SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Samia ricini Search

previous next from show/7408
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
601 S06A01NCLL0001_C11
489bp
unknown/
0bp
UniRef50_P08865 (73%/153)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
602 S06A01NCLL0001_C12
84bp
unknown/
0bp
(no hit)
603 S06A01NCLL0001_C13
408bp
unknown/
0bp
UniRef50_Q1J4U2 (30%/52)
Cluster: Putative surface protein; n=1; Streptococcus pyogenes MGAS10750|Rep: Putative surface protein - Streptococcus pyogenes serotype M4 (strain MGAS10750)
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
604 S06A01NCLL0001_C14
181bp
unknown/
0bp
UniRef50_Q67RR4 (55%/29)
Cluster: Sigma-54-dependent transcriptional regulator; n=1; Symbiobacterium thermophilum|Rep: Sigma-54-dependent transcriptional regulator - Symbiobacterium thermophilum
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0008134 F transcription factor binding
GO:0017111 F nucleoside-triphosphatase activity
605 S06A01NCLL0001_C15
339bp
unknown/
0bp
UniRef50_Q16XX4 (47%/84)
Cluster: DEAD box ATP-dependent RNA helicase; n=5; Neoptera|Rep: DEAD box ATP-dependent RNA helicase - Aedes aegypti (Yellowfever mosquito)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0016246 P RNA interference
GO:0019730 P antimicrobial humoral response
GO:0031047 P gene silencing by RNA
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0042254 P ribosome biogenesis
606 S06A01NCLL0001_C16
448bp
unknown/
0bp
UniRef50_UPI0000E4A4EC (47%/138)
Cluster: PREDICTED: similar to gag-pol polyprotein; n=6; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to gag-pol polyprotein - Strongylocentrotus purpuratus
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
607 S06A01NCLL0001_C17
487bp
unknown/
0bp
UniRef50_P08570 (61%/112)
Cluster: 60S acidic ribosomal protein P1; n=15; Eukaryota|Rep: 60S acidic ribosomal protein P1 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
608 S06A01NCLL0001_C18
416bp
unknown/
0bp
UniRef50_P17704 (73%/72)
Cluster: 40S ribosomal protein S17; n=63; Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005843 C cytosolic small ribosomal subunit
609 S06A01NCLL0001_C19
348bp
unknown/
0bp
UniRef50_P26373 (60%/105)
Cluster: 60S ribosomal protein L13; n=111; Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005830 C cytosolic ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
610 S06A01NCLL0001_C20
452bp
unknown/
0bp
UniRef50_P27635 (87%/140)
Cluster: 60S ribosomal protein L10; n=53; Fungi/Metazoa group|Rep: 60S ribosomal protein L10 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
GO:0007283 P spermatogenesis
611 S06A01NCLL0001_C21
417bp
unknown/
0bp
UniRef50_Q9Y2S7 (55%/109)
Cluster: Polymerase delta-interacting protein 2; n=30; Euteleostomi|Rep: Polymerase delta-interacting protein 2 - Homo sapiens (Human)
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0008340 P determination of adult lifespan
612 S06A01NCLL0001_C22
378bp
unknown/
0bp
UniRef50_Q4GXT1 (71%/108)
Cluster: Ribosomal protein S10e; n=3; Fungi/Metazoa group|Rep: Ribosomal protein S10e - Agriotes lineatus (Lined click beetle)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005737 C cytoplasm
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
613 S06A01NCLL0001_C23
513bp
unknown/
0bp
UniRef50_Q2F639 (66%/71)
Cluster: WD repeat domain 61; n=1; Bombyx mori|Rep: WD repeat domain 61 - Bombyx mori (Silk moth)
GO:0005515 F protein binding
614 S06A01NCLL0001_C24
444bp
unknown/
0bp
UniRef50_Q17P48 (61%/73)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0005515 F protein binding
615 S06A01NCLL0001_D01
541bp
unknown/
0bp
UniRef50_P62263 (70%/137)
Cluster: 40S ribosomal protein S14; n=231; cellular organisms|Rep: 40S ribosomal protein S14 - Homo sapiens (Human)
GO:0000028 P ribosomal small subunit assembly
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030490 P maturation of SSU-rRNA
GO:0030529 C ribonucleoprotein complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0019843 F rRNA binding
616 S06A01NCLL0001_D02
404bp
unknown/
0bp
UniRef50_Q84SX1 (41%/34)
Cluster: Putative uncharacterized protein OSJNBa0092M19.9; n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein OSJNBa0092M19.9 - Oryza sativa subsp. japonica (Rice)
GO:0005524 F ATP binding
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016874 F ligase activity
GO:0030272 F 5-formyltetrahydrofolate cyclo-ligase activity
GO:0006464 P cellular protein modification process
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0009653 P anatomical structure morphogenesis
GO:0030878 P thyroid gland development
GO:0043565 F sequence-specific DNA binding
GO:0045449 P regulation of transcription, DNA-templated
617 S06A01NCLL0001_D03
451bp
unknown/
0bp
UniRef50_P21187 (86%/140)
