SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/1621
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
991 ce--1486
699bp
chromo26/Bm_scaf34
4438494bp
UniRef50_Q4T5R1 (45%/31)
Cluster: Chromosome undetermined SCAF9151, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF9151, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006118 P obsolete electron transport
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0006629 P lipid metabolic process
GO:0008206 P bile acid metabolic process
992 ce--1487
607bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (78%/129)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0000070 P mitotic sister chromatid segregation
GO:0000743 P nuclear migration involved in conjugation with cellular fusion
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005816 C spindle pole body
GO:0005827 C polar microtubule
GO:0005828 C kinetochore microtubule
GO:0005880 C nuclear microtubule
GO:0005881 C cytoplasmic microtubule
GO:0030473 P nuclear migration along microtubule
GO:0045143 P homologous chromosome segregation
993 ce--1488
563bp
chromo8/Bm_scaf76
1642413bp
UniRef50_Q8ILR9 (35%/45)
Cluster: Putative uncharacterized protein; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein - Plasmodium falciparum (isolate 3D7)
994 ce--1489
623bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q9W266 (30%/123)
Cluster: Transmembrane protein windpipe; n=4; Sophophora|Rep: Transmembrane protein windpipe - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0016021 C integral component of membrane
GO:0003779 F actin binding
995 ce--1490
594bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (89%/164)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
996 ce--1491
360bp
unknown/
0bp
UniRef50_UPI00005F9A3A (43%/104)
Cluster: hypothetical protein YfreA_01003873; n=1; Yersinia frederiksenii ATCC 33641|Rep: hypothetical protein YfreA_01003873 - Yersinia frederiksenii ATCC 33641
997 ce--1492
682bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (86%/192)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
998 ce--1493
616bp
chromo16/Bm_scaf4
9119588bp
UniRef50_UPI0000D5654F (80%/82)
Cluster: PREDICTED: similar to CG12626-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG12626-PA - Tribolium castaneum
999 ce--1494
604bp
chromo2/Bm_scaf27
4962828bp
UniRef50_Q22P81 (28%/78)
Cluster: Putative uncharacterized protein; n=1; Tetrahymena thermophila SB210|Rep: Putative uncharacterized protein - Tetrahymena thermophila SB210
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
1000 ce--1495
580bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q07020 (59%/178)
Cluster: 60S ribosomal protein L18; n=124; Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
1001 ce--1496
650bp
chromo1/Bm_scaf26
4824072bp
UniRef50_Q8IBJ2 (47%/44)
Cluster: Putative uncharacterized protein MAL7P1.146; n=2; Plasmodium|Rep: Putative uncharacterized protein MAL7P1.146 - Plasmodium falciparum (isolate 3D7)
1002 ce--1497
668bp
chromo26/Bm_scaf34
4438494bp
UniRef50_P30154 (64%/143)
Cluster: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; n=121; Eukaryota|Rep: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform - Homo sapiens (Human)
GO:0000158 F protein serine/threonine phosphatase activity
GO:0003823 F antigen binding
GO:0005488 F binding
GO:0005515 F protein binding
GO:0046982 F protein heterodimerization activity
1003 ce--1498
650bp
chromo22/Bm_scaf18
5904300bp
UniRef50_Q9BPR4 (100%/183)
Cluster: Cuticle protein; n=1; Bombyx mori|Rep: Cuticle protein - Bombyx mori (Silk moth)
GO:0042302 F structural constituent of cuticle
1004 ce--1499
703bp
chromo25/Bm_scaf46
3255295bp
UniRef50_UPI00003C00BF (62%/160)
Cluster: PREDICTED: similar to CG1523-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG1523-PA - Apis mellifera
GO:0005515 F protein binding
1005 ce--1502
499bp
chromo3/Bm_scaf17
6395444bp
UniRef50_Q5XDA4 (26%/65)
Cluster: Transcriptional regulator; n=37; Streptococcus|Rep: Transcriptional regulator - Streptococcus pyogenes serotype M6
GO:0003677 F DNA binding
GO:0043565 F sequence-specific DNA binding
1006 ce--1503
620bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q9V396 (64%/127)
Cluster: CG7820-PA; n=9; Endopterygota|Rep: CG7820-PA - Drosophila melanogaster (Fruit fly)
