SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/9984
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
5371 fdpeP14_F_P19.2
1241bp
chromo14/Bm_scaf38
4008358bp
UniRef50_Q1HQB9 (82%/284)
Cluster: Nucleosome assembly protein isoform 1; n=7; Coelomata|Rep: Nucleosome assembly protein isoform 1 - Bombyx mori (Silk moth)
GO:0005634 C nucleus
GO:0006334 P nucleosome assembly
GO:0005515 F protein binding
GO:0005678 C obsolete chromatin assembly complex
GO:0006260 P DNA replication
GO:0008284 P positive regulation of cell population proliferation
5372 fdpeP14_F_P20.2
1235bp
chromo4/Bm_scaf13
6731059bp
UniRef50_P63162 (42%/152)
Cluster: Small nuclear ribonucleoprotein-associated protein N; n=94; Eukaryota|Rep: Small nuclear ribonucleoprotein-associated protein N - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0008380 P RNA splicing
GO:0016071 P mRNA metabolic process
GO:0030529 C ribonucleoprotein complex
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0042802 F identical protein binding
5373 fdpeP14_F_P21.2
1289bp
unknown/
0bp
UniRef50_Q6C9I8 (37%/61)
Cluster: Similar to sp|P41832 Saccharomyces cerevisiae YNL271c BNI1 regulator of budding; n=1; Yarrowia lipolytica|Rep: Similar to sp|P41832 Saccharomyces cerevisiae YNL271c BNI1 regulator of budding - Yarrowia lipolytica (Candida lipolytica)
GO:0003779 F actin binding
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
5374 fdpeP14_F_P22.2
1288bp
unknown/
0bp
UniRef50_UPI00015B4AC1 (25%/163)
Cluster: PREDICTED: similar to conserved hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to conserved hypothetical protein - Nasonia vitripennis
GO:0003779 F actin binding
GO:0016043 P cellular component organization
GO:0030036 P actin cytoskeleton organization
5375 fdpeP14_F_P23.2
1226bp
chromo3/Bm_scaf17
6395444bp
UniRef50_UPI0000D56C66 (59%/185)
Cluster: PREDICTED: similar to CG3625-PB, isoform B isoform 2; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG3625-PB, isoform B isoform 2 - Tribolium castaneum
GO:0016021 C integral component of membrane
GO:0005515 F protein binding
5376 fdpeP14_F_P24.2
1205bp
chromo22/Bm_scaf69
2045043bp
UniRef50_Q9VVB5 (41%/81)
Cluster: CG32171-PB, isoform B; n=25; Bilateria|Rep: CG32171-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
5377 fdpeP15_F_A01
902bp
chromo20/Bm_scaf152
336332bp
UniRef50_Q86NN8 (59%/121)
Cluster: RH49324p; n=16; Arthropoda|Rep: RH49324p - Drosophila melanogaster (Fruit fly)
GO:0004129 F cytochrome-c oxidase activity
GO:0005740 C mitochondrial envelope
GO:0005811 C lipid droplet
GO:0006118 P obsolete electron transport
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0006629 P lipid metabolic process
GO:0008340 P determination of adult lifespan
GO:0009792 P embryo development ending in birth or egg hatching
GO:0018987 P water homeostasis
GO:0019915 P lipid storage
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
5378 fdpeP15_F_A02
907bp
chromo1/Bm_scaf23
5097954bp
UniRef50_Q9W4K8 (48%/184)
Cluster: CG3626-PA; n=7; Endopterygota|Rep: CG3626-PA - Drosophila melanogaster (Fruit fly)
GO:0004047 F aminomethyltransferase activity
GO:0005737 C cytoplasm
GO:0006546 P glycine catabolic process
GO:0016491 F oxidoreductase activity
5379 fdpeP15_F_A03
919bp
chromo11/Bm_scaf16
6248677bp
UniRef50_UPI0000D55AB6 (40%/124)
Cluster: PREDICTED: similar to Chromobox protein homolog 5 (Heterochromatin protein 1 homolog alpha) (HP1 alpha); n=1; Tribolium castaneum|Rep: PREDICTED: similar to Chromobox protein homolog 5 (Heterochromatin protein 1 homolog alpha) (HP1 alpha) - Tribolium castaneum
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0001939 C female pronucleus
GO:0001940 C male pronucleus
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005701 C polytene chromosome chromocenter
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0006333 P chromatin assembly or disassembly
GO:0042802 F identical protein binding
5380 fdpeP15_F_A04
935bp
chromo8/Bm_scaf19
6098939bp
UniRef50_Q7YU95 (60%/121)
Cluster: NADH-ubiquinone oxidoreductase; n=5; Arthropoda|Rep: NADH-ubiquinone oxidoreductase - Ixodes ricinus (Sheep tick)
GO:0003954 F NADH dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0006979 P response to oxidative stress
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0031966 C mitochondrial membrane
5381 fdpeP15_F_A05
911bp
chromo11/Bm_scaf16
6248677bp
UniRef50_UPI00003BFDF7 (30%/190)
Cluster: PREDICTED: similar to CG17233-PA, isoform A; n=2; Apocrita|Rep: PREDICTED: similar to CG17233-PA, isoform A - Apis mellifera
5382 fdpeP15_F_A06
893bp
chromo9/Bm_scaf56
2585024bp
UniRef50_Q1JSS7 (40%/50)
Cluster: Inositol hexaphosphate kinase 3, putative; n=1; Toxoplasma gondii|Rep: Inositol hexaphosphate kinase 3, putative - Toxoplasma gondii
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0050517 F obsolete inositol hexakisphosphate kinase activity
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003824 F catalytic activity
GO:0005622 C intracellular anatomical structure
