SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/9984
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
2191 fdpeP06_F_L07
859bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9GZJ8 (98%/163)
Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bombyx mori (Silk moth)
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006302 P double-strand break repair
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0000723 P telomere maintenance
GO:0004518 F nuclease activity
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007001 P chromosome organization
GO:0007126 P meiotic cell cycle
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
2192 fdpeP06_F_L08
926bp
chromo23/Bm_scaf22
5301712bp
UniRef50_Q22SM5 (31%/69)
Cluster: Putative uncharacterized protein; n=1; Tetrahymena thermophila SB210|Rep: Putative uncharacterized protein - Tetrahymena thermophila SB210
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0009254 P peptidoglycan turnover
GO:0019867 C outer membrane
2193 fdpeP06_F_L09
946bp
unknown/
0bp
UniRef50_Q95JC9 (30%/123)
Cluster: Basic proline-rich protein precursor [Contains: Proline-rich peptide SP-A (PRP-SP-A); Proline-rich peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)]; n=10; Eukaryota|Rep: Basic proline-rich protein precursor [Contains: Proline-rich peptide SP-A (PRP-SP-A); Proline-rich peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)] - Sus scrofa (Pig)
GO:0005179 F hormone activity
2194 fdpeP06_F_L10
912bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q6UUU1 (55%/38)
Cluster: Putative uncharacterized protein; n=1; Escherichia coli|Rep: Putative uncharacterized protein - Escherichia coli
GO:0003964 F RNA-directed DNA polymerase activity
2195 fdpeP06_F_L11
894bp
chromo4/Bm_scaf13
6731059bp
UniRef50_O97166 (39%/143)
Cluster: 3-alpha-hydroxysteroid dehydrogenase-like protein; n=1; Branchiostoma floridae|Rep: 3-alpha-hydroxysteroid dehydrogenase-like protein - Branchiostoma floridae (Florida lancelet) (Amphioxus)
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
2196 fdpeP06_F_L12
922bp
unknown/
0bp
UniRef50_Q5QJQ3 (90%/122)
Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium
2197 fdpeP06_F_L13
894bp
chromo23/Bm_scaf31
4559070bp
UniRef50_UPI0000DB7E04 (48%/186)
Cluster: PREDICTED: similar to Rep1 CG8357-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to Rep1 CG8357-PA - Apis mellifera
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0006915 P apoptotic process
GO:0006916 P negative regulation of apoptotic process
2198 fdpeP06_F_L14
903bp
chromo4/Bm_scaf5
8683647bp
UniRef50_UPI000051448E (56%/57)
Cluster: PREDICTED: similar to anaphase promoting complex subunit 13; n=1; Apis mellifera|Rep: PREDICTED: similar to anaphase promoting complex subunit 13 - Apis mellifera
GO:0005634 C nucleus
GO:0006512 P obsolete ubiquitin cycle
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0051301 P cell division
2199 fdpeP06_F_L15
938bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q2UN29 (37%/48)
Cluster: Predicted protein; n=1; Aspergillus oryzae|Rep: Predicted protein - Aspergillus oryzae
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005515 F protein binding
2200 fdpeP06_F_L16
925bp
unknown/
0bp
UniRef50_Q24154 (48%/50)
Cluster: 60S ribosomal protein L29; n=12; Endopterygota|Rep: 60S ribosomal protein L29 - Drosophila melanogaster (Fruit fly)
GO:0003682 F chromatin binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005730 C nucleolus
GO:0005829 C cytosol
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0007566 P embryo implantation
GO:0008201 F heparin binding
2201 fdpeP06_F_L17
960bp
unknown/
0bp
UniRef50_Q4A2U1 (48%/29)
Cluster: Putative membrane protein precursor; n=1; Emiliania huxleyi virus 86|Rep: Putative membrane protein precursor - Emiliania huxleyi virus 86
GO:0004222 F metalloendopeptidase activity
GO:0005199 F structural constituent of cell wall
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
2202 fdpeP06_F_L18
930bp
unknown/
0bp
UniRef50_UPI00015A4FAF (33%/65)
Cluster: UPI00015A4FAF related cluster; n=1; Danio rerio|Rep: UPI00015A4FAF UniRef100 entry - Danio rerio
GO:0003779 F actin binding
GO:0016043 P cellular component organization
GO:0030036 P actin cytoskeleton organization
2203 fdpeP06_F_L19
895bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q1HRR4 (60%/125)
Cluster: Oligosaccharyltransferase gamma subunit; n=4; Culicidae|Rep: Oligosaccharyltransferase gamma subunit - Aedes aegypti (Yellowfever mosquito)
GO:0016740 F transferase activity
GO:0004579 F dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0008250 C oligosaccharyltransferase complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0018279 P protein N-linked glycosylation via asparagine
2204 fdpeP06_F_L20
1068bp
unknown/
0bp
(no hit)
2205 fdpeP06_F_L21
888bp
unknown/Bm_scaf157
326066bp
UniRef50_Q12905 (54%/66)
Cluster: Interleukin enhancer-binding factor 2; n=54; Eumetazoa|Rep: Interleukin enhancer-binding factor 2 - Homo sapiens (Human)
GO:0003677 F DNA binding
GO:0003702 F obsolete RNA polymerase II transcription factor activity
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030528 F obsolete transcription regulator activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0003723 F RNA binding
GO:0005524 F ATP binding
GO:0006955 P immune response
GO:0016740 F transferase activity
2206 fdpeP06_F_L22
910bp
chromo10/Bm_scaf10
7317751bp
UniRef50_Q6FKY2 (32%/74)
