SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/33462
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
241 fcaL-P01_F_L04
689bp
chromo12/Bm_scaf84
1632705bp
UniRef50_P20227 (83%/31)
Cluster: TATA-box-binding protein; n=7; Eukaryota|Rep: TATA-box-binding protein - Drosophila melanogaster (Fruit fly)
GO:0000126 C transcription factor TFIIIB complex
GO:0003677 F DNA binding
GO:0003702 F obsolete RNA polymerase II transcription factor activity
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0005669 C transcription factor TFIID complex
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0042796 P snRNA transcription by RNA polymerase III
GO:0042797 P tRNA transcription by RNA polymerase III
GO:0000120 C RNA polymerase I transcription regulator complex
GO:0003700 F DNA-binding transcription factor activity
GO:0006366 P transcription by RNA polymerase II
GO:0008219 P cell death
GO:0016251 F RNA polymerase II general transcription initiation factor activity
242 fcaL-P01_F_L06
676bp
chromo11/Bm_scaf16
6248677bp
UniRef50_P19109 (65%/130)
Cluster: ATP-dependent RNA helicase p62; n=9; Eukaryota|Rep: ATP-dependent RNA helicase p62 - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0008026 F helicase activity
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0019730 P antimicrobial humoral response
GO:0031047 P gene silencing by RNA
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0006364 P rRNA processing
GO:0042254 P ribosome biogenesis
243 fcaL-P01_F_L07
698bp
chromo28/Bm_scaf29
4724502bp
UniRef50_Q4JSC0 (93%/204)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
244 fcaL-P01_F_L09
505bp
chromo8/Bm_scaf58
2336930bp
UniRef50_O02387 (100%/102)
Cluster: Larval cuticle protein LCP-17 precursor; n=1; Bombyx mori|Rep: Larval cuticle protein LCP-17 precursor - Bombyx mori (Silk moth)
GO:0005198 F structural molecule activity
GO:0042302 F structural constituent of cuticle
245 fcaL-P01_F_L10
543bp
unknown/Bm_scaf1114_contig45323
5376bp
UniRef50_P62910 (80%/133)
Cluster: 60S ribosomal protein L32; n=83; Eukaryota|Rep: 60S ribosomal protein L32 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0005842 C cytosolic large ribosomal subunit
246 fcaL-P01_F_L12
782bp
chromo23/Bm_scaf22
5301712bp
UniRef50_UPI0000D557F5 (57%/116)
Cluster: PREDICTED: similar to CG13901-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG13901-PA - Tribolium castaneum
GO:0005515 F protein binding
247 fcaL-P01_F_L13
825bp
unknown/Bm_scaf519
16371bp
UniRef50_Q16R18 (47%/207)
Cluster: Molybdopterin-binding; n=2; Culicidae|Rep: Molybdopterin-binding - Aedes aegypti (Yellowfever mosquito)
GO:0008152 P metabolic process
GO:0016740 F transferase activity
248 fcaL-P01_F_L14
536bp
chromo9/Bm_scaf14
6760189bp
UniRef50_Q7Q678 (55%/83)
Cluster: ENSANGP00000010714; n=5; Endopterygota|Rep: ENSANGP00000010714 - Anopheles gambiae str. PEST
GO:0042302 F structural constituent of cuticle
GO:0005515 F protein binding
GO:0005198 F structural molecule activity
249 fcaL-P01_F_L15
693bp
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D5619F (43%/82)
Cluster: PREDICTED: similar to CG6604-PA; n=4; Endopterygota|Rep: PREDICTED: similar to CG6604-PA - Tribolium castaneum
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
GO:0035050 P embryonic heart tube development
GO:0042684 P cardioblast cell fate commitment
GO:0045449 P regulation of transcription, DNA-templated
250 fcaL-P01_F_L16
618bp
chromo3/Bm_scaf17
6395444bp
UniRef50_P24534 (48%/177)
Cluster: Elongation factor 1-beta; n=90; Eukaryota|Rep: Elongation factor 1-beta - Homo sapiens (Human)
