SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/5024
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
241 fe100P02_F_B20
656bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q6NL66 (48%/96)
Cluster: RE15795p; n=6; Endopterygota|Rep: RE15795p - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0043169 F cation binding
242 fe100P02_F_B23
654bp
chromo4/Bm_scaf13
6731059bp
UniRef50_Q14240 (66%/192)
Cluster: Eukaryotic initiation factor 4A-II; n=37; Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0006412 P translation
GO:0006446 P regulation of translational initiation
GO:0008026 F helicase activity
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0016787 F hydrolase activity
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
243 fe100P02_F_B24
619bp
chromo11/Bm_scaf35
4373199bp
UniRef50_Q9VMA9 (48%/54)
Cluster: CG31635-PA; n=1; Drosophila melanogaster|Rep: CG31635-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
244 fe100P02_F_C01
402bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9GP16 (96%/121)
Cluster: 60S ribosomal protein L31; n=27; Coelomata|Rep: 60S ribosomal protein L31 - Heliothis virescens (Noctuid moth) (Owlet moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
245 fe100P02_F_C02
653bp
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI00015B42AC (58%/174)
Cluster: PREDICTED: similar to COP9 constitutive photomorphogenic homolog subunit 3; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to COP9 constitutive photomorphogenic homolog subunit 3 - Nasonia vitripennis
GO:0001701 P in utero embryonic development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0008180 C COP9 signalosome
GO:0009416 P response to light stimulus
GO:0005524 F ATP binding
GO:0006139 P nucleobase-containing compound metabolic process
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0019205 F nucleobase-containing compound kinase activity
246 fe100P02_F_C05
654bp
chromo17/Bm_scaf21
5628829bp
UniRef50_Q1HPR4 (88%/160)
Cluster: NADP-dependent oxidoreductase; n=4; Metazoa|Rep: NADP-dependent oxidoreductase - Bombyx mori (Silk moth)
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
247 fe100P02_F_C08
340bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5MGF5 (68%/57)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
248 fe100P02_F_C09
371bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q8IKY9 (41%/48)
Cluster: SEL-1 protein, putative; n=2; Plasmodium|Rep: SEL-1 protein, putative - Plasmodium falciparum (isolate 3D7)
GO:0005488 F binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
249 fe100P02_F_C11
371bp
chromo19/Bm_scaf36
4352778bp
UniRef50_Q9W199 (47%/34)
Cluster: CG4326-PA; n=7; Endopterygota|Rep: CG4326-PA - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
250 fe100P02_F_C13
652bp
chromo23/Bm_scaf12
6701349bp
UniRef50_Q7KUT4 (57%/207)
Cluster: CG8660-PD, isoform D; n=8; Endopterygota|Rep: CG8660-PD, isoform D - Drosophila melanogaster (Fruit fly)
GO:0017134 F fibroblast growth factor binding
GO:0005515 F protein binding
GO:0005624 C obsolete membrane fraction
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0016020 C membrane
251 fe100P02_F_C17
653bp
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI00005A4635 (89%/196)
Cluster: PREDICTED: similar to statin-like; n=2; Canis lupus familiaris|Rep: PREDICTED: similar to statin-like - Canis familiaris
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
252 fe100P02_F_C20
633bp
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI00015B59EA (49%/186)
Cluster: PREDICTED: similar to CG10117-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG10117-PA - Nasonia vitripennis
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0008101 P BMP signaling pathway
GO:0008375 F acetylglucosaminyltransferase activity
GO:0008589 P regulation of smoothened signaling pathway
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030210 P heparin biosynthetic process
GO:0050508 F glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0050509 F N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity
GO:0001501 P skeletal system development
GO:0005789 C endoplasmic reticulum membrane
GO:0007049 P cell cycle
GO:0007165 P signal transduction
GO:0007369 P gastrulation
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0045786 P negative regulation of cell cycle
253 fe100P02_F_C21
445bp
chromo7/Bm_scaf15
6423983bp
UniRef50_P42677 (85%/70)
Cluster: 40S ribosomal protein S27; n=74; Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
254 fe100P02_F_C23
641bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q9H2H8 (65%/160)
Cluster: Peptidyl-prolyl cis-trans isomerase-like 3; n=44; Eukaryota|Rep: Peptidyl-prolyl cis-trans isomerase-like 3 - Homo sapiens (Human)
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006457 P protein folding
GO:0008380 P RNA splicing
GO:0016853 F isomerase activity
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0016567 P protein ubiquitination
255 fe100P02_F_C24
435bp
chromo1/Bm_scaf26
4824072bp
UniRef50_A2IA84 (74%/39)
Cluster: Putative secreted salivary protein; n=1; Xenopsylla cheopis|Rep: Putative secreted salivary protein - Xenopsylla cheopis (oriental rat flea)
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0006118 P obsolete electron transport
GO:0005515 F protein binding
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
256 fe100P02_F_D02
652bp
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI00015B643C (65%/204)
Cluster: PREDICTED: similar to estradiol 17 beta-dehydrogenase; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to estradiol 17 beta-dehydrogenase - Nasonia vitripennis
GO:0005515 F protein binding
