SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Samia ricini Search

previous next from show/7408
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
7081 S06A01NCLL0023_P11
308bp
unknown/
0bp
(no hit)
7082 S06A01NCLL0023_P13
349bp
unknown/
0bp
UniRef50_UPI00015B5551 (66%/87)
Cluster: PREDICTED: similar to GA17110-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to GA17110-PA - Nasonia vitripennis
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0008270 F zinc ion binding
7083 S06A01NCLL0023_P14
244bp
unknown/
0bp
UniRef50_Q95S87 (62%/70)
Cluster: GM05817p; n=6; Endopterygota|Rep: GM05817p - Drosophila melanogaster (Fruit fly)
7084 S06A01NCLL0023_P15
338bp
unknown/
0bp
UniRef50_Q550J2 (40%/35)
Cluster: Putative uncharacterized protein; n=4; Dictyostelium discoideum|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4
GO:0005515 F protein binding
GO:0005618 C cell wall
GO:0009986 C cell surface
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0009276 C Gram-negative-bacterium-type cell wall
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
7085 S06A01NCLL0023_P16
385bp
unknown/
0bp
UniRef50_P36241 (78%/120)
Cluster: 60S ribosomal protein L19; n=141; Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
7086 S06A01NCLL0023_P17
181bp
unknown/
0bp
UniRef50_UPI0000DB7AD8 (41%/31)
Cluster: PREDICTED: similar to vegetable CG6657-PA, isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to vegetable CG6657-PA, isoform A - Apis mellifera
GO:0003723 F RNA binding
GO:0005488 F binding
7087 S06A01NCLL0023_P18
392bp
unknown/
0bp
UniRef50_Q7QB27 (33%/53)
Cluster: ENSANGP00000012914; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000012914 - Anopheles gambiae str. PEST
7088 S06A01NCLL0023_P19
192bp
unknown/
0bp
UniRef50_Q4SEQ2 (98%/63)
Cluster: Chromosome 3 SCAF14614, whole genome shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 3 SCAF14614, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0005739 C mitochondrion
7089 S06A01NCLL0023_P20
457bp
unknown/
0bp
UniRef50_Q59EQ2 (81%/103)
Cluster: Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide variant; n=4; Eutheria|Rep: Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide variant - Homo sapiens (Human)
GO:0004497 F monooxygenase activity
GO:0019904 F protein domain specific binding
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0001654 P eye development
GO:0001709 P cell fate determination
GO:0001742 P oenocyte differentiation
GO:0001745 P compound eye morphogenesis
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001752 P compound eye photoreceptor fate commitment
GO:0002009 P morphogenesis of an epithelium
GO:0004713 F protein tyrosine kinase activity
GO:0004872 F signaling receptor activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005006 F epidermal growth factor-activated receptor activity
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006916 P negative regulation of apoptotic process
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007298 P border follicle cell migration
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007314 P oocyte anterior/posterior axis specification
GO:0007346 P regulation of mitotic cell cycle
GO:0007350 P blastoderm segmentation
GO:0007367 P segment polarity determination
GO:0007369 P gastrulation
GO:0007390 P germ-band shortening
GO:0007391 P dorsal closure
GO:0007420 P brain development
GO:0007421 P stomatogastric nervous system development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007443 P Malpighian tubule morphogenesis
GO:0007444 P imaginal disc development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007469 P antennal development
GO:0007472 P wing disc morphogenesis
GO:0007473 P wing disc proximal/distal pattern formation
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007477 P notum development