Cluster: Polyadenylate-binding protein (Poly(A)-binding protein); n=6; Bilateria|Rep: Polyadenylate-binding protein (Poly(A)-binding protein) - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0007268 P chemical synaptic transmission
GO:0008143 F poly(A) binding
GO:0045727 P positive regulation of translation
618 S06A01NCLL0001_D04
470bp
unknown/
0bp
UniRef50_Q9TWZ1 (70%/131)
Cluster: Protein disulphide isomerase isoform/multifunctional endoplasmic reticulum luminal polypeptide; n=8; Endopterygota|Rep: Protein disulphide isomerase isoform/multifunctional endoplasmic reticulum luminal polypeptide - Drosophila melanogaster (Fruit fly)
GO:0005783 C endoplasmic reticulum
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
GO:0003756 F protein disulfide isomerase activity
619 S06A01NCLL0001_D05
520bp
unknown/
0bp
UniRef50_UPI0000D56066 (35%/67)
Cluster: PREDICTED: similar to CG5687-PA; n=2; Endopterygota|Rep: PREDICTED: similar to CG5687-PA - Tribolium castaneum
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0015662 F P-type ion transporter activity
GO:0016020 C membrane
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006512 P obsolete ubiquitin cycle
620 S06A01NCLL0001_D06
412bp
unknown/
0bp
UniRef50_Q4SKI1 (81%/60)
Cluster: Chromosome 13 SCAF14566, whole genome shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 13 SCAF14566, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0008168 F methyltransferase activity
GO:0008469 F histone-arginine N-methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018216 P peptidyl-arginine methylation
GO:0019919 P peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0035241 F protein-arginine omega-N monomethyltransferase activity
GO:0042803 F protein homodimerization activity
GO:0043393 P regulation of protein binding
GO:0046982 F protein heterodimerization activity
GO:0001701 P in utero embryonic development
GO:0008276 F protein methyltransferase activity
GO:0030529 C ribonucleoprotein complex
621 S06A01NCLL0001_D07
361bp
unknown/
0bp
UniRef50_Q9DC49 (81%/70)
Cluster: Adult male lung cDNA, RIKEN full-length enriched library, clone:1200003H09 product:ribosomal protein S2, full insert sequence; n=13; Eutheria|Rep: Adult male lung cDNA, RIKEN full-length enriched library, clone:1200003H09 product:ribosomal protein S2, full insert sequence - Mus musculus (Mouse)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0005843 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0005829 C cytosol
622 S06A01NCLL0001_D08
334bp
unknown/
0bp
UniRef50_UPI00015B4B4C (54%/61)
Cluster: PREDICTED: similar to MGC53320 protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to MGC53320 protein - Nasonia vitripennis
623 S06A01NCLL0001_D09
410bp
unknown/
0bp
UniRef50_Q152R4 (52%/87)
Cluster: SCP-related protein; n=1; Bombyx mori|Rep: SCP-related protein - Bombyx mori (Silk moth)
GO:0005576 C extracellular region
624 S06A01NCLL0001_D10
429bp
unknown/
0bp
UniRef50_P55735 (71%/132)
Cluster: Protein SEC13 homolog; n=84; Eukaryota|Rep: Protein SEC13 homolog - Homo sapiens (Human)
GO:0003674 F molecular_function
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0008363 P larval chitin-based cuticle development
GO:0035293 P chitin-based larval cuticle pattern formation
625 S06A01NCLL0001_D11
337bp
unknown/
0bp
UniRef50_UPI0000E47F16 (76%/89)
Cluster: PREDICTED: similar to ribosomal protein L37a; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to ribosomal protein L37a - Strongylocentrotus purpuratus
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0030529 C ribonucleoprotein complex
GO:0046872 F metal ion binding
626 S06A01NCLL0001_D12
461bp
unknown/
0bp
UniRef50_P04350 (83%/142)
Cluster: Tubulin beta-4 chain; n=4602; root|Rep: Tubulin beta-4 chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0000212 P meiotic spindle organization
GO:0002119 P nematode larval development
GO:0005737 C cytoplasm
GO:0007051 P spindle organization
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
627 S06A01NCLL0001_D13
409bp
unknown/
0bp
UniRef50_Q1HDZ3 (95%/90)
Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 - Bombyx mori (Silk moth)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
628 S06A01NCLL0001_D14
157bp
unknown/
0bp
UniRef50_UPI00006126C6 (88%/18)
Cluster: PREDICTED: hypothetical protein; n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein - Gallus gallus
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
629 S06A01NCLL0001_D15
184bp
unknown/
0bp
(no hit)
630 S06A01NCLL0001_D16
526bp
unknown/
0bp
UniRef50_P62424 (58%/112)
Cluster: 60S ribosomal protein L7a; n=226; Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005624 C obsolete membrane fraction
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0042788 C polysomal ribosome
previous next from show/7408

- SilkBase 1999-2023 -