SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Samia ricini Search

previous next from show/7408
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
4801 S06A01NCLL0012_I08
534bp
unknown/
0bp
UniRef50_Q6NY78 (87%/32)
Cluster: Eukaryotic translation initiation factor 2, subunit 2 beta; n=4; Bilateria|Rep: Eukaryotic translation initiation factor 2, subunit 2 beta - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0003743 F translation initiation factor activity
GO:0006413 P translational initiation
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005840 C ribosome
GO:0005850 C eukaryotic translation initiation factor 2 complex
GO:0006412 P translation
GO:0008135 F translation factor activity, RNA binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006355 P regulation of transcription, DNA-templated
4802 S06A01NCLL0012_I09
435bp
unknown/
0bp
UniRef50_Q25490 (40%/129)
Cluster: Apolipophorins precursor [Contains: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5; Ditrysia|Rep: Apolipophorins precursor [Contains: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005319 F lipid transporter activity
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
GO:0016020 C membrane
4803 S06A01NCLL0012_I10
515bp
unknown/
0bp
UniRef50_P39019 (63%/135)
Cluster: 40S ribosomal protein S19; n=127; Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0009991 P response to extracellular stimulus
GO:0015669 P gas transport
GO:0030218 P erythrocyte differentiation
GO:0030529 C ribonucleoprotein complex
GO:0048856 P anatomical structure development
GO:0051272 P positive regulation of cellular component movement
GO:0005634 C nucleus
GO:0005829 C cytosol
4804 S06A01NCLL0012_I12
477bp
unknown/
0bp
UniRef50_Q4RVA0 (40%/42)
Cluster: Chromosome 15 SCAF14992, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 15 SCAF14992, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
4805 S06A01NCLL0012_I14
562bp
unknown/
0bp
UniRef50_Q8T8R1 (54%/159)
Cluster: GM14667p; n=8; Neoptera|Rep: GM14667p - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
4806 S06A01NCLL0012_I15
522bp
unknown/
0bp
UniRef50_Q17DJ8 (72%/170)
Cluster: Acyl-coa dehydrogenase; n=4; Endopterygota|Rep: Acyl-coa dehydrogenase - Aedes aegypti (Yellowfever mosquito)
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0006118 P obsolete electron transport
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0004085 F butyryl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
4807 S06A01NCLL0012_I16
535bp
unknown/
0bp
UniRef50_UPI0000D566B5 (55%/77)
Cluster: PREDICTED: similar to CG31605-PG, isoform G; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG31605-PG, isoform G - Tribolium castaneum
GO:0007286 P spermatid development
4808 S06A01NCLL0012_I17
85bp
unknown/
0bp
(no hit)
4809 S06A01NCLL0012_I18
581bp
unknown/
0bp
UniRef50_P04540 (26%/88)
Cluster: NADH-ubiquinone oxidoreductase chain 5; n=4; Trypanosomatidae|Rep: NADH-ubiquinone oxidoreductase chain 5 - Trypanosoma brucei brucei
GO:0005739 C mitochondrion
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0042773 P ATP synthesis coupled electron transport
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045449 P regulation of transcription, DNA-templated
GO:0004221 F obsolete ubiquitin thiolesterase activity
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016787 F hydrolase activity
4810 S06A01NCLL0012_I19
509bp
unknown/
0bp
UniRef50_Q14562 (88%/166)
Cluster: ATP-dependent RNA helicase DHX8; n=90; Eukaryota|Rep: ATP-dependent RNA helicase DHX8 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
4811 S06A01NCLL0012_I20
479bp
unknown/
0bp
UniRef50_A0CYB6 (31%/64)
Cluster: Chromosome undetermined scaffold_31, whole genome shotgun sequence; n=5; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_31, whole genome shotgun sequence - Paramecium tetraurelia
4812 S06A01NCLL0012_I21
244bp
unknown/
0bp
UniRef50_UPI000155DA13 (45%/48)
Cluster: PREDICTED: similar to hCG19725; n=1; Equus caballus|Rep: PREDICTED: similar to hCG19725 - Equus caballus
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006334 P nucleosome assembly
4813 S06A01NCLL0012_I22
631bp
unknown/
0bp
UniRef50_Q14566 (69%/209)
Cluster: DNA replication licensing factor MCM6; n=51; Eumetazoa|Rep: DNA replication licensing factor MCM6 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006270 P DNA replication initiation
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0042802 F identical protein binding
GO:0000084 P mitotic S phase
GO:0003688 F DNA replication origin binding
GO:0005656 C nuclear pre-replicative complex
GO:0005737 C cytoplasm
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0009378 F four-way junction helicase activity
GO:0031261 C DNA replication preinitiation complex
GO:0042555 C MCM complex
GO:0043140 F 3'-5' DNA helicase activity
4814 S06A01NCLL0012_I23
552bp
unknown/
0bp
UniRef50_A4SVC5 (37%/24)
Cluster: Monofunctional biosynthetic peptidoglycan transglycosylase precursor; n=1; Polynucleobacter sp. QLW-P1DMWA-1|Rep: Monofunctional biosynthetic peptidoglycan transglycosylase precursor - Polynucleobacter sp. QLW-P1DMWA-1
GO:0003824 F catalytic activity