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007482 P haltere development
GO:0008071 P maternal determination of dorsal/ventral axis, ovarian follicular epithelium, soma encoded
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0009880 P embryonic pattern specification
GO:0009952 P anterior/posterior pattern specification
GO:0009953 P dorsal/ventral pattern formation
GO:0016020 C membrane
GO:0016203 P muscle attachment
GO:0016301 F kinase activity
GO:0016318 P ommatidial rotation
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0016333 P morphogenesis of follicular epithelium
GO:0016337 P cell-cell adhesion
GO:0030031 P cell projection assembly
GO:0030381 P chorion-containing eggshell pattern formation
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035160 P maintenance of epithelial integrity, open tracheal system
GO:0035202 P tracheal pit formation in open tracheal system
GO:0035225 P determination of genital disc primordium
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035309 P wing and notum subfield formation
GO:0035310 P notum cell fate specification
GO:0042676 P compound eye cone cell fate commitment
GO:0042694 P muscle cell fate specification
GO:0043066 P negative regulation of apoptotic process
GO:0045466 P R7 cell differentiation
GO:0045468 P regulation of R8 cell spacing in compound eye
GO:0045610 P regulation of hemocyte differentiation
GO:0046673 P negative regulation of compound eye retinal cell programmed cell death
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0048139 P female germ-line cyst encapsulation
GO:0048140 P male germ-line cyst encapsulation
GO:0048749 P compound eye development
GO:0005080 F protein kinase C binding
GO:0005159 F insulin-like growth factor receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0006605 P protein targeting
GO:0008426 F protein kinase C inhibitor activity
GO:0009966 P regulation of signal transduction
GO:0045664 P regulation of neuron differentiation
GO:0048167 P regulation of synaptic plasticity
GO:0007242 P intracellular signal transduction
GO:0019899 F enzyme binding
7090 S06A01NCLL0023_P21
36bp
unknown/
0bp
(no hit)
7091 S06A01NCLL0023_P22
283bp
unknown/
0bp
UniRef50_P62701 (64%/51)
Cluster: 40S ribosomal protein S4, X isoform; n=137; Eukaryota|Rep: 40S ribosomal protein S4, X isoform - Homo sapiens (Human)
GO:0000074 P regulation of cell cycle
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005737 C cytoplasm
7092 S06A01NCLL0023_P23
376bp
unknown/
0bp
UniRef50_P52813 (80%/121)
Cluster: 40S ribosomal protein S3a; n=17; Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005843 C cytosolic small ribosomal subunit
GO:0006413 P translational initiation
GO:0006917 P apoptotic process
7093 S06A01NCLL0023_P24
262bp
unknown/
0bp
UniRef50_UPI0000D578C8 (91%/83)
Cluster: PREDICTED: similar to poly A binding protein, cytoplasmic 1 isoform 2; n=2; Coelomata|Rep: PREDICTED: similar to poly A binding protein, cytoplasmic 1 isoform 2 - Tribolium castaneum
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006401 P RNA catabolic process
GO:0006412 P translation
GO:0007596 P blood coagulation
GO:0008143 F poly(A) binding
GO:0008266 F poly(U) RNA binding
GO:0017130 F poly(C) RNA binding
7094 S06A01NCLL0024_A01
240bp
unknown/
0bp
UniRef50_P33514 (65%/70)
Cluster: 40S ribosomal protein S7; n=94; Eukaryota|Rep: 40S ribosomal protein S7 - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005811 C lipid droplet
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005843 C cytosolic small ribosomal subunit
7095 S06A01NCLL0024_A02
216bp
unknown/
0bp
UniRef50_UPI00006CB167 (40%/44)
Cluster: hypothetical protein TTHERM_00298480; n=1; Tetrahymena thermophila SB210|Rep: hypothetical protein TTHERM_00298480 - Tetrahymena thermophila SB210
GO:0016301 F kinase activity
GO:0005198 F structural molecule activity
GO:0005882 C intermediate filament
