SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Samia ricini Search

previous next from show/7408
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
2851 S06A01NCLL0007_D16
588bp
unknown/
0bp
UniRef50_Q0E940 (68%/194)
Cluster: CG4878-PA, isoform A; n=4; Diptera|Rep: CG4878-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0006413 P translational initiation
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006412 P translation
2852 S06A01NCLL0007_D17
672bp
unknown/
0bp
UniRef50_UPI0000D57918 (61%/135)
Cluster: PREDICTED: similar to CG8003-PA, partial; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG8003-PA, partial - Tribolium castaneum
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2853 S06A01NCLL0007_D18
411bp
unknown/
0bp
UniRef50_Q5UAT5 (72%/101)
Cluster: 60S ribosomal protein L6; n=15; Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori (Silk moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0006355 P regulation of transcription, DNA-templated
2854 S06A01NCLL0007_D19
516bp
unknown/
0bp
UniRef50_Q7K3W4 (34%/97)
Cluster: GH08941p; n=2; Sophophora|Rep: GH08941p - Drosophila melanogaster (Fruit fly)
GO:0004180 F carboxypeptidase activity
GO:0004182 F obsolete carboxypeptidase A activity
GO:0006508 P proteolysis
GO:0008270 F zinc ion binding
2855 S06A01NCLL0007_D20
436bp
unknown/
0bp
UniRef50_UPI0000DB6F3D (34%/138)
Cluster: PREDICTED: similar to zinc finger protein 235; n=1; Apis mellifera|Rep: PREDICTED: similar to zinc finger protein 235 - Apis mellifera
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
2856 S06A01NCLL0007_D21
557bp
unknown/
0bp
UniRef50_P41042 (79%/168)
Cluster: 40S ribosomal protein S4; n=38; Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005811 C lipid droplet
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0000074 P regulation of cell cycle
GO:0005843 C cytosolic small ribosomal subunit
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0005737 C cytoplasm
2857 S06A01NCLL0007_D22
344bp
unknown/
0bp
UniRef50_P36241 (91%/95)
Cluster: 60S ribosomal protein L19; n=141; Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
2858 S06A01NCLL0007_D23
508bp
unknown/
0bp
UniRef50_A6YPG5 (85%/134)
Cluster: 40S ribosomal protein S11; n=7; Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma infestans (Assassin bug)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0005843 C cytosolic small ribosomal subunit
GO:0019843 F rRNA binding
GO:0000028 P ribosomal small subunit assembly
GO:0000723 P telomere maintenance
GO:0005737 C cytoplasm
GO:0006450 P regulation of translational fidelity
GO:0005634 C nucleus
GO:0005829 C cytosol
2859 S06A01NCLL0007_D24
536bp
unknown/
0bp
UniRef50_P08865 (77%/146)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
2860 S06A01NCLL0007_E01
505bp
unknown/
0bp
UniRef50_UPI00015B6175 (57%/77)
Cluster: PREDICTED: similar to structure-specific recognition protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to structure-specific recognition protein - Nasonia vitripennis
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0000785 C chromatin
GO:0005515 F protein binding
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006350 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
2861 S06A01NCLL0007_E02
391bp
unknown/
0bp
UniRef50_Q17GZ9 (43%/105)
Cluster: Actin-related protein 5; n=4; Endopterygota|Rep: Actin-related protein 5 - Aedes aegypti (Yellowfever mosquito)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016585 C obsolete chromatin remodeling complex
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
2862 S06A01NCLL0007_E03
479bp
unknown/
0bp
UniRef50_O96261 (39%/43)
Cluster: Putative uncharacterized protein PFB0845w; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein PFB0845w - Plasmodium falciparum (isolate 3D7)
2863 S06A01NCLL0007_E04
532bp
unknown/
0bp
UniRef50_P49448 (68%/87)
Cluster: Glutamate dehydrogenase 2, mitochondrial precursor; n=91; Eumetazoa|Rep: Glutamate dehydrogenase 2, mitochondrial precursor - Homo sapiens (Human)
GO:0004352 F glutamate dehydrogenase (NAD+) activity
GO:0004353 F glutamate dehydrogenase [NAD(P)+] activity
GO:0005739 C mitochondrion
GO:0006118 P obsolete electron transport
GO:0006520 P cellular amino acid metabolic process
GO:0006536 P glutamate metabolic process
GO:0016491 F oxidoreductase activity
2864 S06A01NCLL0007_E05
545bp
unknown/
0bp
UniRef50_Q9L0M8 (50%/26)
Cluster: Putative ATP/GTP binding protein; n=4; Streptomyces coelicolor|Rep: Putative ATP/GTP binding protein - Streptomyces coelicolor
GO:0004888 F transmembrane signaling receptor activity
GO:0005488 F binding
GO:0006952 P defense response
GO:0007165 P signal transduction
GO:0031224 C intrinsic component of membrane
GO:0045087 P innate immune response
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006333 P chromatin assembly or disassembly
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0043565 F sequence-specific DNA binding
2865 S06A01NCLL0007_E06
508bp
unknown/
0bp
UniRef50_UPI00005A4635 (95%/151)
Cluster: PREDICTED: similar to statin-like; n=2; Canis lupus familiaris|Rep: PREDICTED: similar to statin-like - Canis familiaris
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
2866 S06A01NCLL0007_E07
448bp
unknown/
0bp
UniRef50_Q16576 (79%/107)
Cluster: Histone-binding protein RBBP7; n=100; Eukaryota|Rep: Histone-binding protein RBBP7 - Homo sapiens (Human)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0016568 P chromatin organization
GO:0009908 P flower development
GO:0030154 P cell differentiation
