SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/33462
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
11821 fcaL-P29_pT_D05
652bp
chromo16/Bm_scaf4
9119588bp
UniRef50_P13276 (70%/186)
Cluster: Apolipophorin-3 precursor; n=11; Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0005515 F protein binding
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
11822 fcaL-P29_pT_D09
532bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P53777 (64%/92)
Cluster: Muscle LIM protein 1; n=24; Bilateria|Rep: Muscle LIM protein 1 - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007519 P skeletal muscle tissue development
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
11823 fcaL-P29_pT_D10
440bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P62266 (91%/23)
Cluster: 40S ribosomal protein S23; n=141; cellular organisms|Rep: 40S ribosomal protein S23 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006450 P regulation of translational fidelity
11824 fcaL-P29_pT_D11
651bp
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI0000DB6C7C (62%/27)
Cluster: PREDICTED: similar to mitochondrial ribosomal protein S36; n=2; Apocrita|Rep: PREDICTED: similar to mitochondrial ribosomal protein S36 - Apis mellifera
11825 fcaL-P29_pT_D12
518bp
chromo23/Bm_scaf31
4559070bp
UniRef50_Q4J6G6 (41%/39)
Cluster: Thermopsin-like protein; n=1; Sulfolobus acidocaldarius|Rep: Thermopsin-like protein - Sulfolobus acidocaldarius
11826 fcaL-P29_pT_D13
657bp
unknown/Bm_scaf4924_contig50133
986bp
UniRef50_A7T0K8 (58%/103)
Cluster: Predicted protein; n=5; Eumetazoa|Rep: Predicted protein - Nematostella vectensis
GO:0006457 P protein folding
GO:0016272 C prefoldin complex
GO:0051082 F unfolded protein binding
GO:0005515 F protein binding
11827 fcaL-P29_pT_D14
684bp
chromo6/Bm_scaf11
6993210bp
UniRef50_P06742 (60%/128)
Cluster: Myosin light chain alkali; n=35; Arthropoda|Rep: Myosin light chain alkali - Drosophila melanogaster (Fruit fly)
GO:0000146 F microfilament motor activity
GO:0003774 F cytoskeletal motor activity
GO:0005509 F calcium ion binding
GO:0005859 C muscle myosin complex
GO:0006936 P muscle contraction
GO:0007498 P mesoderm development
GO:0016459 C myosin complex
GO:0007517 P muscle organ development
GO:0008307 F structural constituent of muscle
11828 fcaL-P29_pT_D15
792bp
chromo23/Bm_scaf139
534598bp
UniRef50_UPI0000499259 (29%/140)
Cluster: hypothetical protein 388.t00006; n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical protein 388.t00006 - Entamoeba histolytica HM-1:IMSS
11829 fcaL-P29_pT_D16
707bp
chromo18/Bm_scaf2
11281751bp
UniRef50_UPI000051A3EA (55%/108)
Cluster: PREDICTED: similar to CG16771-PA isoform 1; n=2; Apis mellifera|Rep: PREDICTED: similar to CG16771-PA isoform 1 - Apis mellifera
GO:0008152 P metabolic process
11830 fcaL-P29_pT_D18
743bp
chromo12/Bm_scaf6
8265254bp
UniRef50_Q8IHW0 (36%/68)
Cluster: Myosin heavy chain subunit, putative; n=2; Plasmodium|Rep: Myosin heavy chain subunit, putative - Plasmodium falciparum (isolate 3D7)
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0005524 F ATP binding
GO:0016459 C myosin complex
11831 fcaL-P29_pT_D19
652bp
chromo20/Bm_scaf37
4206046bp
UniRef50_P33514 (73%/137)
Cluster: 40S ribosomal protein S7; n=94; Eukaryota|Rep: 40S ribosomal protein S7 - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005843 C cytosolic small ribosomal subunit
GO:0005811 C lipid droplet
11832 fcaL-P29_pT_D20
633bp
chromo4/Bm_scaf5
8683647bp
UniRef50_P27625 (34%/43)
Cluster: DNA-directed RNA polymerase III subunit RPC1; n=6; Eukaryota|Rep: DNA-directed RNA polymerase III subunit RPC1 - Plasmodium falciparum
