SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/7408
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
3151 S06A01NCLL0008_A08
503bp
unknown/
0bp
UniRef50_A7PMY6 (34%/41)
Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape)
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0004194 F obsolete pepsin A activity
GO:0005515 F protein binding
GO:0006461 P protein-containing complex assembly
GO:0006508 P proteolysis
GO:0006886 P intracellular protein transport
GO:0008233 F peptidase activity
GO:0008565 F obsolete protein transporter activity
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0030117 C membrane coat
GO:0008909 F isochorismate synthase activity
GO:0009058 P biosynthetic process
GO:0009507 C chloroplast
3152 S06A01NCLL0008_A09
314bp
unknown/
0bp
UniRef50_Q54W22 (30%/60)
Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4
GO:0003677 F DNA binding
GO:0006304 P DNA modification
3153 S06A01NCLL0008_A10
492bp
unknown/
0bp
UniRef50_Q71DI3 (94%/125)
Cluster: Histone H3.2; n=3155; Eukaryota|Rep: Histone H3.2 - Homo sapiens (Human)
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006334 P nucleosome assembly
GO:0007001 P chromosome organization
GO:0000788 C nucleosome
GO:0006281 P DNA repair
GO:0006333 P chromatin assembly or disassembly
GO:0006974 P cellular response to DNA damage stimulus
3154 S06A01NCLL0008_A11
430bp
unknown/
0bp
UniRef50_Q91TN1 (47%/85)
Cluster: T61; n=1; Tupaiid herpesvirus 1|Rep: T61 - Tupaiid herpesvirus 1 (strain 1) (TuHV-1) (Herpesvirus tupaia (strain1))
3155 S06A01NCLL0008_A12
443bp
unknown/
0bp
UniRef50_UPI0000E4898C (30%/65)
Cluster: PREDICTED: similar to fibropellin Ia; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to fibropellin Ia - Strongylocentrotus purpuratus
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
3156 S06A01NCLL0008_A13
403bp
unknown/
0bp
UniRef50_UPI0000D55A11 (37%/74)
Cluster: PREDICTED: similar to Protein KIAA1404; n=1; Tribolium castaneum|Rep: PREDICTED: similar to Protein KIAA1404 - Tribolium castaneum
GO:0000166 F nucleotide binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004828 F serine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006412 P translation
GO:0006434 P seryl-tRNA aminoacylation
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3157 S06A01NCLL0008_A14
550bp
unknown/
0bp
UniRef50_UPI0000E24A04 (79%/140)
Cluster: PREDICTED: similar to mSUG1 protein isoform 5; n=1; Pan troglodytes|Rep: PREDICTED: similar to mSUG1 protein isoform 5 - Pan troglodytes
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006366 P transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0030163 P protein catabolic process
GO:0031531 F thyrotropin-releasing hormone receptor binding
GO:0043069 P negative regulation of programmed cell death
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043193 P positive regulation of transcription, DNA-templated
GO:0043234 C protein-containing complex
3158 S06A01NCLL0008_A15
105bp
unknown/
0bp
UniRef50_Q7MV27 (44%/27)
Cluster: Putative uncharacterized protein; n=2; Porphyromonadaceae|Rep: Putative uncharacterized protein - Porphyromonas gingivalis (Bacteroides gingivalis)
3159 S06A01NCLL0008_A16
333bp
unknown/
0bp
UniRef50_Q9U0H2 (39%/51)
Cluster: Putative uncharacterized protein PFD0585c; n=2; Plasmodium|Rep: Putative uncharacterized protein PFD0585c - Plasmodium falciparum (isolate 3D7)
3160 S06A01NCLL0008_A17
587bp
unknown/
0bp
UniRef50_A7HU13 (41%/41)
Cluster: GntR domain protein; n=1; Parvibaculum lavamentivorans DS-1|Rep: GntR domain protein - Parvibaculum lavamentivorans DS-1
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0006355 P regulation of transcription, DNA-templated
3161 S06A01NCLL0008_A18
662bp
unknown/
0bp
UniRef50_P62424 (69%/149)
Cluster: 60S ribosomal protein L7a; n=226; Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005624 C obsolete membrane fraction
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0042788 C polysomal ribosome
3162 S06A01NCLL0008_A19
612bp
unknown/
0bp
UniRef50_P62424 (57%/122)
Cluster: 60S ribosomal protein L7a; n=226; Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005624 C obsolete membrane fraction
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
GO:0042788 C polysomal ribosome
3163 S06A01NCLL0008_A20
480bp
unknown/
0bp
UniRef50_P62910 (81%/133)
Cluster: 60S ribosomal protein L32; n=83; Eukaryota|Rep: 60S ribosomal protein L32 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0005842 C cytosolic large ribosomal subunit
3164 S06A01NCLL0008_A21
450bp
unknown/
0bp
UniRef50_P62753 (80%/136)
Cluster: 40S ribosomal protein S6; n=203; Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0042593 P glucose homeostasis
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0006334 P nucleosome assembly
3165 S06A01NCLL0008_A22
588bp
unknown/
0bp
UniRef50_Q7PXI9 (51%/78)
Cluster: ENSANGP00000015826; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000015826 - Anopheles gambiae str. PEST
GO:0005524 F ATP binding
GO:0006457 P protein folding
GO:0051082 F unfolded protein binding
GO:0006950 P response to stress
GO:0001666 P response to hypoxia
GO:0003723 F RNA binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005789 C endoplasmic reticulum membrane