GO:0004402 F histone acetyltransferase activity
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008415 F acyltransferase activity
GO:0016740 F transferase activity
2867 S06A01NCLL0007_E08
444bp
unknown/
0bp
UniRef50_P25153 (98%/72)
Cluster: Ubiquitin-conjugating enzyme E2-17 kDa; n=93; Eukaryota|Rep: Ubiquitin-conjugating enzyme E2-17 kDa - Drosophila melanogaster (Fruit fly)
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006464 P cellular protein modification process
GO:0006512 P obsolete ubiquitin cycle
GO:0006974 P cellular response to DNA damage stimulus
GO:0016874 F ligase activity
GO:0019787 F ubiquitin-like protein transferase activity
GO:0000785 C chromatin
GO:0005515 F protein binding
GO:0006301 P postreplication repair
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007288 P sperm axoneme assembly
GO:0016020 C membrane
2868 S06A01NCLL0007_E09
581bp
unknown/
0bp
UniRef50_P04350 (82%/169)
Cluster: Tubulin beta-4 chain; n=4602; root|Rep: Tubulin beta-4 chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0000212 P meiotic spindle organization
GO:0002119 P nematode larval development
GO:0005737 C cytoplasm
GO:0007051 P spindle organization
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
2869 S06A01NCLL0007_E10
643bp
unknown/
0bp
UniRef50_Q5MGK5 (80%/169)
Cluster: Ribosomal protein 23; n=2; Endopterygota|Rep: Ribosomal protein 23 - Lonomia obliqua (Moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0005811 C lipid droplet
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
2870 S06A01NCLL0007_E11
582bp
unknown/
0bp
UniRef50_Q08180 (33%/163)
Cluster: Irregular chiasm C-roughest protein precursor; n=5; Drosophila|Rep: Irregular chiasm C-roughest protein precursor - Drosophila melanogaster (Fruit fly)
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016202 P regulation of striated muscle tissue development
GO:0046666 P retinal cell programmed cell death
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048749 P compound eye development
GO:0005912 C adherens junction
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007523 P larval visceral muscle development
GO:0009986 C cell surface
2871 S06A01NCLL0007_E12
482bp
unknown/
0bp
UniRef50_P62910 (81%/133)
Cluster: 60S ribosomal protein L32; n=83; Eukaryota|Rep: 60S ribosomal protein L32 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0005842 C cytosolic large ribosomal subunit
2872 S06A01NCLL0007_E13
480bp
unknown/
0bp
UniRef50_Q7RJX1 (36%/66)
Cluster: Putative uncharacterized protein PY03134; n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein PY03134 - Plasmodium yoelii yoelii
2873 S06A01NCLL0007_E14
520bp
unknown/
0bp
UniRef50_Q9VY06 (52%/121)
Cluster: CG9514-PA; n=2; Drosophila melanogaster|Rep: CG9514-PA - Drosophila melanogaster (Fruit fly)
GO:0006118 P obsolete electron transport
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 F flavin adenine dinucleotide binding
GO:0006066 P alcohol metabolic process
2874 S06A01NCLL0007_E15
650bp
unknown/
0bp
UniRef50_P62241 (49%/191)
Cluster: 40S ribosomal protein S8; n=93; Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2875 S06A01NCLL0007_E16
494bp
unknown/
0bp
UniRef50_Q08473 (80%/35)
Cluster: RNA-binding protein squid; n=22; Endopterygota|Rep: RNA-binding protein squid - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0007293 P germarium-derived egg chamber formation
GO:0007297 P ovarian follicle cell migration
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0008298 P intracellular mRNA localization
GO:0009953 P dorsal/ventral pattern formation
GO:0017148 P negative regulation of translation
GO:0019094 P pole plasm mRNA localization
GO:0030529 C ribonucleoprotein complex
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0035062 C omega speckle
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0001709 P cell fate determination
GO:0003729 F mRNA binding
GO:0019827 P stem cell population maintenance
GO:0042078 P germ-line stem cell division
GO:0045182 F translation regulator activity
2876 S06A01NCLL0007_E17
561bp
unknown/
0bp
UniRef50_Q9W5R8 (81%/168)
Cluster: 60S ribosomal protein L5; n=67; Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0008097 F 5S rRNA binding
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0005634 C nucleus
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
GO:0040018 P positive regulation of multicellular organism growth
GO:0040035 P hermaphrodite genitalia development
2877 S06A01NCLL0007_E18
441bp
unknown/
0bp
UniRef50_Q41A67 (41%/36)
Cluster: Similar to Esterase/lipase precursor; n=1; Exiguobacterium sibiricum 255-15|Rep: Similar to Esterase/lipase precursor - Exiguobacterium sibiricum 255-15
2878 S06A01NCLL0007_E19
566bp
unknown/
0bp
UniRef50_Q16VP6 (50%/34)
Cluster: Putative uncharacterized protein; n=2; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0005515 F protein binding
GO:0045735 F nutrient reservoir activity
2879 S06A01NCLL0007_E20
155bp
unknown/
0bp
UniRef50_Q5XNP2 (53%/30)
Cluster: Putative translation elongation factor 1 gamma; n=1; Aedes aegypti|Rep: Putative translation elongation factor 1 gamma - Aedes aegypti (Yellowfever mosquito)
GO:0003746 F translation elongation factor activity
2880 S06A01NCLL0007_E21
452bp
unknown/
0bp
UniRef50_Q1HQP9 (57%/144)
Cluster: COP9 signalosome subunit CSN7; n=5; Endopterygota|Rep: COP9 signalosome subunit CSN7 - Aedes aegypti (Yellowfever mosquito)
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008180 C COP9 signalosome
previous next from show/7408

- SilkBase 1999-2023 -