Cluster: Similar to sp|P25615 Saccharomyces cerevisiae YCR014c POL4 DNA polymerase; n=1; Candida glabrata|Rep: Similar to sp|P25615 Saccharomyces cerevisiae YCR014c POL4 DNA polymerase - Candida glabrata (Yeast) (Torulopsis glabrata)
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003890 F DNA-directed DNA polymerase activity
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0004872 F signaling receptor activity
2207 fdpeP06_F_L23
905bp
chromo22/Bm_scaf61
2256882bp
UniRef50_A0FUR5 (33%/65)
Cluster: Putative uncharacterized protein precursor; n=1; Burkholderia phymatum STM815|Rep: Putative uncharacterized protein precursor - Burkholderia phymatum STM815
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2208 fdpeP06_F_L24
897bp
unknown/Bm_scaf439
26557bp
(no hit)
2209 fdpeP06_F_M01
1038bp
unknown/
0bp
(no hit)
2210 fdpeP06_F_M02
916bp
chromo8/Bm_scaf51
2786897bp
UniRef50_Q16875 (64%/144)
Cluster: 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (6PF-2-K/Fru- 2,6-P2ASE brain/placenta-type isozyme) (iPFK-2) (Renal carcinoma antigen NY-REN-56) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]; n=143; Deuterostomia|Rep: 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (6PF-2-K/Fru- 2,6-P2ASE brain/placenta-type isozyme) (iPFK-2) (Renal carcinoma antigen NY-REN-56) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)] - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0003873 F 6-phosphofructo-2-kinase activity
GO:0004331 F fructose-2,6-bisphosphate 2-phosphatase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006003 P fructose 2,6-bisphosphate metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
2211 fdpeP06_F_M03
926bp
chromo12/Bm_scaf67
2138634bp
UniRef50_O95807 (56%/159)
Cluster: Transmembrane protein 50A; n=31; Eumetazoa|Rep: Transmembrane protein 50A - Homo sapiens (Human)
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0008150 P biological_process
2212 fdpeP06_F_M04
923bp
unknown/Bm_scaf8782_contig53992
792bp
UniRef50_UPI000065E2E3 (90%/85)
Cluster: Homolog of Homo sapiens "Histone 1, H2ai; n=2; Takifugu rubripes|Rep: Homolog of Homo sapiens "Histone 1, H2ai - Takifugu rubripes
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006334 P nucleosome assembly
GO:0007001 P chromosome organization
GO:0005515 F protein binding
GO:0006325 P chromatin organization
GO:0048015 P phosphatidylinositol-mediated signaling
2213 fdpeP06_F_M05
1115bp
unknown/
0bp
(no hit)
2214 fdpeP06_F_M06
971bp
chromo27/Bm_scaf50
3027839bp
UniRef50_A6R957 (53%/32)
Cluster: Cytokinesis protein sepA; n=1; Ajellomyces capsulatus NAm1|Rep: Cytokinesis protein sepA - Ajellomyces capsulatus NAm1
GO:0003779 F actin binding
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
2215 fdpeP06_F_M07
866bp
unknown/
0bp
UniRef50_P61830 (58%/58)
Cluster: Histone H3; n=877; Eukaryota|Rep: Histone H3 - Saccharomyces cerevisiae (Baker's yeast)
GO:0000786 C nucleosome
GO:0000788 C nucleosome
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006333 P chromatin assembly or disassembly
GO:0006334 P nucleosome assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007001 P chromosome organization
2216 fdpeP06_F_M08
924bp
chromo8/Bm_scaf19
6098939bp
UniRef50_UPI000051A0A1 (56%/113)
Cluster: PREDICTED: similar to CG10082-PA, isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to CG10082-PA, isoform A - Apis mellifera
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016301 F kinase activity
2217 fdpeP06_F_M09
949bp
chromo4/Bm_scaf5
8683647bp
UniRef50_UPI0000E481C4 (52%/73)
Cluster: PREDICTED: similar to KIAA1604 protein; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to KIAA1604 protein - Strongylocentrotus purpuratus
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0016070 P RNA metabolic process
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0000790 C chromatin
GO:0005654 C nucleoplasm
GO:0007369 P gastrulation
GO:0009792 P embryo development ending in birth or egg hatching
GO:0030154 P cell differentiation
GO:0042078 P germ-line stem cell division
GO:0043073 C germ cell nucleus
2218 fdpeP06_F_M10
910bp
unknown/Bm_scaf1362_contig45777
3976bp
UniRef50_Q4FH06 (47%/78)
Cluster: NADH-ubiquinone oxidoreductase chain 4L; n=3; Obtectomera|Rep: NADH-ubiquinone oxidoreductase chain 4L - Samia cynthia ricini (Indian eri silkmoth)
GO:0005739 C mitochondrion
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016491 F oxidoreductase activity
2219 fdpeP06_F_M11
921bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P48596 (80%/160)
Cluster: GTP cyclohydrolase I; n=6; cellular organisms|Rep: GTP cyclohydrolase I - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0003934 F GTP cyclohydrolase I activity
GO:0005737 C cytoplasm
GO:0006727 P ommochrome biosynthetic process
GO:0006729 P tetrahydrobiopterin biosynthetic process
GO:0016787 F hydrolase activity
GO:0019438 P aromatic compound biosynthetic process
GO:0042802 F identical protein binding
GO:0005515 F protein binding
GO:0042416 P dopamine biosynthetic process
GO:0006559 P L-phenylalanine catabolic process
GO:0006809 P nitric oxide biosynthetic process
GO:0042133 P neurotransmitter metabolic process
2220 fdpeP06_F_M12
925bp
unknown/
0bp
UniRef50_Q0UP28 (31%/70)
Cluster: Putative uncharacterized protein; n=1; Phaeosphaeria nodorum|Rep: Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0000166 F nucleotide binding
GO:0009792 P embryo development ending in birth or egg hatching
previous next from show/9984

- SilkBase 1999-2023 -