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
11833 fcaL-P29_pT_D21
855bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9GZJ8 (80%/246)
Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bombyx mori (Silk moth)
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006302 P double-strand break repair
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0000723 P telomere maintenance
GO:0004518 F nuclease activity
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007001 P chromosome organization
GO:0007126 P meiotic cell cycle
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000019 P regulation of mitotic recombination
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0004520 F endodeoxyribonuclease activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0007004 P telomere maintenance via telomerase
GO:0007131 P reciprocal meiotic recombination
GO:0008022 F protein C-terminus binding
GO:0008408 F 3'-5' exonuclease activity
11834 fcaL-P29_pT_D22
637bp
unknown/Bm_scaf1363
4320bp
UniRef50_A4FSG8 (66%/53)
Cluster: Putative uncharacterized protein; n=1; Thermobia domestica|Rep: Putative uncharacterized protein - Thermobia domestica (firebrat)
11835 fcaL-P29_pT_E01
571bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P53777 (64%/92)
Cluster: Muscle LIM protein 1; n=24; Bilateria|Rep: Muscle LIM protein 1 - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007519 P skeletal muscle tissue development
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
11836 fcaL-P29_pT_E03
392bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q24154 (71%/59)
Cluster: 60S ribosomal protein L29; n=12; Endopterygota|Rep: 60S ribosomal protein L29 - Drosophila melanogaster (Fruit fly)
GO:0003682 F chromatin binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0007566 P embryo implantation
GO:0008201 F heparin binding
11837 fcaL-P29_pT_E04
439bp
chromo16/Bm_scaf124
657554bp
(no hit)
11838 fcaL-P29_pT_E05
709bp
chromo15/Bm_scaf42
3822572bp
UniRef50_A2AWF0 (78%/52)
Cluster: Protein phosphatase 2A regulatory subunit B; n=3; Euteleostomi|Rep: Protein phosphatase 2A regulatory subunit B - Mus musculus (Mouse)
GO:0019211 F phosphatase activator activity
GO:0000159 C protein phosphatase type 2A complex
GO:0005524 F ATP binding
GO:0005625 C obsolete soluble fraction
GO:0006470 P protein dephosphorylation
GO:0008160 F protein tyrosine phosphatase activator activity
GO:0008601 F protein phosphatase regulator activity
GO:0016887 F ATP hydrolysis activity
GO:0035307 P positive regulation of protein dephosphorylation
GO:0035308 P negative regulation of protein dephosphorylation
GO:0042803 F protein homodimerization activity
GO:0043666 P regulation of phosphoprotein phosphatase activity
GO:0046982 F protein heterodimerization activity
GO:0051721 F protein phosphatase 2A binding
11839 fcaL-P29_pT_E06
362bp
chromo7/Bm_scaf90
1464009bp
UniRef50_P67788 (64%/65)
Cluster: Adipokinetic prohormone precursor [Contains: Adipokinetic hormone (AKH)]; n=1; Manduca sexta|Rep: Adipokinetic prohormone precursor [Contains: Adipokinetic hormone (AKH)] - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0007218 P neuropeptide signaling pathway
GO:0007629 P flight behavior
11840 fcaL-P29_pT_E08
349bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q6C746 (55%/29)
Cluster: Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia lipolytica|Rep: Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica - Yarrowia lipolytica (Candida lipolytica)
11841 fcaL-P29_pT_E09
327bp
chromo11/Bm_scaf16
6248677bp
UniRef50_A4BQN8 (40%/42)
