SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/7408
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
871 S06A01NCLL0001_N20
496bp
unknown/
0bp
UniRef50_UPI0000DB7BB3 (83%/137)
Cluster: PREDICTED: similar to Eukaryotic translation initiation factor 2 subunit alpha (eIF-2-alpha); n=1; Apis mellifera|Rep: PREDICTED: similar to Eukaryotic translation initiation factor 2 subunit alpha (eIF-2-alpha) - Apis mellifera
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006417 P regulation of translation
GO:0043558 P regulation of translational initiation in response to stress
872 S06A01NCLL0001_N21
421bp
unknown/
0bp
UniRef50_P48810 (68%/29)
Cluster: Heterogeneous nuclear ribonucleoprotein 87F; n=16; Coelomata|Rep: Heterogeneous nuclear ribonucleoprotein 87F - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005703 C polytene chromosome puff
GO:0005737 C cytoplasm
GO:0030529 C ribonucleoprotein complex
GO:0035062 C omega speckle
GO:0000398 P mRNA splicing, via spliceosome
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005515 F protein binding
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0030530 C obsolete heterogeneous nuclear ribonucleoprotein complex
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
GO:0051170 P import into nucleus
873 S06A01NCLL0001_N22
489bp
unknown/
0bp
UniRef50_P08865 (69%/143)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
874 S06A01NCLL0001_N23
545bp
unknown/
0bp
UniRef50_P27635 (85%/172)
Cluster: 60S ribosomal protein L10; n=53; Fungi/Metazoa group|Rep: 60S ribosomal protein L10 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
875 S06A01NCLL0001_N24
441bp
unknown/
0bp
UniRef50_P62424 (67%/89)
Cluster: 60S ribosomal protein L7a; n=226; Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005624 C obsolete membrane fraction
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0042788 C polysomal ribosome
876 S06A01NCLL0001_O01
467bp
unknown/
0bp
UniRef50_Q9W5R8 (79%/136)
Cluster: 60S ribosomal protein L5; n=67; Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008097 F 5S rRNA binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040018 P positive regulation of multicellular organism growth
GO:0040035 P hermaphrodite genitalia development
877 S06A01NCLL0001_O02
394bp
unknown/
0bp
UniRef50_Q018R1 (33%/42)
Cluster: Haemagluttinin motif:Hep_Hag; n=2; Ostreococcus|Rep: Haemagluttinin motif:Hep_Hag - Ostreococcus tauri
878 S06A01NCLL0001_O03
461bp
unknown/
0bp
UniRef50_Q45729 (31%/47)
Cluster: Pesticidal crystal protein cry15Aa (Insecticidal delta-endotoxin CryXVA(a)); n=1; Bacillus thuringiensis serovar thompsoni|Rep: Pesticidal crystal protein cry15Aa (Insecticidal delta-endotoxin CryXVA(a)) - Bacillus thuringiensis subsp. thompsoni
GO:0009405 P obsolete pathogenesis
GO:0030435 P sporulation resulting in formation of a cellular spore
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0045449 P regulation of transcription, DNA-templated
879 S06A01NCLL0001_O04
363bp
unknown/
0bp
UniRef50_Q4KTH7 (70%/117)
Cluster: 60S acidic ribosomal protein P0; n=3; Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites domuncula (Sponge)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
880 S06A01NCLL0001_O05
507bp
unknown/
0bp
UniRef50_Q5AGB0 (48%/33)
Cluster: Potential mitochondrial chaperonin; n=4; Saccharomycetales|Rep: Potential mitochondrial chaperonin - Candida albicans (Yeast)
GO:0004672 F protein kinase activity
GO:0005381 F iron ion transmembrane transporter activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0006826 P iron ion transport
GO:0030288 C outer membrane-bounded periplasmic space
881 S06A01NCLL0001_O06
411bp
unknown/
0bp
UniRef50_Q4JSC0 (90%/134)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
882 S06A01NCLL0001_O07
380bp
unknown/
0bp
UniRef50_P27635 (88%/117)
Cluster: 60S ribosomal protein L10; n=53; Fungi/Metazoa group|Rep: 60S ribosomal protein L10 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
883 S06A01NCLL0001_O08
405bp
unknown/
0bp
UniRef50_A0DXL9 (35%/39)
Cluster: Chromosome undetermined scaffold_69, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_69, whole genome shotgun sequence - Paramecium tetraurelia
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0008360 P regulation of cell shape
884 S06A01NCLL0001_O09
458bp
unknown/
0bp
UniRef50_Q17KH3 (41%/41)
Cluster: Adenylate cyclase; n=1; Aedes aegypti|Rep: Adenylate cyclase - Aedes aegypti (Yellowfever mosquito)
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
885 S06A01NCLL0001_O10
446bp
unknown/
0bp
UniRef50_P68363 (97%/106)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0005737 C cytoplasm
GO:0000070 P mitotic sister chromatid segregation
GO:0000743 P nuclear migration involved in conjugation with cellular fusion
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005816 C spindle pole body
GO:0005827 C polar microtubule
GO:0005828 C kinetochore microtubule
GO:0005880 C nuclear microtubule
GO:0005881 C cytoplasmic microtubule
GO:0030473 P nuclear migration along microtubule
