SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/9984
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
2851 fdpeP08_F_G19
913bp
chromo3/Bm_scaf169
252013bp
UniRef50_UPI00015B604D (47%/120)
Cluster: PREDICTED: similar to histone H2B; n=4; Nasonia vitripennis|Rep: PREDICTED: similar to histone H2B - Nasonia vitripennis
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006334 P nucleosome assembly
GO:0007001 P chromosome organization
2852 fdpeP08_F_G20
819bp
unknown/Bm_scaf1363
4320bp
UniRef50_P18935 (38%/153)
Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome b - Drosophila melanogaster (Fruit fly)
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
2853 fdpeP08_F_G21
866bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q9Y2M5 (50%/126)
Cluster: Kelch-like protein 20; n=48; Eumetazoa|Rep: Kelch-like protein 20 - Homo sapiens (Human)
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0007010 P cytoskeleton organization
GO:0009986 C cell surface
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
2854 fdpeP08_F_G22
888bp
chromo21/Bm_scaf7
8313734bp
UniRef50_P62841 (75%/120)
Cluster: 40S ribosomal protein S15; n=46; cellular organisms|Rep: 40S ribosomal protein S15 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000056 P ribosomal small subunit export from nucleus
GO:0005737 C cytoplasm
GO:0042254 P ribosome biogenesis
2855 fdpeP08_F_G23
902bp
chromo19/Bm_scaf36
4352778bp
UniRef50_UPI00015B5C2E (91%/255)
Cluster: PREDICTED: similar to cdk5; n=2; Apocrita|Rep: PREDICTED: similar to cdk5 - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0051301 P cell division
GO:0000074 P regulation of cell cycle
GO:0007067 P mitotic cell cycle
GO:0008283 P cell population proliferation
2856 fdpeP08_F_G24
879bp
chromo3/Bm_scaf17
6395444bp
UniRef50_A6FFM1 (26%/91)
Cluster: Hypothetical methyl-accepting chemotaxis protein; n=1; Moritella sp. PE36|Rep: Hypothetical methyl-accepting chemotaxis protein - Moritella sp. PE36
GO:0004871 F obsolete signal transducer activity
GO:0006935 P chemotaxis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0006355 P regulation of transcription, DNA-templated
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
2857 fdpeP08_F_H01
880bp
chromo12/Bm_scaf67
2138634bp
UniRef50_P19623 (59%/198)
Cluster: Spermidine synthase; n=81; Fungi/Metazoa group|Rep: Spermidine synthase - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0004766 F spermidine synthase activity
GO:0008295 P spermidine biosynthetic process
GO:0016740 F transferase activity
2858 fdpeP08_F_H02
850bp
chromo19/Bm_scaf60
2449460bp
UniRef50_Q8IH26 (74%/35)
Cluster: GM20929p; n=4; Diptera|Rep: GM20929p - Drosophila melanogaster (Fruit fly)
GO:0016740 F transferase activity
2859 fdpeP08_F_H03
939bp
unknown/
0bp
UniRef50_Q5QJQ3 (50%/106)
Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium
2860 fdpeP08_F_H04
890bp
chromo3/Bm_scaf102
1187377bp
UniRef50_Q9VJY8 (61%/120)
Cluster: CG9293-PA, isoform A; n=6; Diptera|Rep: CG9293-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0006412 P translation
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0005634 C nucleus
GO:0006473 P protein acetylation
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045926 P negative regulation of growth
GO:0001558 P regulation of cell growth
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
2861 fdpeP08_F_H05
861bp
unknown/
0bp
UniRef50_Q6UUU1 (56%/119)
Cluster: Putative uncharacterized protein; n=1; Escherichia coli|Rep: Putative uncharacterized protein - Escherichia coli
2862 fdpeP08_F_H06
887bp
chromo19/Bm_scaf36
4352778bp
UniRef50_Q9VCD0 (34%/190)
Cluster: CG5463-PA; n=7; Endopterygota|Rep: CG5463-PA - Drosophila melanogaster (Fruit fly)
GO:0006412 P translation
GO:0016874 F ligase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0050567 F glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
GO:0005739 C mitochondrion
GO:0008135 F translation factor activity, RNA binding
2863 fdpeP08_F_H07
887bp
unknown/
0bp
UniRef50_Q9FLQ7 (31%/159)
Cluster: Gb|AAD23008.1; n=1; Arabidopsis thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana (Mouse-ear cress)
2864 fdpeP08_F_H08
838bp
chromo17/Bm_scaf21
5628829bp
UniRef50_Q7PQ81 (43%/150)
Cluster: ENSANGP00000003976; n=2; Culicidae|Rep: ENSANGP00000003976 - Anopheles gambiae str. PEST
2865 fdpeP08_F_H09
949bp
unknown/
0bp
UniRef50_A1Z8H7 (35%/111)
Cluster: CG13214-PA, isoform A; n=5; Eukaryota|Rep: CG13214-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0042302 F structural constituent of cuticle
2866 fdpeP08_F_H10
862bp
chromo12/Bm_scaf6
8265254bp
UniRef50_P40925 (55%/206)
Cluster: Malate dehydrogenase, cytoplasmic; n=124; cellular organisms|Rep: Malate dehydrogenase, cytoplasmic - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0004470 F malic enzyme activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0006099 P tricarboxylic acid cycle
GO:0006100 P obsolete tricarboxylic acid cycle intermediate metabolic process
GO:0006108 P malate metabolic process
GO:0016491 F oxidoreductase activity
GO:0016615 F malate dehydrogenase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0030060 F L-malate dehydrogenase activity
GO:0044262 P cellular carbohydrate metabolic process
2867 fdpeP08_F_H11
857bp
chromo23/Bm_scaf139
534598bp
UniRef50_Q402D2 (83%/222)
Cluster: Putative uncharacterized protein e96h0303; n=1; Bombyx mori|Rep: Putative uncharacterized protein e96h0303 - Bombyx mori (Silk moth)