Cluster: DNA polymerase III subunit delta; n=3; Ectothiorhodospiraceae|Rep: DNA polymerase III subunit delta - Nitrococcus mobilis Nb-231
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003891 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0009360 C DNA polymerase III complex
GO:0043625 C delta DNA polymerase complex
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
11842 fcaL-P29_pT_E10
703bp
chromo18/Bm_scaf2
11281751bp
UniRef50_Q16QJ0 (70%/119)
Cluster: Apoptosis stimulating of P53; n=1; Aedes aegypti|Rep: Apoptosis stimulating of P53 - Aedes aegypti (Yellowfever mosquito)
11843 fcaL-P29_pT_E11
798bp
chromo11/Bm_scaf141
420167bp
UniRef50_UPI0000DB6CEA (50%/259)
Cluster: PREDICTED: similar to CG7319-PC, isoform C; n=1; Apis mellifera|Rep: PREDICTED: similar to CG7319-PC, isoform C - Apis mellifera
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003677 F DNA binding
GO:0005739 C mitochondrion
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0003712 F transcription coregulator activity
GO:0005759 C mitochondrial matrix
GO:0006390 P mitochondrial transcription
11844 fcaL-P29_pT_E12
726bp
unknown/Bm_scaf1363
4320bp
UniRef50_P18935 (60%/225)
Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome b - Drosophila melanogaster (Fruit fly)
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0005750 C mitochondrial respiratory chain complex III
GO:0006122 P mitochondrial electron transport, ubiquinol to cytochrome c
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0008121 F ubiquinol-cytochrome-c reductase activity
GO:0050896 P response to stimulus
11845 fcaL-P29_pT_E13
604bp
chromo28/Bm_scaf29
4724502bp
UniRef50_A6NVA6 (25%/84)
Cluster: Putative uncharacterized protein; n=1; Bacteroides capillosus ATCC 29799|Rep: Putative uncharacterized protein - Bacteroides capillosus ATCC 29799
11846 fcaL-P29_pT_E15
746bp
chromo7/Bm_scaf15
6423983bp
UniRef50_Q2F5N6 (89%/176)
Cluster: Peroxisomal biogenesis factor 3; n=1; Bombyx mori|Rep: Peroxisomal biogenesis factor 3 - Bombyx mori (Silk moth)
GO:0005779 C integral component of peroxisomal membrane
GO:0007031 P peroxisome organization
11847 fcaL-P29_pT_E16
704bp
chromo7/Bm_scaf90
1464009bp
UniRef50_Q9VNE2 (56%/162)
Cluster: Protein extra bases; n=13; Neoptera|Rep: Protein extra bases - Drosophila melanogaster (Fruit fly)
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0006446 P regulation of translational initiation
GO:0007616 P long-term memory
GO:0005737 C cytoplasm
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
11848 fcaL-P29_pT_E17
674bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q4V5I9 (61%/115)
Cluster: IP07694p; n=5; Eumetazoa|Rep: IP07694p - Drosophila melanogaster (Fruit fly)
11849 fcaL-P29_pT_E18
683bp
chromo25/Bm_scaf65
2150616bp
UniRef50_Q9VAG9 (56%/206)
Cluster: CG7789-PA; n=4; Endopterygota|Rep: CG7789-PA - Drosophila melanogaster (Fruit fly)
GO:0004437 F obsolete inositol or phosphatidylinositol phosphatase activity
GO:0000287 F magnesium ion binding
GO:0006139 P nucleobase-containing compound metabolic process
GO:0007399 P nervous system development
GO:0008441 F 3'(2'),5'-bisphosphate nucleotidase activity
GO:0016787 F hydrolase activity
GO:0031403 F lithium ion binding
GO:0046872 F metal ion binding
11850 fcaL-P29_pT_E19
750bp
chromo6/Bm_scaf122
715566bp
UniRef50_Q2I0J5 (59%/114)
Cluster: Glutathione S-transferase 3; n=3; Obtectomera|Rep: Glutathione S-transferase 3 - Bombyx mori (Silk moth)
GO:0016740 F transferase activity
GO:0004364 F glutathione transferase activity
GO:0004602 F glutathione peroxidase activity
previous next from show/33462

- SilkBase 1999-2023 -