GO:0003746 F translation elongation factor activity
GO:0005515 F protein binding
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
251 fcaL-P01_F_L17
792bp
chromo12/Bm_scaf6
8265254bp
UniRef50_UPI0000D56975 (46%/155)
Cluster: PREDICTED: similar to CG9518-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG9518-PA - Tribolium castaneum
252 fcaL-P01_F_L18
744bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P62424 (65%/179)
Cluster: 60S ribosomal protein L7a; n=226; Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005624 C obsolete membrane fraction
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0042788 C polysomal ribosome
253 fcaL-P01_F_L19
568bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P62263 (69%/139)
Cluster: 40S ribosomal protein S14; n=231; cellular organisms|Rep: 40S ribosomal protein S14 - Homo sapiens (Human)
GO:0000028 P ribosomal small subunit assembly
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030490 P maturation of SSU-rRNA
GO:0030529 C ribonucleoprotein complex
GO:0045892 P negative regulation of transcription, DNA-templated
254 fcaL-P01_F_L21
568bp
chromo24/Bm_scaf103
1218440bp
UniRef50_Q2F5Z1 (87%/175)
Cluster: Lysosomal thiol reductase IP30 isoform 1; n=2; Bombyx mori|Rep: Lysosomal thiol reductase IP30 isoform 1 - Bombyx mori (Silk moth)
255 fcaL-P01_F_L22
695bp
chromo22/Bm_scaf61
2256882bp
UniRef50_P12004 (67%/180)
Cluster: Proliferating cell nuclear antigen; n=83; Eukaryota|Rep: Proliferating cell nuclear antigen - Homo sapiens (Human)
GO:0000074 P regulation of cell cycle
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005652 C nuclear lamina
GO:0005657 C replication fork
GO:0005663 C DNA replication factor C complex
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006281 P DNA repair
GO:0006287 P base-excision repair, gap-filling
GO:0006886 P intracellular protein transport
GO:0008283 P cell population proliferation
GO:0030337 F DNA polymerase processivity factor activity
GO:0032405 F MutLalpha complex binding
GO:0043626 C PCNA complex
GO:0048015 P phosphatidylinositol-mediated signaling
256 fcaL-P01_F_L23
549bp
chromo9/Bm_scaf41
3857564bp
UniRef50_Q9VB76 (51%/174)
Cluster: CG6074-PA; n=6; Diptera|Rep: CG6074-PA - Drosophila melanogaster (Fruit fly)
GO:0004089 F carbonate dehydratase activity
GO:0006730 P one-carbon metabolic process
GO:0008270 F zinc ion binding
257 fcaL-P01_F_L24
670bp
chromo23/Bm_scaf31
4559070bp
UniRef50_Q56CY6 (68%/223)
Cluster: Acetoacetyl-CoA thiolase; n=5; cellular organisms|Rep: Acetoacetyl-CoA thiolase - Dendroctonus jeffreyi (Jeffrey pine beetle)
GO:0008415 F acyltransferase activity
GO:0016740 F transferase activity
GO:0003985 F acetyl-CoA C-acetyltransferase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
258 fcaL-P01_F_M01
729bp
chromo16/Bm_scaf4
9119588bp
UniRef50_UPI0000DB7338 (43%/88)
Cluster: PREDICTED: hypothetical protein; n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein - Apis mellifera
259 fcaL-P01_F_M02
603bp
unknown/Bm_scaf410
39019bp
UniRef50_Q961I4 (38%/202)
Cluster: GH21853p; n=3; Sophophora|Rep: GH21853p - Drosophila melanogaster (Fruit fly)
GO:0007286 P spermatid development
260 fcaL-P01_F_M03
434bp
unknown/Bm_scaf1453
4011bp
UniRef50_Q4FH11 (56%/144)
Cluster: Cytochrome c oxidase subunit I; n=26; Bilateria|Rep: Cytochrome c oxidase subunit I - Samia cynthia ricini (Indian eri silkmoth)
GO:0004129 F cytochrome-c oxidase activity
GO:0005506 F iron ion binding
GO:0005507 F copper ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0009060 P aerobic respiration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0051597 P response to methylmercury
