondrion
GO:0008385 C IkappaB kinase complex
GO:0008785 F alkyl hydroperoxide reductase activity
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0019901 F protein kinase binding
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051920 F peroxiredoxin activity
GO:0005737 C cytoplasm
GO:0006916 P negative regulation of apoptotic process
GO:0006979 P response to oxidative stress
GO:0008379 F thioredoxin peroxidase activity
GO:0042981 P regulation of apoptotic process
GO:0001501 P skeletal system development
GO:0008283 P cell population proliferation
GO:0007252 P I-kappaB phosphorylation
365 fe100P02_F_M03
600bp
chromo4/Bm_scaf13
6731059bp
UniRef50_Q9VGS2 (67%/131)
Cluster: Translationally-controlled tumor protein homolog; n=28; Fungi/Metazoa group|Rep: Translationally-controlled tumor protein homolog - Drosophila melanogaster (Fruit fly)
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0045298 C tubulin complex
366 fe100P02_F_M05
649bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9UIV1 (75%/73)
Cluster: CCR4-NOT transcription complex subunit 7; n=27; Eukaryota|Rep: CCR4-NOT transcription complex subunit 7 - Homo sapiens (Human)
GO:0003676 F nucleic acid binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005975 P carbohydrate metabolic process
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0030014 C CCR4-NOT complex
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0008285 P negative regulation of cell population proliferation
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0005829 C cytosol
GO:0046872 F metal ion binding
367 fe100P02_F_M09
652bp
chromo20/Bm_scaf99
1369550bp
UniRef50_Q7KMS3 (65%/55)
Cluster: Roadblock; n=14; Eukaryota|Rep: Roadblock - Drosophila melanogaster (Fruit fly)
GO:0016319 P mushroom body development
GO:0048813 P dendrite morphogenesis
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0030286 C dynein complex
368 fe100P02_F_M11
649bp
chromo20/Bm_scaf79
1594848bp
UniRef50_P48375 (76%/108)
Cluster: 12 kDa FK506-binding protein; n=24; Eukaryota|Rep: 12 kDa FK506-binding protein - Drosophila melanogaster (Fruit fly)
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0006936 P muscle contraction
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0016020 C membrane
369 fe100P02_F_M13
651bp
chromo14/Bm_scaf81
1583493bp
UniRef50_UPI00015B5E0C (57%/171)
Cluster: PREDICTED: similar to ENSANGP00000003404; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000003404 - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0003723 F RNA binding
GO:0005849 C mRNA cleavage factor complex
GO:0006397 P mRNA processing
GO:0042382 C paraspeckles
370 fe100P02_F_M14
378bp
chromo15/Bm_scaf3
9954263bp
UniRef50_UPI00015B5C7C (87%/74)
Cluster: PREDICTED: similar to ENSANGP00000022151; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000022151 - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
371 fe100P02_F_M17
639bp
chromo11/Bm_scaf16
6248677bp
UniRef50_UPI0000DB747D (53%/32)
Cluster: PREDICTED: similar to CG8669-PA, isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to CG8669-PA, isoform A - Apis mellifera
GO:0004835 F tubulin-tyrosine ligase activity
GO:0006464 P cellular protein modification process
GO:0016874 F ligase activity
372 fe100P02_F_M18
653bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P62241 (37%/177)
Cluster: 40S ribosomal protein S8; n=93; Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
373 fe100P02_F_M22
372bp
unknown/Bm_scaf1242
5249bp
UniRef50_Q24154 (80%/51)
Cluster: 60S ribosomal protein L29; n=12; Endopterygota|Rep: 60S ribosomal protein L29 - Drosophila melanogaster (Fruit fly)
GO:0003682 F chromatin binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0007566 P embryo implantation
GO:0008201 F heparin binding
374 fe100P02_F_M24
653bp
chromo1/Bm_scaf8
8002931bp
UniRef50_Q7RLI9 (40%/35)
Cluster: Asparagine-rich protein; n=5; Plasmodium (Vinckeia)|Rep: Asparagine-rich protein - Plasmodium yoelii yoelii
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0030246 F carbohydrate binding
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0016787 F hydrolase activity
GO:0003824 F catalytic activity
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0015662 F P-type ion transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0030001 P metal ion transport
GO:0046872 F metal ion binding
375 fe100P02_F_N04
508bp
chromo17/Bm_scaf114
978332bp
UniRef50_P62847 (84%/117)
