SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/1621
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1231 ce--1834
600bp
chromo23/Bm_scaf12
6701349bp
UniRef50_A7HNY1 (53%/32)
Cluster: DNA-directed RNA polymerase, beta' subunit; n=3; Bacteria|Rep: DNA-directed RNA polymerase, beta' subunit - Fervidobacterium nodosum Rt17-B1
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0005515 F protein binding
GO:0007165 P signal transduction
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0004730 F pseudouridylate synthase activity
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
1232 ce--1835
637bp
chromo26/Bm_scaf25
4930657bp
UniRef50_Q0P6N7 (100%/20)
Cluster: Plasma memebrane H+-ATPase; n=1; Plantago major|Rep: Plasma memebrane H+-ATPase - Plantago major (Common plantain)
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0015662 F P-type ion transporter activity
GO:0016020 C membrane
GO:0005509 F calcium ion binding
1233 ce--1836
583bp
unknown/Bm_scaf10192_contig55402
761bp
UniRef50_Q6UV17 (90%/187)
Cluster: Endonuclease and reverse transcriptase-like protein; n=25; Arthropoda|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
1234 ce--1837
640bp
chromo24/Bm_scaf75
1795045bp
UniRef50_Q6UV17 (90%/44)
Cluster: Endonuclease and reverse transcriptase-like protein; n=25; Arthropoda|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
1235 ce--1838
594bp
chromo7/Bm_scaf15
6423983bp
UniRef50_Q9BPR3 (69%/156)
Cluster: Cuticle protein; n=1; Bombyx mori|Rep: Cuticle protein - Bombyx mori (Silk moth)
GO:0042302 F structural constituent of cuticle
GO:0005198 F structural molecule activity
1236 ce--1839
391bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q8TLX5 (40%/27)
Cluster: Predicted protein; n=1; Methanosarcina acetivorans|Rep: Predicted protein - Methanosarcina acetivorans
GO:0005576 C extracellular region
GO:0007268 P chemical synaptic transmission
GO:0009405 P obsolete pathogenesis
GO:0030550 F acetylcholine receptor inhibitor activity
GO:0045211 C postsynaptic membrane
1237 ce--1840
431bp
chromo23/Bm_scaf22
5301712bp
UniRef50_A5KAE3 (29%/62)
Cluster: Ferlin, putative; n=4; Plasmodium|Rep: Ferlin, putative - Plasmodium vivax
GO:0005097 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0032313 P regulation of GTPase activity
1238 ce--1841
693bp
chromo19/Bm_scaf36
4352778bp
UniRef50_Q3LB41 (68%/96)
Cluster: Putative uncharacterized protein; n=2; Obtectomera|Rep: Putative uncharacterized protein - Heliconius melpomene
1239 ce--1842
722bp
unknown/
0bp
UniRef50_P24646 (77%/207)
Cluster: Polyhedrin; n=212; root|Rep: Polyhedrin - Spodoptera littoralis nuclear polyhedrosis virus (SlNPV)
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
1240 ce--1843
682bp
chromo13/Bm_scaf1
16203812bp
UniRef50_A2G3H1 (32%/64)
Cluster: Putative uncharacterized protein; n=1; Trichomonas vaginalis G3|Rep: Putative uncharacterized protein - Trichomonas vaginalis G3
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0003993 F acid phosphatase activity
GO:0003774 F cytoskeletal motor activity
GO:0005874 C microtubule
GO:0019861 C obsolete flagellum
GO:0030286 C dynein complex
1241 ce--1845
654bp
chromo8/Bm_scaf51
2786897bp
UniRef50_Q960E6 (74%/117)
Cluster: SD04748p; n=9; Eukaryota|Rep: SD04748p - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0006414 P translational elongation
1242 ce--1846
603bp
chromo26/Bm_scaf25
4930657bp
UniRef50_Q0CN36 (36%/66)
Cluster: Predicted protein; n=2; Aspergillus|Rep: Predicted protein - Aspergillus terreus (strain NIH 2624)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
1243 ce--1847
751bp
chromo1/Bm_scaf26
4824072bp
UniRef50_UPI0000D55A17 (52%/53)
Cluster: PREDICTED: similar to CCR4-NOT transcription complex, subunit 1 isoform a; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CCR4-NOT transcription complex, subunit 1 isoform a - Tribolium castaneum
GO:0007517 P muscle organ development
GO:0048813 P dendrite morphogenesis
1244 ce--1849
643bp
chromo1/Bm_scaf23
5097954bp
UniRef50_Q4X792 (30%/55)
Cluster: Putative uncharacterized protein; n=1; Plasmodium chabaudi|Rep: Putative uncharacterized protein - Plasmodium chabaudi