7096 S06A01NCLL0024_A03
102bp
unknown/
0bp
UniRef50_P62910 (93%/32)
Cluster: 60S ribosomal protein L32; n=83; Eukaryota|Rep: 60S ribosomal protein L32 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
7097 S06A01NCLL0024_A04
215bp
unknown/
0bp
UniRef50_A0DV16 (36%/44)
Cluster: Chromosome undetermined scaffold_65, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_65, whole genome shotgun sequence - Paramecium tetraurelia
7098 S06A01NCLL0024_A05
227bp
unknown/
0bp
UniRef50_P62266 (84%/38)
Cluster: 40S ribosomal protein S23; n=141; cellular organisms|Rep: 40S ribosomal protein S23 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006450 P regulation of translational fidelity
GO:0019843 F rRNA binding
7099 S06A01NCLL0024_A07
264bp
unknown/
0bp
UniRef50_P62249 (74%/74)
Cluster: 40S ribosomal protein S16; n=64; Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005737 C cytoplasm
7100 S06A01NCLL0024_A09
166bp
unknown/
0bp
UniRef50_Q8FTS1 (78%/14)
Cluster: TnpC protein; n=1; Corynebacterium efficiens|Rep: TnpC protein - Corynebacterium efficiens
GO:0003824 F catalytic activity
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0048037 F obsolete cofactor binding
GO:0005529 F carbohydrate binding
GO:0005975 P carbohydrate metabolic process
7101 S06A01NCLL0024_A10
179bp
unknown/
0bp
UniRef50_UPI00015B4BCD (52%/38)
Cluster: PREDICTED: similar to conserved hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to conserved hypothetical protein - Nasonia vitripennis
GO:0003723 F RNA binding
GO:0005488 F binding
7102 S06A01NCLL0024_A11
281bp
unknown/
0bp
UniRef50_Q1HDZ3 (96%/64)
Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
7103 S06A01NCLL0024_A12
184bp
unknown/
0bp
UniRef50_Q59EQ2 (78%/32)
Cluster: Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide variant; n=4; Eutheria|Rep: Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide variant - Homo sapiens (Human)
GO:0004497 F monooxygenase activity
GO:0019904 F protein domain specific binding
GO:0005737 C cytoplasm
GO:0005080 F protein kinase C binding
GO:0005159 F insulin-like growth factor receptor binding
GO:0005515 F protein binding
GO:0006469 P negative regulation of protein kinase activity
GO:0006605 P protein targeting
GO:0008426 F protein kinase C inhibitor activity
GO:0009966 P regulation of signal transduction
GO:0045664 P regulation of neuron differentiation
GO:0048167 P regulation of synaptic plasticity
GO:0006886 P intracellular protein transport
GO:0050774 P negative regulation of dendrite morphogenesis
7104 S06A01NCLL0024_A13
117bp
unknown/
0bp
(no hit)
7105 S06A01NCLL0024_A14
155bp
unknown/
0bp
UniRef50_UPI00005A581E (84%/32)
Cluster: PREDICTED: similar to tubulin, beta 3; n=2; Canis lupus familiaris|Rep: PREDICTED: similar to tubulin, beta 3 - Canis familiaris
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0000212 P meiotic spindle organization
GO:0002119 P nematode larval development
GO:0005737 C cytoplasm
GO:0007051 P spindle organization
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
7106 S06A01NCLL0024_A15
203bp
unknown/
0bp
UniRef50_Q9UBR1 (69%/63)
Cluster: Beta-ureidopropionase; n=42; root|Rep: Beta-ureidopropionase - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0003837 F beta-ureidopropionase activity
GO:0005737 C cytoplasm
GO:0006807 P nitrogen compound metabolic process
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0046872 F metal ion binding
7107 S06A01NCLL0024_A16
113bp
unknown/
0bp
(no hit)
7108 S06A01NCLL0024_A18
146bp
unknown/
0bp
(no hit)
7109 S06A01NCLL0024_A19
215bp
unknown/
0bp
(no hit)
7110 S06A01NCLL0024_A20
166bp
unknown/
0bp
UniRef50_Q0U551 (43%/39)
Cluster: Predicted protein; n=1; Phaeosphaeria nodorum|Rep: Predicted protein - Phaeosphaeria nodorum (Septoria nodorum)
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
previous next from show/7408

- SilkBase 1999-2023 -