SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/33462
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
451 fcaL-P01_pT_F14
562bp
chromo23/Bm_scaf22
5301712bp
UniRef50_Q7NC07 (29%/57)
Cluster: Putative uncharacterized protein; n=1; Mycoplasma gallisepticum|Rep: Putative uncharacterized protein - Mycoplasma gallisepticum
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0008270 F zinc ion binding
452 fcaL-P01_pT_F15
397bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q5MGF5 (58%/58)
Cluster: Putative uncharacterized protein; n=2; Bombycoidea|Rep: Putative uncharacterized protein - Lonomia obliqua (Moth)
GO:0004219 F obsolete pyroglutamyl-peptidase I activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
453 fcaL-P01_pT_F16
434bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P08570 (88%/67)
Cluster: 60S acidic ribosomal protein P1; n=15; Eukaryota|Rep: 60S acidic ribosomal protein P1 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
454 fcaL-P01_pT_F17
821bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P15880 (79%/216)
Cluster: 40S ribosomal protein S2; n=284; Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005829 C cytosol
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006450 P regulation of translational fidelity
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
455 fcaL-P01_pT_F18
609bp
chromo19/Bm_scaf28
4702674bp
UniRef50_UPI00006CB3FB (31%/58)
Cluster: hypothetical protein TTHERM_00474800; n=1; Tetrahymena thermophila SB210|Rep: hypothetical protein TTHERM_00474800 - Tetrahymena thermophila SB210
456 fcaL-P01_pT_F19
771bp
chromo10/Bm_scaf70
1945803bp
UniRef50_UPI00015B567B (80%/84)
Cluster: PREDICTED: similar to ribosomal protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ribosomal protein L23Ae - Nasonia vitripennis
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006334 P nucleosome assembly
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
457 fcaL-P01_pT_F20
577bp
unknown/Bm_scaf1453
4011bp
UniRef50_P34842 (59%/174)
Cluster: Cytochrome c oxidase subunit 3; n=18; cellular organisms|Rep: Cytochrome c oxidase subunit 3 - Anopheles gambiae (African malaria mosquito)
GO:0004129 F cytochrome-c oxidase activity
GO:0005739 C mitochondrion
GO:0006118 P obsolete electron transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0006123 P mitochondrial electron transport, cytochrome c to oxygen
458 fcaL-P01_pT_F21
656bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q92947 (72%/207)
Cluster: Glutaryl-CoA dehydrogenase, mitochondrial precursor; n=271; cellular organisms|Rep: Glutaryl-CoA dehydrogenase, mitochondrial precursor - Homo sapiens (Human)
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0004361 F glutaryl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006118 P obsolete electron transport
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F flavin adenine dinucleotide binding
459 fcaL-P01_pT_F23
746bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q05639 (79%/154)
Cluster: Elongation factor 1-alpha 2; n=8397; root|Rep: Elongation factor 1-alpha 2 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
460 fcaL-P01_pT_F24
684bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q5UAT5 (85%/217)
Cluster: 60S ribosomal protein L6; n=15; Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori (Silk moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0006355 P regulation of transcription, DNA-templated
461 fcaL-P01_pT_G01
780bp
unknown/Bm_scaf583
13651bp
UniRef50_UPI00015B5B2A (40%/232)
Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0042802 F identical protein binding
462 fcaL-P01_pT_G03
582bp
chromo22/Bm_scaf18
5904300bp
UniRef50_Q25504 (64%/79)
Cluster: Larval cuticle protein 16/17 precursor; n=5; Obtectomera|Rep: Larval cuticle protein 16/17 precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005198 F structural molecule activity
GO:0042302 F structural constituent of cuticle
463 fcaL-P01_pT_G05
732bp
chromo4/Bm_scaf5
8683647bp
UniRef50_P35232 (76%/182)
Cluster: Prohibitin; n=109; Eukaryota|Rep: Prohibitin - Homo sapiens (Human)
GO:0000074 P regulation of cell cycle
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005887 C integral component of plasma membrane
GO:0006260 P DNA replication
GO:0007165 P signal transduction
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016563 F obsolete transcription activator activity
GO:0016564 F obsolete transcription repressor activity
GO:0016575 P histone deacetylation
GO:0042981 P regulation of apoptotic process
GO:0045449 P regulation of transcription, DNA-templated
464 fcaL-P01_pT_G06
511bp
chromo15/Bm_scaf42
3822572bp
UniRef50_Q4KTH7 (47%/134)