261 fcaL-P01_F_M04
459bp
chromo12/Bm_scaf119
726203bp
UniRef50_Q1HDZ3 (92%/63)
Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
262 fcaL-P01_F_M05
727bp
chromo16/Bm_scaf4
9119588bp
UniRef50_A5A7A0 (98%/106)
Cluster: Mevalonate kinase; n=1; Bombyx mori|Rep: Mevalonate kinase - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0004496 F mevalonate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
263 fcaL-P01_F_M07
698bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q1LW95 (32%/75)
Cluster: Oxysterol-binding protein; n=4; Danio rerio|Rep: Oxysterol-binding protein - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
264 fcaL-P01_F_M08
364bp
chromo18/Bm_scaf2
11281751bp
UniRef50_Q00125 (37%/32)
Cluster: Uncharacterized gene 60 protein; n=1; Ictalurid herpesvirus 1|Rep: Uncharacterized gene 60 protein - Ictalurid herpesvirus 1 (IcHV-1) (Channel catfish herpesvirus)
265 fcaL-P01_F_M09
606bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q6DGH3 (48%/87)
Cluster: Zgc:92922; n=13; Euteleostomi|Rep: Zgc:92922 - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0005783 C endoplasmic reticulum
GO:0006810 P transport
GO:0015031 P protein transport
GO:0015450 F protein-transporting ATPase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0065002 P intracellular protein transmembrane transport
266 fcaL-P01_F_M10
754bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9V831 (66%/175)
Cluster: Anaphase-promoting complex subunit 10; n=16; Coelomata|Rep: Anaphase-promoting complex subunit 10 - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005680 C anaphase-promoting complex
GO:0006512 P obsolete ubiquitin cycle
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0051301 P cell division
GO:0000074 P regulation of cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000090 P mitotic anaphase
GO:0004842 F ubiquitin-protein transferase activity
GO:0006511 P ubiquitin-dependent protein catabolic process
267 fcaL-P01_F_M11
751bp
unknown/Bm_scaf1453
4011bp
UniRef50_P34834 (48%/186)
Cluster: ATP synthase a chain; n=182; Protostomia|Rep: ATP synthase a chain - Anopheles gambiae (African malaria mosquito)
GO:0005739 C mitochondrion
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0016820 F ATPase-coupled transmembrane transporter activity
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0008553 F P-type proton-exporting transporter activity
GO:0016787 F hydrolase activity
268 fcaL-P01_F_M12
721bp
unknown/Bm_scaf410
39019bp
UniRef50_Q961I4 (29%/129)
Cluster: GH21853p; n=3; Sophophora|Rep: GH21853p - Drosophila melanogaster (Fruit fly)
GO:0007286 P spermatid development
269 fcaL-P01_F_M13
640bp
chromo23/Bm_scaf22
5301712bp
UniRef50_Q9VXH4 (54%/96)
Cluster: CG9921-PA; n=4; Diptera|Rep: CG9921-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
270 fcaL-P01_F_M15
798bp
chromo25/Bm_scaf46
3255295bp
UniRef50_Q9VCI5 (50%/118)
Cluster: Putative succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial precursor; n=4; Diptera|Rep: Putative succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial precursor - Drosophila melanogaster (Fruit fly)
GO:0000104 F succinate dehydrogenase activity
GO:0005506 F iron ion binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005743 C mitochondrial inner membrane
GO:0006099 P tricarboxylic acid cycle
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0020037 F heme binding
GO:0046872 F metal ion binding
previous next from show/33462

- SilkBase 1999-2023 -