SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/33462
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
541 fcaL-P01_pT_K03
708bp
unknown/Bm_scaf186
120459bp
UniRef50_Q9BWJ5 (83%/71)
Cluster: Splicing factor 3B subunit 5; n=16; Eukaryota|Rep: Splicing factor 3B subunit 5 - Homo sapiens (Human)
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0005829 C cytosol
542 fcaL-P01_pT_K04
725bp
chromo3/Bm_scaf102
1187377bp
UniRef50_Q3AB51 (31%/45)
Cluster: Putative membrane protein; n=1; Carboxydothermus hydrogenoformans Z-2901|Rep: Putative membrane protein - Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008)
543 fcaL-P01_pT_K05
611bp
chromo24/Bm_scaf75
1795045bp
UniRef50_Q08JX1 (39%/151)
Cluster: Alkaline nuclease; n=1; Bombyx mori|Rep: Alkaline nuclease - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
544 fcaL-P01_pT_K06
419bp
chromo1/Bm_scaf23
5097954bp
UniRef50_P49630 (61%/94)
Cluster: 60S ribosomal protein L36 (Protein minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein L36 (Protein minute(1)1B) - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005730 C nucleolus
GO:0005842 C cytosolic large ribosomal subunit
545 fcaL-P01_pT_K08
810bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q7QDD6 (54%/221)
Cluster: ENSANGP00000021449; n=3; Endopterygota|Rep: ENSANGP00000021449 - Anopheles gambiae str. PEST
GO:0006464 P cellular protein modification process
GO:0008474 F palmitoyl-(protein) hydrolase activity
GO:0002084 P protein depalmitoylation
GO:0005576 C extracellular region
GO:0005624 C obsolete membrane fraction
GO:0005634 C nucleus
GO:0005764 C lysosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006309 P apoptotic DNA fragmentation
GO:0006898 P receptor-mediated endocytosis
GO:0006907 P pinocytosis
GO:0007042 P lysosomal lumen acidification
GO:0007399 P nervous system development
GO:0007420 P brain development
GO:0007601 P visual perception
GO:0008021 C synaptic vesicle
GO:0015031 P protein transport
GO:0016042 P lipid catabolic process
GO:0016290 F palmitoyl-CoA hydrolase activity
GO:0016787 F hydrolase activity
GO:0030149 P sphingolipid catabolic process
GO:0030163 P protein catabolic process
GO:0030308 P negative regulation of cell growth
GO:0030424 C axon
GO:0031579 P membrane raft organization
GO:0043066 P negative regulation of apoptotic process
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045121 C membrane raft
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048549 P positive regulation of pinocytosis
GO:0048666 P neuron development
GO:0050803 P regulation of synapse structure or activity
GO:0050896 P response to stimulus
GO:0051181 P obsolete cofactor transport
GO:0051186 P obsolete cofactor metabolic process
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008340 P determination of adult lifespan
546 fcaL-P01_pT_K09
730bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P62888 (80%/56)
Cluster: 60S ribosomal protein L30; n=127; Eukaryota|Rep: 60S ribosomal protein L30 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005830 C cytosolic ribosome
547 fcaL-P01_pT_K11
384bp
unknown/Bm_scaf6711_contig51921
868bp
UniRef50_Q9VH24 (58%/56)
Cluster: CG31477-PA; n=15; Coelomata|Rep: CG31477-PA - Drosophila melanogaster (Fruit fly)
GO:0005739 C mitochondrion
GO:0015986 P ATP synthesis coupled proton transport
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015992 P proton transmembrane transport
GO:0016787 F hydrolase activity
GO:0045261 C proton-transporting ATP synthase complex, catalytic core F(1)
GO:0046872 F metal ion binding
548 fcaL-P01_pT_K12
501bp
chromo15/Bm_scaf64
2197771bp
UniRef50_Q9VNB9 (64%/103)
Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
549 fcaL-P01_pT_K14
691bp
chromo5/Bm_scaf20
5834375bp
UniRef50_UPI0000F2117C (35%/64)
Cluster: PREDICTED: hypothetical protein; n=1; Danio rerio|Rep: PREDICTED: hypothetical protein - Danio rerio
GO:0019012 C virion component
GO:0004182 F obsolete carboxypeptidase A activity
GO:0006508 P proteolysis
GO:0008270 F zinc ion binding
550 fcaL-P01_pT_K15
680bp
chromo22/Bm_scaf18
5904300bp
UniRef50_UPI00015B5C6E (42%/163)
Cluster: PREDICTED: similar to DNA binding protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to DNA binding protein - Nasonia vitripennis
551 fcaL-P01_pT_K16
783bp
chromo27/Bm_scaf128
620300bp
UniRef50_O34718 (41%/56)
Cluster: Major myo-inositol transporter iolT; n=13; Firmicutes|Rep: Major myo-inositol transporter iolT - Bacillus subtilis
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
552 fcaL-P01_pT_K17
614bp
chromo5/Bm_scaf20
5834375bp