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008483 F transaminase activity
GO:0009058 P biosynthetic process
GO:0016769 F transferase activity, transferring nitrogenous groups
GO:0030170 F pyridoxal phosphate binding
5383 fdpeP15_F_A07
912bp
unknown/
0bp
UniRef50_Q4RLQ7 (33%/66)
Cluster: Chromosome 10 SCAF15019, whole genome shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10 SCAF15019, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0003779 F actin binding
GO:0015629 C actin cytoskeleton
GO:0030036 P actin cytoskeleton organization
GO:0016043 P cellular component organization
GO:0007049 P cell cycle
GO:0017048 F small GTPase binding
GO:0051301 P cell division
5384 fdpeP15_F_A08
909bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q05639 (78%/241)
Cluster: Elongation factor 1-alpha 2; n=8397; root|Rep: Elongation factor 1-alpha 2 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
5385 fdpeP15_F_A09
912bp
unknown/
0bp
UniRef50_Q5QJQ3 (74%/107)
Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium
5386 fdpeP15_F_A10
945bp
unknown/
0bp
UniRef50_Q5QJQ3 (60%/81)
Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium
GO:0003964 F RNA-directed DNA polymerase activity
5387 fdpeP15_F_A11
923bp
unknown/
0bp
UniRef50_Q5QJQ3 (92%/126)
Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium
5388 fdpeP15_F_A12
914bp
unknown/
0bp
UniRef50_P62987 (88%/17)
Cluster: 60S ribosomal protein L40; n=164; Eukaryota|Rep: 60S ribosomal protein L40 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006464 P cellular protein modification process
GO:0030529 C ribonucleoprotein complex
5389 fdpeP15_F_A13
905bp
unknown/
0bp
UniRef50_Q7RPR6 (51%/27)
Cluster: Eukaryotic ribosomal protein L18, putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic ribosomal protein L18, putative - Plasmodium yoelii yoelii
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
5390 fdpeP15_F_A14
902bp
unknown/
0bp
UniRef50_Q5QJQ3 (90%/123)
Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium
5391 fdpeP15_F_A15
898bp
unknown/
0bp
UniRef50_Q5QJQ3 (91%/114)
Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium
5392 fdpeP15_F_A16
888bp
unknown/
0bp
(no hit)
5393 fdpeP15_F_A17
920bp
chromo12/Bm_scaf6
8265254bp
UniRef50_UPI0000D55C7C (53%/151)
Cluster: PREDICTED: similar to CG4552-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG4552-PA - Tribolium castaneum
GO:0005097 F GTPase activator activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0032313 P regulation of GTPase activity
5394 fdpeP15_F_A18
973bp
unknown/
0bp
UniRef50_Q3HTK5 (21%/170)
Cluster: Pherophorin-C2 protein precursor; n=8; Chlamydomonadales|Rep: Pherophorin-C2 protein precursor - Chlamydomonas reinhardtii
GO:0003824 F catalytic activity
GO:0005199 F structural constituent of cell wall
GO:0019867 C outer membrane
5395 fdpeP15_F_A19
899bp
chromo4/Bm_scaf5
8683647bp
UniRef50_P42766 (58%/123)
Cluster: 60S ribosomal protein L35; n=81; Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens (Human)
GO:0003729 F mRNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
5396 fdpeP15_F_A20
974bp
unknown/
0bp
(no hit)
5397 fdpeP15_F_A21
912bp
chromo2/Bm_scaf27
4962828bp
UniRef50_UPI000066070E (97%/83)
Cluster: Homolog of Homo sapiens "H2A histone family, member X (H2AFX), mRNA; n=2; Takifugu rubripes|Rep: Homolog of Homo sapiens "H2A histone family, member X (H2AFX), mRNA - Takifugu rubripes
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006334 P nucleosome assembly
GO:0007001 P chromosome organization
GO:0005515 F protein binding
GO:0006325 P chromatin organization
GO:0048015 P phosphatidylinositol-mediated signaling
5398 fdpeP15_F_A22
920bp
unknown/
0bp
UniRef50_Q7JP75 (50%/30)
Cluster: Cytokinesis defect protein 1, isoform b; n=6; cellular organisms|Rep: Cytokinesis defect protein 1, isoform b - Caenorhabditis elegans
GO:0003779 F actin binding
GO:0005826 C actomyosin contractile ring
GO:0009898 C cytoplasmic side of plasma membrane
GO:0016043 P cellular component organization
GO:0030036 P actin cytoskeleton organization
GO:0032154 C cleavage furrow
5399 fdpeP15_F_A23
927bp
chromo23/Bm_scaf83
1589841bp
UniRef50_P61254 (76%/105)
Cluster: 60S ribosomal protein L26; n=96; Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
5400 fdpeP15_F_A24
902bp
chromo5/Bm_scaf20
5834375bp
UniRef50_P61981 (71%/239)
Cluster: 14-3-3 protein gamma; n=627; Eukaryota|Rep: 14-3-3 protein gamma - Homo sapiens (Human)
GO:0005080 F protein kinase C binding
GO:0005159 F insulin-like growth factor receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0006605 P protein targeting
GO:0008426 F protein kinase C inhibitor activity
GO:0009966 P regulation of signal transduction
GO:0019904 F protein domain specific binding
GO:0045664 P regulation of neuron differentiation
GO:0048167 P regulation of synaptic plasticity
GO:0007242 P intracellular signal transduction
GO:0019899 F enzyme binding
previous next from show/9984

- SilkBase 1999-2023 -