Cluster: 40S ribosomal protein S24; n=212; Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
376 fe100P02_F_N05
648bp
chromo3/Bm_scaf17
6395444bp
UniRef50_UPI0000D56C66 (52%/170)
Cluster: PREDICTED: similar to CG3625-PB, isoform B isoform 2; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG3625-PB, isoform B isoform 2 - Tribolium castaneum
GO:0016021 C integral component of membrane
GO:0005515 F protein binding
377 fe100P02_F_N06
654bp
chromo3/Bm_scaf17
6395444bp
UniRef50_Q9VNE9 (57%/200)
Cluster: 60S ribosomal protein L13A; n=127; Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0007219 P Notch signaling pathway
GO:0008407 P chaeta morphogenesis
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
378 fe100P02_F_N11
650bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q9NR45 (55%/133)
Cluster: Sialic acid synthase; n=39; Coelomata|Rep: Sialic acid synthase - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008781 F N-acylneuraminate cytidylyltransferase activity
GO:0009103 P lipopolysaccharide biosynthetic process
GO:0016051 P carbohydrate biosynthetic process
GO:0016740 F transferase activity
GO:0047444 F N-acylneuraminate-9-phosphate synthase activity
GO:0050462 F N-acetylneuraminate synthase activity
GO:0019007 F N-acylneuraminate-9-phosphate synthase activity
379 fe100P02_F_N12
649bp
chromo4/Bm_scaf13
6731059bp
UniRef50_Q4T4A9 (75%/57)
Cluster: Chromosome undetermined SCAF9757, whole genome shotgun sequence; n=2; Euteleostomi|Rep: Chromosome undetermined SCAF9757, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0006412 P translation
GO:0006446 P regulation of translational initiation
GO:0016281 C eukaryotic translation initiation factor 4F complex
380 fe100P02_F_N14
592bp
chromo5/Bm_scaf20
5834375bp
UniRef50_P36241 (69%/152)
Cluster: 60S ribosomal protein L19; n=141; Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
381 fe100P02_F_N17
440bp
unknown/Bm_scaf239
77624bp
UniRef50_Q556F5 (36%/46)
Cluster: C2H2 type Zn finger-containing protein; n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn finger-containing protein - Dictyostelium discoideum AX4
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0008270 F zinc ion binding
GO:0004177 F aminopeptidase activity
GO:0008451 F obsolete X-Pro aminopeptidase activity
GO:0016787 F hydrolase activity
382 fe100P02_F_N20
588bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P37837 (63%/156)
Cluster: Transaldolase; n=216; cellular organisms|Rep: Transaldolase - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0004801 F transaldolase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0008152 P metabolic process
GO:0016740 F transferase activity
383 fe100P02_F_N21
651bp
chromo21/Bm_scaf86
1549195bp
UniRef50_P18621 (68%/157)
Cluster: 60S ribosomal protein L17; n=135; Eukaryota|Rep: 60S ribosomal protein L17 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
384 fe100P02_F_N24
654bp
chromo10/Bm_scaf10
7317751bp
UniRef50_Q9VUN3 (63%/169)
Cluster: GTP-binding nuclear protein Ran-like; n=88; Eukaryota|Rep: GTP-binding nuclear protein Ran-like - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
385 fe100P02_F_O01
593bp
unknown/Bm_scaf516
16545bp
UniRef50_Q8MR16 (31%/128)
Cluster: LD42289p; n=8; Endopterygota|Rep: LD42289p - Drosophila melanogaster (Fruit fly)
386 fe100P02_F_O03
629bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P46782 (89%/162)
Cluster: 40S ribosomal protein S5; n=150; Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005829 C cytosol
GO:0019843 F rRNA binding
387 fe100P02_F_O05
656bp
unknown/Bm_scaf229
70975bp
UniRef50_A7RYU2 (53%/47)
Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
388 fe100P02_F_O07
450bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5MGF5 (56%/58)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
389 fe100P02_F_O10
589bp
chromo10/Bm_scaf10
7317751bp
UniRef50_Q9VQY9 (51%/171)
Cluster: Probable DNA replication complex GINS protein PSF2; n=6; Endopterygota|Rep: Probable DNA replication complex GINS protein PSF2 - Drosophila melanogaster (Fruit fly)
GO:0000811 C GINS complex
GO:0003711 F transcription elongation regulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0043138 F 3'-5' DNA helicase activity
GO:0045750 P obsolete positive regulation of S phase of mitotic cell cycle
390 fe100P02_F_O14
655bp
chromo16/Bm_scaf4
9119588bp
UniRef50_P13276 (68%/92)
Cluster: Apolipophorin-3 precursor; n=11; Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
previous next from show/5024

- SilkBase 1999-2023 -