GO:0007047 P cell wall organization
GO:0008360 P regulation of cell shape
GO:0009252 P peptidoglycan biosynthetic process
GO:0009274 C peptidoglycan-based cell wall
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016763 F pentosyltransferase activity
4815 S06A01NCLL0012_I24
659bp
unknown/
0bp
UniRef50_Q14204 (64%/213)
Cluster: Dynein heavy chain, cytosolic; n=51; Eumetazoa|Rep: Dynein heavy chain, cytosolic - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0016887 F ATP hydrolysis activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0030286 C dynein complex
GO:0042623 F ATP hydrolysis activity
GO:0005813 C centrosome
GO:0005938 C cell cortex
GO:0030139 C endocytic vesicle
GO:0000910 P cytokinesis
GO:0005635 C nuclear envelope
GO:0005819 C spindle
GO:0007051 P spindle organization
GO:0009792 P embryo development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
GO:0051932 P synaptic transmission, GABAergic
4816 S06A01NCLL0012_J01
433bp
unknown/
0bp
UniRef50_O82966 (30%/72)
Cluster: ORF C6; n=2; root|Rep: ORF C6 - Ralstonia solanacearum (Pseudomonas solanacearum)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0015074 P DNA integration
GO:0005737 C cytoplasm
4817 S06A01NCLL0012_J02
39bp
unknown/
0bp
(no hit)
4818 S06A01NCLL0012_J03
569bp
unknown/
0bp
UniRef50_P62424 (61%/130)
Cluster: 60S ribosomal protein L7a; n=226; Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005624 C obsolete membrane fraction
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0042788 C polysomal ribosome
4819 S06A01NCLL0012_J04
210bp
unknown/
0bp
UniRef50_Q64VM9 (61%/18)
Cluster: Capsular polysaccharide biosynthesis protein CapD; n=7; Bacteroidales|Rep: Capsular polysaccharide biosynthesis protein CapD - Bacteroides fragilis
GO:0009058 P biosynthetic process
4820 S06A01NCLL0012_J05
546bp
unknown/
0bp
UniRef50_P52813 (78%/160)
Cluster: 40S ribosomal protein S3a; n=17; Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005843 C cytosolic small ribosomal subunit
GO:0006413 P translational initiation
GO:0006917 P apoptotic process
4821 S06A01NCLL0012_J06
563bp
unknown/
0bp
UniRef50_P13276 (66%/152)
Cluster: Apolipophorin-3 precursor; n=11; Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0004871 F obsolete signal transducer activity
GO:0006935 P chemotaxis
GO:0007165 P signal transduction
GO:0016020 C membrane
4822 S06A01NCLL0012_J07
439bp
unknown/
0bp
UniRef50_P62249 (82%/95)
Cluster: 40S ribosomal protein S16; n=64; Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005737 C cytoplasm
4823 S06A01NCLL0012_J08
432bp
unknown/
0bp
UniRef50_A1IRV2 (33%/42)
Cluster: Putative uncharacterized protein; n=2; Neisseria meningitidis|Rep: Putative uncharacterized protein - Neisseria meningitidis serogroup A
GO:0006805 P xenobiotic metabolic process
GO:0006955 P immune response
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
GO:0050832 P defense response to fungus
GO:0000155 F phosphorelay sensor kinase activity
GO:0000160 P phosphorelay signal transduction system
GO:0004673 F protein histidine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
4824 S06A01NCLL0012_J09
499bp
unknown/
0bp
UniRef50_UPI00015B5261 (34%/91)
Cluster: PREDICTED: similar to ENSANGP00000012173; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000012173 - Nasonia vitripennis
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
4825 S06A01NCLL0012_J10
368bp
unknown/
0bp
UniRef50_UPI0000D55DC5 (52%/38)
Cluster: PREDICTED: similar to CG1804-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG1804-PA - Tribolium castaneum
GO:0005515 F protein binding
4826 S06A01NCLL0012_J11
435bp
unknown/
0bp
UniRef50_P39019 (65%/110)
Cluster: 40S ribosomal protein S19; n=127; Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0009991 P response to extracellular stimulus
GO:0015669 P gas transport
GO:0030218 P erythrocyte differentiation
GO:0030529 C ribonucleoprotein complex
GO:0048856 P anatomical structure development
GO:0051272 P positive regulation of cellular component movement
GO:0005634 C nucleus
GO:0005829 C cytosol
4827 S06A01NCLL0012_J12
537bp
unknown/
0bp
UniRef50_UPI0000D56DAF (31%/133)
Cluster: PREDICTED: similar to CG9335-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG9335-PA - Tribolium castaneum
4828 S06A01NCLL0012_J13
514bp
unknown/
0bp
UniRef50_Q8MR08 (39%/87)
Cluster: LD46156p; n=30; Arthropoda|Rep: LD46156p - Drosophila melanogaster (Fruit fly)
4829 S06A01NCLL0012_J14
489bp
unknown/
0bp
UniRef50_P19109 (57%/83)
Cluster: ATP-dependent RNA helicase p62; n=9; Eukaryota|Rep: ATP-dependent RNA helicase p62 - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0008026 F helicase activity
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0019730 P antimicrobial humoral response
GO:0031047 P gene silencing by RNA
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0042254 P ribosome biogenesis
4830 S06A01NCLL0012_J15
659bp
unknown/
0bp
UniRef50_P62753 (82%/150)
Cluster: 40S ribosomal protein S6; n=203; Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0042593 P glucose homeostasis
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0006334 P nucleosome assembly
previous next from show/7408

- SilkBase 1999-2023 -