GO:0004437 F obsolete inositol or phosphatidylinositol phosphatase activity
1245 ce--1850
635bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (87%/186)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
1246 ce--1851
690bp
chromo19/Bm_scaf100
1353457bp
UniRef50_Q86QT5 (64%/51)
Cluster: Putative uncharacterized protein; n=1; Bombyx mori|Rep: Putative uncharacterized protein - Bombyx mori (Silk moth)
1247 ce--1852
582bp
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI0000D8A031 (34%/75)
Cluster: hypothetical protein, conserved; n=1; Eimeria tenella|Rep: hypothetical protein, conserved - Eimeria tenella
GO:0005739 C mitochondrion
1248 ce--1853
562bp
unknown/Bm_scaf1363
4320bp
UniRef50_A4FSG8 (75%/29)
Cluster: Putative uncharacterized protein; n=1; Thermobia domestica|Rep: Putative uncharacterized protein - Thermobia domestica (firebrat)
1249 ce--1855
685bp
chromo8/Bm_scaf58
2336930bp
UniRef50_O81990 (42%/40)
Cluster: Putative transcription repressor HOTR; n=3; BEP clade|Rep: Putative transcription repressor HOTR - Hordeum vulgare (Barley)
GO:0004518 F nuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006281 P DNA repair
1250 ce--1856
666bp
chromo15/Bm_scaf64
2197771bp
UniRef50_Q9VNB9 (67%/113)
Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0002119 P nematode larval development
GO:0007276 P gamete generation
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0018987 P water homeostasis
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040017 P positive regulation of locomotion
1251 ce--1857
830bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q5C0A4 (95%/21)
Cluster: SJCHGC09205 protein; n=1; Schistosoma japonicum|Rep: SJCHGC09205 protein - Schistosoma japonicum (Blood fluke)
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0015662 F P-type ion transporter activity
GO:0016020 C membrane
GO:0005509 F calcium ion binding
1252 ce--1859
680bp
chromo10/Bm_scaf10
7317751bp
(no hit)
1253 ce--1860
695bp
chromo7/Bm_scaf15
6423983bp
UniRef50_Q8WPH0 (55%/170)
Cluster: Annexin B13a; n=2; Bombyx mori|Rep: Annexin B13a - Bombyx mori (Silk moth)
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0007155 P cell adhesion
GO:0008360 P regulation of cell shape
1254 ce--1861
644bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (93%/189)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
1255 ce--1863
329bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (81%/99)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
1256 ce--1864
487bp
chromo17/Bm_scaf33
4426693bp
UniRef50_O65314 (86%/61)
Cluster: Actin; n=20; Eukaryota|Rep: Actin - Scherffelia dubia
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
1257 ce--1865
756bp
chromo1/Bm_scaf8
8002931bp
UniRef50_Q9VYY9 (38%/207)
Cluster: CG11727-PA, isoform A; n=8; Endopterygota|Rep: CG11727-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005097 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0032313 P regulation of GTPase activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0051301 P cell division
1258 ce--1867
719bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (89%/188)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
1259 ce--1868
660bp
chromo10/Bm_scaf10
7317751bp
UniRef50_Q6FT84 (33%/63)
Cluster: Similar to sp|Q12236 Saccharomyces cerevisiae YOL100w PKH2; n=1; Candida glabrata|Rep: Similar to sp|Q12236 Saccharomyces cerevisiae YOL100w PKH2 - Candida glabrata (Yeast) (Torulopsis glabrata)
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0005739 C mitochondrion
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0042773 P ATP synthesis coupled electron transport
1260 ce--1870
616bp
chromo2/Bm_scaf118
704489bp
UniRef50_Q4DEV9 (34%/55)
Cluster: Putative uncharacterized protein; n=2; Trypanosoma cruzi|Rep: Putative uncharacterized protein - Trypanosoma cruzi
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0008270 F zinc ion binding
GO:0006808 P regulation of nitrogen utilization
GO:0016564 F obsolete transcription repressor activity
previous next from show/1621

- SilkBase 1999-2023 -