2868 fdpeP08_F_H12
906bp
unknown/
0bp
UniRef50_Q54VW5 (29%/102)
Cluster: Putative uncharacterized protein; n=2; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
2869 fdpeP08_F_H13
870bp
unknown/
0bp
UniRef50_Q5QJQ3 (98%/97)
Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium
2870 fdpeP08_F_H14
838bp
chromo15/Bm_scaf3
9954263bp
UniRef50_UPI00015B4239 (42%/224)
Cluster: PREDICTED: similar to ENSANGP00000018877; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000018877 - Nasonia vitripennis
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0006030 P chitin metabolic process
GO:0008061 F chitin binding
2871 fdpeP08_F_H15
898bp
chromo14/Bm_scaf53
2821953bp
UniRef50_P23396 (86%/226)
Cluster: 40S ribosomal protein S3; n=174; Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
2872 fdpeP08_F_H16
961bp
chromo5/Bm_scaf20
5834375bp
UniRef50_UPI000051A0C1 (27%/153)
Cluster: PREDICTED: similar to muted; n=2; Apocrita|Rep: PREDICTED: similar to muted - Apis mellifera
GO:0016192 P vesicle-mediated transport
GO:0048066 P developmental pigmentation
GO:0005515 F protein binding
GO:0005788 C endoplasmic reticulum lumen
2873 fdpeP08_F_H17
853bp
chromo22/Bm_scaf61
2256882bp
UniRef50_UPI0000E23555 (31%/76)
Cluster: PREDICTED: hypothetical protein; n=1; Pan troglodytes|Rep: PREDICTED: hypothetical protein - Pan troglodytes
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2874 fdpeP08_F_H18
882bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q26457 (44%/132)
Cluster: La protein homolog; n=4; Culicidae|Rep: La protein homolog - Aedes albopictus (Forest day mosquito)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0008098 F 5S rRNA primary transcript binding
2875 fdpeP08_F_H19
864bp
unknown/Bm_scaf146
406881bp
UniRef50_UPI0000F2BDD1 (70%/80)
Cluster: PREDICTED: similar to Cks1 protein homologue; n=1; Monodelphis domestica|Rep: PREDICTED: similar to Cks1 protein homologue - Monodelphis domestica
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007127 P meiosis I
GO:0008283 P cell population proliferation
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0051301 P cell division
GO:0005515 F protein binding
GO:0009792 P embryo development ending in birth or egg hatching
2876 fdpeP08_F_H20
838bp
chromo16/Bm_scaf4
9119588bp
UniRef50_UPI00005BCCBE (28%/107)
Cluster: PREDICTED: similar to CSPG3 variant protein isoform 2; n=3; Theria|Rep: PREDICTED: similar to CSPG3 variant protein isoform 2 - Bos taurus
GO:0009306 P protein secretion
GO:0016020 C membrane
GO:0005524 F ATP binding
GO:0006298 P mismatch repair
GO:0030983 F mismatched DNA binding
2877 fdpeP08_F_H21
886bp
chromo16/Bm_scaf4
9119588bp
UniRef50_P13276 (54%/164)
Cluster: Apolipophorin-3 precursor; n=11; Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0005515 F protein binding
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0003676 F nucleic acid binding
GO:0005516 F calmodulin binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005622 C intracellular anatomical structure
GO:0005624 C obsolete membrane fraction
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006906 P vesicle fusion
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016189 P synaptic vesicle to endosome fusion
GO:0019897 C extrinsic component of plasma membrane
GO:0030742 F GTP-dependent protein binding
GO:0042803 F protein homodimerization activity
GO:0045022 P early endosome to late endosome transport
GO:0046872 F metal ion binding
2878 fdpeP08_F_H22
902bp
chromo6/Bm_scaf111
965032bp
UniRef50_Q08473 (72%/205)
Cluster: RNA-binding protein squid; n=22; Endopterygota|Rep: RNA-binding protein squid - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0007293 P germarium-derived egg chamber formation
GO:0007297 P ovarian follicle cell migration
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0008298 P intracellular mRNA localization
GO:0009953 P dorsal/ventral pattern formation
GO:0017148 P negative regulation of translation
GO:0019094 P pole plasm mRNA localization
GO:0030529 C ribonucleoprotein complex
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0035062 C omega speckle
GO:0000781 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005694 C chromosome
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006401 P RNA catabolic process
GO:0008150 P biological_process
GO:0016563 F obsolete transcription activator activity
GO:0030530 C obsolete heterogeneous nuclear ribonucleoprotein complex
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0008143 F poly(A) binding
2879 fdpeP08_F_H23
855bp
chromo3/Bm_scaf102
1187377bp
UniRef50_Q9GU68 (80%/160)
Cluster: Eukaryotic translation initiation factor 5A; n=4; Coelomata|Rep: Eukaryotic translation initiation factor 5A - Drosophila melanogaster (Fruit fly)
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006446 P regulation of translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0019079 P viral genome replication
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0007626 P locomotory behavior
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040035 P hermaphrodite genitalia development
2880 fdpeP08_F_H24
885bp
chromo10/Bm_scaf70
1945803bp
UniRef50_A7KCY9 (40%/66)
Cluster: Ribosomal protein L23a; n=1; Heliconius melpomene|Rep: Ribosomal protein L23a - Heliconius melpomene
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006334 P nucleosome assembly
previous next from show/9984

- SilkBase 1999-2023 -