GO:0045143 P homologous chromosome segregation
886 S06A01NCLL0001_O11
460bp
unknown/
0bp
UniRef50_Q5BJ18 (75%/58)
Cluster: Zgc:113055; n=8; Eumetazoa|Rep: Zgc:113055 - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
887 S06A01NCLL0001_O12
472bp
unknown/
0bp
UniRef50_Q07020 (62%/139)
Cluster: 60S ribosomal protein L18; n=124; Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
888 S06A01NCLL0001_O13
417bp
unknown/
0bp
UniRef50_Q9W141 (81%/107)
Cluster: Putative ATP synthase f chain, mitochondrial; n=6; Endopterygota|Rep: Putative ATP synthase f chain, mitochondrial - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015992 P proton transmembrane transport
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046872 F metal ion binding
889 S06A01NCLL0001_O14
410bp
unknown/
0bp
UniRef50_Q4P7Q7 (27%/43)
Cluster: Putative uncharacterized protein; n=1; Ustilago maydis|Rep: Putative uncharacterized protein - Ustilago maydis (Smut fungus)
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0006813 P potassium ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0015137 F citrate transmembrane transporter activity
GO:0015746 P citrate transport
GO:0016021 C integral component of membrane
GO:0003887 F DNA-directed DNA polymerase activity
GO:0006260 P DNA replication
GO:0016020 C membrane
890 S06A01NCLL0001_O15
377bp
unknown/
0bp
UniRef50_Q9VP19 (36%/52)
Cluster: CG7181-PA; n=5; Sophophora|Rep: CG7181-PA - Drosophila melanogaster (Fruit fly)
GO:0004129 F cytochrome-c oxidase activity
GO:0006118 P obsolete electron transport
891 S06A01NCLL0001_O16
418bp
unknown/
0bp
UniRef50_Q8IB61 (25%/56)
Cluster: Putative uncharacterized protein MAL8P1.45; n=2; Plasmodium|Rep: Putative uncharacterized protein MAL8P1.45 - Plasmodium falciparum (isolate 3D7)
892 S06A01NCLL0001_O17
301bp
unknown/
0bp
UniRef50_P62906 (78%/71)
Cluster: 60S ribosomal protein L10a; n=212; Eukaryota|Rep: 60S ribosomal protein L10a - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0009653 P anatomical structure morphogenesis
GO:0030529 C ribonucleoprotein complex
893 S06A01NCLL0001_O18
545bp
unknown/
0bp
UniRef50_Q1E7D2 (52%/36)
Cluster: Putative uncharacterized protein; n=1; Coccidioides immitis|Rep: Putative uncharacterized protein - Coccidioides immitis
894 S06A01NCLL0001_O19
574bp
unknown/
0bp
UniRef50_Q71DI3 (96%/136)
Cluster: Histone H3.2; n=3155; Eukaryota|Rep: Histone H3.2 - Homo sapiens (Human)
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006334 P nucleosome assembly
GO:0007001 P chromosome organization
GO:0000788 C nucleosome
GO:0006281 P DNA repair
GO:0006333 P chromatin assembly or disassembly
GO:0006974 P cellular response to DNA damage stimulus
895 S06A01NCLL0001_O20
540bp
unknown/
0bp
UniRef50_P05388 (72%/129)
Cluster: 60S acidic ribosomal protein P0; n=171; Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
896 S06A01NCLL0001_O21
438bp
unknown/
0bp
UniRef50_Q7TYQ8 (35%/54)
Cluster: PEPTIDE SYNTHETASE MBTF; n=16; Mycobacterium|Rep: PEPTIDE SYNTHETASE MBTF - Mycobacterium bovis
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0048037 F obsolete cofactor binding
GO:0005351 F carbohydrate:proton symporter activity
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0008982 F protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GO:0009401 P phosphoenolpyruvate-dependent sugar phosphotransferase system
GO:0016740 F transferase activity
897 S06A01NCLL0001_O22
569bp
unknown/
0bp
UniRef50_A5KBZ8 (32%/49)
Cluster: Putative uncharacterized protein; n=7; Plasmodium|Rep: Putative uncharacterized protein - Plasmodium vivax
898 S06A01NCLL0001_O23
540bp
unknown/
0bp
UniRef50_Q9TWZ1 (62%/161)
Cluster: Protein disulphide isomerase isoform/multifunctional endoplasmic reticulum luminal polypeptide; n=8; Endopterygota|Rep: Protein disulphide isomerase isoform/multifunctional endoplasmic reticulum luminal polypeptide - Drosophila melanogaster (Fruit fly)
GO:0005783 C endoplasmic reticulum
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
GO:0003756 F protein disulfide isomerase activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004629 F phospholipase C activity
GO:0005515 F protein binding
GO:0006606 P protein import into nucleus
GO:0006621 P protein retention in ER lumen
GO:0007165 P signal transduction
GO:0043065 P positive regulation of apoptotic process
899 S06A01NCLL0001_O24
549bp
unknown/
0bp
UniRef50_Q9U505 (73%/114)
Cluster: ATP synthase lipid-binding protein, mitochondrial precursor; n=143; Eukaryota|Rep: ATP synthase lipid-binding protein, mitochondrial precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005739 C mitochondrion
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008289 F lipid binding
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005624 C obsolete membrane fraction
GO:0005753 C mitochondrial proton-transporting ATP synthase complex
GO:0006091 P generation of precursor metabolites and energy
GO:0005743 C mitochondrial inner membrane
900 S06A01NCLL0001_P01
221bp
unknown/
0bp
(no hit)
previous next from show/7408

- SilkBase 1999-2023 -