UniRef50_P36241 (69%/195)
Cluster: 60S ribosomal protein L19; n=141; Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
553 fcaL-P01_pT_K18
681bp
unknown/Bm_scaf1453
4011bp
UniRef50_P00408 (52%/216)
Cluster: Cytochrome c oxidase subunit 2; n=4696; Metazoa|Rep: Cytochrome c oxidase subunit 2 - Drosophila melanogaster (Fruit fly)
GO:0004129 F cytochrome-c oxidase activity
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
554 fcaL-P01_pT_K19
520bp
chromo10/Bm_scaf30
4522305bp
(no hit)
555 fcaL-P01_pT_K20
487bp
chromo3/Bm_scaf63
2158332bp
UniRef50_Q10731 (35%/82)
Cluster: Fungal protease inhibitor F precursor; n=1; Bombyx mori|Rep: Fungal protease inhibitor F precursor - Bombyx mori (Silk moth)
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
556 fcaL-P01_pT_K21
568bp
chromo15/Bm_scaf3
9954263bp
UniRef50_UPI0000D572EA (51%/160)
Cluster: PREDICTED: similar to CG3192-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG3192-PA, isoform A - Tribolium castaneum
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0006118 P obsolete electron transport
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0005747 C mitochondrial respiratory chain complex I
GO:0005783 C endoplasmic reticulum
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
557 fcaL-P01_pT_K22
877bp
chromo12/Bm_scaf109
991363bp
(no hit)
558 fcaL-P01_pT_K23
692bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P29117 (80%/125)
Cluster: Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor; n=4; Eukaryota|Rep: Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor - Rattus norvegicus (Rat)
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0042277 F peptide binding
GO:0005624 C obsolete membrane fraction
GO:0005737 C cytoplasm
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016018 F cyclosporin A binding
GO:0045449 P regulation of transcription, DNA-templated
559 fcaL-P01_pT_K24
782bp
chromo23/Bm_scaf139
534598bp
UniRef50_P82205 (100%/154)
Cluster: Superoxide dismutase [Cu-Zn]; n=5; Endopterygota|Rep: Superoxide dismutase [Cu-Zn] - Bombyx mori (Silk moth)
GO:0004784 F superoxide dismutase activity
GO:0004785 F superoxide dismutase activity
GO:0005507 F copper ion binding
GO:0005737 C cytoplasm
GO:0006801 P superoxide metabolic process
GO:0008270 F zinc ion binding
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0000187 P obsolete activation of MAPK activity
GO:0000302 P response to reactive oxygen species
GO:0000303 P response to superoxide
GO:0001541 P ovarian follicle development
GO:0001819 P positive regulation of cytokine production
GO:0001895 P retina homeostasis
GO:0002262 P myeloid cell homeostasis
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006302 P double-strand break repair
GO:0006309 P apoptotic DNA fragmentation
GO:0006749 P glutathione metabolic process
GO:0006879 P cellular iron ion homeostasis
GO:0006979 P response to oxidative stress
GO:0007283 P spermatogenesis
GO:0007566 P embryo implantation
GO:0007568 P aging
GO:0007569 P cell aging
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008217 P regulation of blood pressure
GO:0009408 P response to heat
GO:0010033 P response to organic substance
GO:0019226 P transmission of nerve impulse
GO:0019430 P removal of superoxide radicals
GO:0030346 F protein phosphatase 2B binding
GO:0031012 C extracellular matrix
GO:0031410 C cytoplasmic vesicle
GO:0032287 P peripheral nervous system myelin maintenance
GO:0032839 C dendrite cytoplasm
GO:0040014 P regulation of multicellular organism growth
GO:0042493 P response to xenobiotic stimulus
GO:0042542 P response to hydrogen peroxide
GO:0042554 P superoxide anion generation
GO:0043025 C neuronal cell body
GO:0043066 P negative regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:0043234 C protein-containing complex
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045471 P response to ethanol
GO:0045541 P negative regulation of cholesterol biosynthetic process
GO:0045859 P regulation of protein kinase activity
GO:0046716 P muscle cell cellular homeostasis
GO:0048678 P response to axon injury
GO:0050665 P hydrogen peroxide biosynthetic process
GO:0051087 F chaperone binding
GO:0051881 P regulation of mitochondrial membrane potential
GO:0060047 P heart contraction
GO:0060052 P neurofilament cytoskeleton organization
GO:0060087 P relaxation of vascular associated smooth muscle
GO:0060088 P auditory receptor cell stereocilium organization
GO:0001890 P placenta development
GO:0005759 C mitochondrial matrix
GO:0005777 C peroxisome
GO:0033081 P regulation of T cell differentiation in thymus