GO:0004089 F carbonate dehydratase activity
GO:0006730 P one-carbon metabolic process
GO:0008270 F zinc ion binding
GO:0005737 C cytoplasm
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
1007 ce--1505
660bp
unknown/Bm_scaf14364_contig59574
708bp
UniRef50_Q54DR2 (38%/47)
Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4
GO:0005507 F copper ion binding
GO:0008131 F primary amine oxidase activity
GO:0009308 P amine metabolic process
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0048038 F quinone binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0008270 F zinc ion binding
1008 ce--1506
678bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q16ZN9 (43%/137)
Cluster: Conserved oligomeric Golgi complex component 3; n=4; Diptera|Rep: Conserved oligomeric Golgi complex component 3 - Aedes aegypti (Yellowfever mosquito)
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
1009 ce--1507
676bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (92%/182)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
1010 ce--1508
641bp
chromo17/Bm_scaf21
5628829bp
UniRef50_Q22U33 (45%/31)
Cluster: Potassium cation channel protein; n=1; Tetrahymena thermophila SB210|Rep: Potassium cation channel protein - Tetrahymena thermophila SB210
1011 ce--1509
710bp
chromo1/Bm_scaf8
8002931bp
UniRef50_UPI0000E490F6 (41%/65)
Cluster: PREDICTED: similar to endonuclease-reverse transcriptase; n=5; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to endonuclease-reverse transcriptase - Strongylocentrotus purpuratus
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
1012 ce--1511
633bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (93%/176)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
1013 ce--1512
683bp
chromo6/Bm_scaf49
2969584bp
UniRef50_UPI00015A3FAE (29%/44)
Cluster: Acetyl-CoA acetyltransferase, mitochondrial precursor (EC 2.3.1.9) (Acetoacetyl-CoA thiolase) (T2).; n=1; Danio rerio|Rep: Acetyl-CoA acetyltransferase, mitochondrial precursor (EC 2.3.1.9) (Acetoacetyl-CoA thiolase) (T2). - Danio rerio
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
1014 ce--1515
700bp
chromo22/Bm_scaf18
5904300bp
UniRef50_Q9BPR4 (98%/186)
Cluster: Cuticle protein; n=1; Bombyx mori|Rep: Cuticle protein - Bombyx mori (Silk moth)
GO:0042302 F structural constituent of cuticle
1015 ce--1516
639bp
chromo25/Bm_scaf144
402969bp
UniRef50_Q8ZSX8 (50%/28)
Cluster: Putative uncharacterized protein PAE3533; n=1; Pyrobaculum aerophilum|Rep: Putative uncharacterized protein PAE3533 - Pyrobaculum aerophilum
1016 ce--1517
601bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (93%/177)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
1017 ce--1519
615bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q9NL89 (49%/203)
Cluster: Beta-1,3-glucan-binding protein precursor; n=5; Obtectomera|Rep: Beta-1,3-glucan-binding protein precursor - Bombyx mori (Silk moth)
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006955 P immune response
GO:0008367 F obsolete bacterial cell surface binding
GO:0045087 P innate immune response
GO:0045088 P regulation of innate immune response
GO:0009620 P response to fungus
1018 ce--1520
605bp
chromo8/Bm_scaf161
275540bp
UniRef50_Q53GM6 (78%/189)
Cluster: U5 snRNP-specific protein variant; n=13; Eukaryota|Rep: U5 snRNP-specific protein variant - Homo sapiens (Human)
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0006397 P mRNA processing
GO:0007601 P visual perception
GO:0008380 P RNA splicing
GO:0031202 P RNA splicing, via transesterification reactions
GO:0050896 P response to stimulus
1019 ce--1521
667bp
chromo25/Bm_scaf46
3255295bp
UniRef50_UPI0000D56AF6 (68%/48)
Cluster: PREDICTED: similar to CG33299-PA; n=2; Tribolium castaneum|Rep: PREDICTED: similar to CG33299-PA - Tribolium castaneum
1020 ce--1522
611bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q4Z0C1 (100%/16)
Cluster: Putative uncharacterized protein; n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein - Plasmodium berghei
GO:0000156 F phosphorelay response regulator activity
GO:0000160 P phosphorelay signal transduction system
GO:0006355 P regulation of transcription, DNA-templated
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
previous next from show/1621

- SilkBase 1999-2023 -