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0005498 F sterol binding
GO:0040010 P positive regulation of growth rate
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0004303 F estradiol 17-beta-dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0015248 F sterol transporter activity
GO:0016829 F lyase activity
GO:0016853 F isomerase activity
257 fe100P02_F_D04
390bp
chromo28/Bm_scaf29
4724502bp
UniRef50_P62312 (97%/35)
Cluster: U6 snRNA-associated Sm-like protein LSm6; n=22; Eukaryota|Rep: U6 snRNA-associated Sm-like protein LSm6 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016071 P mRNA metabolic process
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
258 fe100P02_F_D11
430bp
chromo6/Bm_scaf88
1751055bp
UniRef50_O25547 (24%/61)
Cluster: Putative uncharacterized protein; n=1; Helicobacter pylori|Rep: Putative uncharacterized protein - Helicobacter pylori (Campylobacter pylori)
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
259 fe100P02_F_D12
535bp
chromo18/Bm_scaf2
11281751bp
UniRef50_Q9W4Z2 (73%/132)
Cluster: CG14048-PA; n=9; Coelomata|Rep: CG14048-PA - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0005739 C mitochondrion
GO:0030529 C ribonucleoprotein complex
260 fe100P02_F_D13
595bp
chromo6/Bm_scaf11
6993210bp
UniRef50_UPI00015B5BA9 (27%/110)
Cluster: PREDICTED: similar to RE48840p; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to RE48840p - Nasonia vitripennis
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031081 P nuclear pore localization
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0065002 P intracellular protein transmembrane transport
261 fe100P02_F_D14
653bp
chromo28/Bm_scaf29
4724502bp
UniRef50_Q9NPD3 (62%/140)
Cluster: Exosome complex exonuclease RRP41; n=32; Eumetazoa|Rep: Exosome complex exonuclease RRP41 - Homo sapiens (Human)
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0016787 F hydrolase activity
262 fe100P02_F_D16
363bp
chromo17/Bm_scaf21
5628829bp
UniRef50_Q2W2R7 (33%/56)
Cluster: Methyl-accepting chemotaxis protein; n=2; Magnetospirillum|Rep: Methyl-accepting chemotaxis protein - Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
GO:0004871 F obsolete signal transducer activity
GO:0006935 P chemotaxis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0006457 P protein folding
GO:0007286 P spermatid development
GO:0007608 P sensory perception of smell
GO:0009296 P obsolete flagellum assembly
GO:0035058 P non-motile cilium assembly
GO:0035176 P social behavior
GO:0044267 P cellular protein metabolic process
GO:0045494 P photoreceptor cell maintenance
GO:0050910 P detection of mechanical stimulus involved in sensory perception of sound
GO:0051082 F unfolded protein binding
263 fe100P02_F_D17
655bp
chromo10/Bm_scaf70
1945803bp
UniRef50_Q49549 (53%/26)
Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 - Mycoplasma hyorhinis
264 fe100P02_F_D18
651bp
chromo17/Bm_scaf21
5628829bp
UniRef50_A0FDQ7 (100%/126)
Cluster: Putative uncharacterized protein; n=3; Endopterygota|Rep: Putative uncharacterized protein - Bombyx mori (Silk moth)
265 fe100P02_F_D23
486bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9VSC1 (53%/77)
Cluster: Signal recognition particle 9 kDa protein homolog; n=4; Diptera|Rep: Signal recognition particle 9 kDa protein homolog - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008312 F 7S RNA binding
GO:0030529 C ribonucleoprotein complex
GO:0045900 P negative regulation of translational elongation
GO:0048500 C signal recognition particle
GO:0005047 F signal recognition particle binding
GO:0005785 C signal recognition particle receptor complex
GO:0006448 P regulation of translational elongation
266 fe100P02_F_D24
484bp
chromo25/Bm_scaf65
2150616bp
UniRef50_P48588 (73%/115)
Cluster: 40S ribosomal protein S25; n=86; Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila melanogaster (Fruit fly)
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
267 fe100P02_F_E04
651bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q5QP22 (52%/36)
Cluster: RNA binding motif protein 39; n=20; Coelomata|Rep: RNA binding motif protein 39 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0005654 C nucleoplasm
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008380 P RNA splicing
268 fe100P02_F_E06
393bp
chromo25/Bm_scaf65
2150616bp
UniRef50_Q9VH69 (86%/44)
Cluster: 40S ribosomal protein S29; n=31; Eukaryota|Rep: 40S ribosomal protein S29 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
GO:0048666 P neuron development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0015935 C small ribosomal subunit
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040018 P positive regulation of multicellular organism growth
269 fe100P02_F_E07
597bp
chromo12/Bm_scaf67
2138634bp
UniRef50_P19623 (51%/139)
Cluster: Spermidine synthase; n=81; Fungi/Metazoa group|Rep: Spermidine synthase - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0004766 F spermidine synthase activity
GO:0008295 P spermidine biosynthetic process
GO:0016740 F transferase activity
270 fe100P02_F_E08
655bp
chromo5/Bm_scaf20
5834375bp
UniRef50_P61981 (70%/180)
Cluster: 14-3-3 protein gamma; n=627; Eukaryota|Rep: 14-3-3 protein gamma - Homo sapiens (Human)
GO:0005080 F protein kinase C binding
GO:0005159 F insulin-like growth factor receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0006605 P protein targeting
GO:0008426 F protein kinase C inhibitor activity
GO:0009966 P regulation of signal transduction
GO:0019904 F protein domain specific binding
GO:0045664 P regulation of neuron differentiation
GO:0048167 P regulation of synaptic plasticity
GO:0007242 P intracellular signal transduction
GO:0019899 F enzyme binding
previous next from show/5024

- SilkBase 1999-2023 -