Cluster: 60S acidic ribosomal protein P0; n=3; Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites domuncula (Sponge)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
465 fcaL-P01_pT_G08
490bp
chromo28/Bm_scaf47
3212212bp
UniRef50_P62280 (76%/118)
Cluster: 40S ribosomal protein S11; n=65; Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
466 fcaL-P01_pT_G09
635bp
unknown/
0bp
UniRef50_UPI00015B4A72 (50%/140)
Cluster: PREDICTED: similar to conserved hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to conserved hypothetical protein - Nasonia vitripennis
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
467 fcaL-P01_pT_G10
760bp
chromo16/Bm_scaf124
657554bp
UniRef50_P40227 (65%/195)
Cluster: T-complex protein 1 subunit zeta; n=71; Eukaryota|Rep: T-complex protein 1 subunit zeta - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0044267 P cellular protein metabolic process
GO:0051082 F unfolded protein binding
468 fcaL-P01_pT_G11
513bp
chromo22/Bm_scaf69
2045043bp
UniRef50_Q4Z6F8 (35%/57)
Cluster: Putative uncharacterized protein; n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein - Plasmodium berghei
469 fcaL-P01_pT_G12
453bp
chromo19/Bm_scaf28
4702674bp
(no hit)
470 fcaL-P01_pT_G13
497bp
chromo15/Bm_scaf64
2197771bp
UniRef50_Q9VNB9 (60%/76)
Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
471 fcaL-P01_pT_G14
414bp
chromo15/Bm_scaf3
9954263bp
UniRef50_UPI0000E4954F (42%/42)
Cluster: PREDICTED: hypothetical protein; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED: hypothetical protein - Strongylocentrotus purpuratus
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0016887 F ATP hydrolysis activity
GO:0017111 F nucleoside-triphosphatase activity
472 fcaL-P01_pT_G15
862bp
chromo17/Bm_scaf92
1585222bp
UniRef50_Q961V9 (53%/177)
Cluster: GH03273p; n=8; Endopterygota|Rep: GH03273p - Drosophila melanogaster (Fruit fly)
GO:0016787 F hydrolase activity
GO:0000287 F magnesium ion binding
GO:0030145 F manganese ion binding
GO:0046872 F metal ion binding
473 fcaL-P01_pT_G16
612bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q5TU39 (67%/178)
Cluster: ENSANGP00000025440; n=5; Endopterygota|Rep: ENSANGP00000025440 - Anopheles gambiae str. PEST
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
474 fcaL-P01_pT_G18
702bp
chromo10/Bm_scaf44
3277875bp
UniRef50_Q9XXW0 (77%/49)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
475 fcaL-P01_pT_G19
745bp
chromo28/Bm_scaf62
2278642bp
UniRef50_Q6Q2D3 (70%/199)
Cluster: Serpin-5B; n=2; Obtectomera|Rep: Serpin-5B - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0008233 F peptidase activity
476 fcaL-P01_pT_G20
802bp
unknown/Bm_scaf1453
4011bp
UniRef50_Q9MIY8 (63%/207)
Cluster: Cytochrome c oxidase subunit 1; n=861; root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0004129 F cytochrome-c oxidase activity
GO:0005506 F iron ion binding
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0051597 P response to methylmercury
GO:0005515 F protein binding
GO:0006123 P mitochondrial electron transport, cytochrome c to oxygen
477 fcaL-P01_pT_G21
572bp
chromo10/Bm_scaf44
3277875bp
UniRef50_P47948 (70%/141)
Cluster: Troponin C, isoform 2; n=32; Neoptera|Rep: Troponin C, isoform 2 - Drosophila melanogaster (Fruit fly)
GO:0001539 P cilium or flagellum-dependent cell motility
GO:0005509 F calcium ion binding
GO:0009288 C bacterial-type flagellum
478 fcaL-P01_pT_G22
670bp
chromo28/Bm_scaf29
4724502bp
UniRef50_Q4JSC0 (92%/134)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
479 fcaL-P01_pT_G23
707bp
chromo15/Bm_scaf42
3822572bp
UniRef50_P33993 (51%/201)
Cluster: DNA replication licensing factor MCM7; n=52; Eukaryota|Rep: DNA replication licensing factor MCM7 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0017111 F nucleoside-triphosphatase activity
GO:0042325 P regulation of phosphorylation
GO:0042555 C MCM complex
GO:0004386 F helicase activity
GO:0000084 P mitotic S phase
GO:0003682 F chromatin binding
GO:0003688 F DNA replication origin binding
GO:0003712 F transcription coregulator activity
GO:0005656 C nuclear pre-replicative complex
GO:0005737 C cytoplasm
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0009378 F four-way junction helicase activity
GO:0031261 C DNA replication preinitiation complex
GO:0043140 F 3'-5' DNA helicase activity
480 fcaL-P01_pT_G24
777bp
chromo11/Bm_scaf16
6248677bp
UniRef50_P19109 (72%/96)
Cluster: ATP-dependent RNA helicase p62; n=9; Eukaryota|Rep: ATP-dependent RNA helicase p62 - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0008026 F helicase activity
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0019730 P antimicrobial humoral response
GO:0031047 P gene silencing by RNA
previous next from show/33462

- SilkBase 1999-2023 -