GO:0005792 C obsolete microsome
GO:0005829 C cytosol
GO:0006916 P negative regulation of apoptotic process
GO:0015031 P protein transport
GO:0046790 F virion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050750 F low-density lipoprotein particle receptor binding
GO:0051208 P sequestering of calcium ion
GO:0005739 C mitochondrion
GO:0009409 P response to cold
3166 S06A01NCLL0008_A23
604bp
unknown/
0bp
UniRef50_Q5TP28 (51%/95)
Cluster: ENSANGP00000028376; n=2; Endopterygota|Rep: ENSANGP00000028376 - Anopheles gambiae str. PEST
GO:0005515 F protein binding
3167 S06A01NCLL0008_A24
391bp
unknown/
0bp
UniRef50_O82966 (30%/72)
Cluster: ORF C6; n=2; root|Rep: ORF C6 - Ralstonia solanacearum (Pseudomonas solanacearum)
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0008409 F 5'-3' exonuclease activity
GO:0003676 F nucleic acid binding
GO:0015074 P DNA integration
3168 S06A01NCLL0008_B01
337bp
unknown/
0bp
UniRef50_Q9VY28 (68%/87)
Cluster: Probable mitochondrial 28S ribosomal protein S25; n=3; Endopterygota|Rep: Probable mitochondrial 28S ribosomal protein S25 - Drosophila melanogaster (Fruit fly)
GO:0005739 C mitochondrion
GO:0030529 C ribonucleoprotein complex
GO:0003735 F structural constituent of ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0006412 P translation
GO:0009792 P embryo development ending in birth or egg hatching
3169 S06A01NCLL0008_B02
481bp
unknown/
0bp
UniRef50_UPI0000498845 (26%/87)
Cluster: hypothetical protein 112.t00016; n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical protein 112.t00016 - Entamoeba histolytica HM-1:IMSS
3170 S06A01NCLL0008_B03
255bp
unknown/
0bp
UniRef50_A0FDQ1 (88%/17)
Cluster: Bax inhibitor-1-like protein; n=7; Neoptera|Rep: Bax inhibitor-1-like protein - Bombyx mori (Silk moth)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0005097 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0032313 P regulation of GTPase activity
3171 S06A01NCLL0008_B04
507bp
unknown/
0bp
UniRef50_Q9W5R8 (74%/166)
Cluster: 60S ribosomal protein L5; n=67; Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008097 F 5S rRNA binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040018 P positive regulation of multicellular organism growth
GO:0040035 P hermaphrodite genitalia development
3172 S06A01NCLL0008_B05
492bp
unknown/
0bp
UniRef50_P05388 (77%/137)
Cluster: 60S acidic ribosomal protein P0; n=171; Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0030529 C ribonucleoprotein complex
GO:0042254 P ribosome biogenesis
3173 S06A01NCLL0008_B06
675bp
unknown/
0bp
UniRef50_Q9U762 (72%/215)
Cluster: 40S ribosomal protein S6; n=10; Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes albopictus (Forest day mosquito)
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005840 C ribosome
GO:0006334 P nucleosome assembly
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005843 C cytosolic small ribosomal subunit
GO:0015935 C small ribosomal subunit
GO:0042593 P glucose homeostasis
3174 S06A01NCLL0008_B07
527bp
unknown/
0bp
UniRef50_UPI0000D5781F (85%/85)
Cluster: PREDICTED: similar to CG9755-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG9755-PA, isoform A - Tribolium castaneum
3175 S06A01NCLL0008_B08
510bp
unknown/
0bp
UniRef50_UPI00015B5A89 (27%/161)
Cluster: PREDICTED: similar to papilin; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to papilin - Nasonia vitripennis
3176 S06A01NCLL0008_B09
482bp
unknown/
0bp
UniRef50_Q7PY55 (64%/102)
Cluster: ENSANGP00000013280; n=4; Endopterygota|Rep: ENSANGP00000013280 - Anopheles gambiae str. PEST
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
3177 S06A01NCLL0008_B10
583bp
unknown/
0bp
UniRef50_Q25490 (63%/132)
Cluster: Apolipophorins precursor [Contains: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5; Ditrysia|Rep: Apolipophorins precursor [Contains: Apolipophorin-2 (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005319 F lipid transporter activity
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
GO:0004871 F obsolete signal transducer activity
GO:0006935 P chemotaxis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0005524 F ATP binding
GO:0006457 P protein folding
GO:0051082 F unfolded protein binding
3178 S06A01NCLL0008_B11
485bp
unknown/
0bp
UniRef50_Q152R4 (51%/152)
Cluster: SCP-related protein; n=1; Bombyx mori|Rep: SCP-related protein - Bombyx mori (Silk moth)
GO:0005576 C extracellular region
GO:0005515 F protein binding
3179 S06A01NCLL0008_B12
580bp
unknown/
0bp
UniRef50_Q0Z936 (48%/192)
Cluster: Imaginal disc growth factor 2; n=1; Tribolium castaneum|Rep: Imaginal disc growth factor 2 - Tribolium castaneum (Red flour beetle)
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0043169 F cation binding
GO:0006036 P cuticle chitin catabolic process
GO:0007275 P multicellular organism development
3180 S06A01NCLL0008_B13
517bp
unknown/
0bp
UniRef50_P04350 (71%/153)
Cluster: Tubulin beta-4 chain; n=4602; root|Rep: Tubulin beta-4 chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0000212 P meiotic spindle organization
GO:0002119 P nematode larval development
GO:0005737 C cytoplasm
GO:0007051 P spindle organization
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
previous next from show/7408

- SilkBase 1999-2023 -