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0046620 P regulation of organ growth
GO:0048538 P thymus development
560 fcaL-P01_pT_L02
627bp
chromo3/Bm_scaf17
6395444bp
UniRef50_Q7T2B9 (57%/88)
Cluster: Myotrophin; n=5; Euteleostomi|Rep: Myotrophin - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0016049 P cell growth
GO:0016202 P regulation of striated muscle tissue development
GO:0030182 P neuron differentiation
561 fcaL-P01_pT_L03
453bp
chromo11/Bm_scaf16
6248677bp
UniRef50_O95166 (90%/116)
Cluster: Gamma-aminobutyric acid receptor-associated protein (GABA(A) receptor- associated protein); n=18; root|Rep: Gamma-aminobutyric acid receptor-associated protein (GABA(A) receptor- associated protein) - Homo sapiens (Human)
GO:0000226 P microtubule cytoskeleton organization
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005790 C smooth endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0006605 P protein targeting
GO:0006810 P transport
GO:0007268 P chemical synaptic transmission
GO:0008017 F microtubule binding
GO:0015031 P protein transport
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0048487 F beta-tubulin binding
GO:0050811 F GABA receptor binding
GO:0006914 P autophagy
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040024 P dauer larval development
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0006512 P obsolete ubiquitin cycle
562 fcaL-P01_pT_L04
512bp
chromo12/Bm_scaf84
1632705bp
UniRef50_P20227 (91%/102)
Cluster: TATA-box-binding protein; n=7; Eukaryota|Rep: TATA-box-binding protein - Drosophila melanogaster (Fruit fly)
GO:0000126 C transcription factor TFIIIB complex
GO:0003677 F DNA binding
GO:0003702 F obsolete RNA polymerase II transcription factor activity
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0005669 C transcription factor TFIID complex
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0042796 P snRNA transcription by RNA polymerase III
GO:0042797 P tRNA transcription by RNA polymerase III
GO:0000120 C RNA polymerase I transcription regulator complex
GO:0003700 F DNA-binding transcription factor activity
GO:0006366 P transcription by RNA polymerase II
GO:0008219 P cell death
GO:0016251 F RNA polymerase II general transcription initiation factor activity
563 fcaL-P01_pT_L05
710bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P62906 (62%/135)
Cluster: 60S ribosomal protein L10a; n=212; Eukaryota|Rep: 60S ribosomal protein L10a - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0009653 P anatomical structure morphogenesis
GO:0030529 C ribonucleoprotein complex
564 fcaL-P01_pT_L06
596bp
chromo11/Bm_scaf16
6248677bp
UniRef50_P19109 (75%/74)
Cluster: ATP-dependent RNA helicase p62; n=9; Eukaryota|Rep: ATP-dependent RNA helicase p62 - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0008026 F helicase activity
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0019730 P antimicrobial humoral response
GO:0031047 P gene silencing by RNA
565 fcaL-P01_pT_L07
737bp
chromo28/Bm_scaf29
4724502bp
UniRef50_Q4JSC0 (91%/171)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
566 fcaL-P01_pT_L09
530bp
chromo8/Bm_scaf58
2336930bp
UniRef50_O02387 (89%/143)
Cluster: Larval cuticle protein LCP-17 precursor; n=1; Bombyx mori|Rep: Larval cuticle protein LCP-17 precursor - Bombyx mori (Silk moth)
GO:0005198 F structural molecule activity
GO:0042302 F structural constituent of cuticle
567 fcaL-P01_pT_L10
469bp
unknown/Bm_scaf1114_contig45323
5376bp
UniRef50_P62910 (80%/94)
Cluster: 60S ribosomal protein L32; n=83; Eukaryota|Rep: 60S ribosomal protein L32 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
568 fcaL-P01_pT_L11
632bp
chromo16/Bm_scaf4
9119588bp
(no hit)
569 fcaL-P01_pT_L14
479bp
chromo9/Bm_scaf14
6760189bp
UniRef50_Q7Q678 (55%/83)
Cluster: ENSANGP00000010714; n=5; Endopterygota|Rep: ENSANGP00000010714 - Anopheles gambiae str. PEST
GO:0042302 F structural constituent of cuticle
GO:0005515 F protein binding
GO:0005198 F structural molecule activity
570 fcaL-P01_pT_L16
754bp
chromo3/Bm_scaf17
6395444bp
UniRef50_P24534 (50%/204)
Cluster: Elongation factor 1-beta; n=90; Eukaryota|Rep: Elongation factor 1-beta - Homo sapiens (Human)
GO:0003746 F translation elongation factor activity
GO:0005515 F protein binding
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0004871 F obsolete signal transducer activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0008135 F translation factor activity, RNA binding
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
previous next from show/33462

- SilkBase 1999-2023 -