SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/20736
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
6481 BmNP09_FL5_O01
796bp
chromo24/Bm_scaf107
1152854bp
UniRef50_O60832 (68%/145)
Cluster: H/ACA ribonucleoprotein complex subunit 4; n=78; Eukaryota|Rep: H/ACA ribonucleoprotein complex subunit 4 - Homo sapiens (Human)
GO:0000074 P regulation of cell cycle
GO:0003720 F telomerase activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005697 C telomerase holoenzyme complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0007004 P telomere maintenance via telomerase
GO:0008283 P cell population proliferation
GO:0016439 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0030529 C ribonucleoprotein complex
GO:0031119 P tRNA pseudouridine synthesis
GO:0042254 P ribosome biogenesis
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0005874 C microtubule
GO:0008033 P tRNA processing
6482 BmNP09_FL5_O02
889bp
unknown/
0bp
(no hit)
6483 BmNP09_FL5_O03
802bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (75%/220)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
GO:0000028 P ribosomal small subunit assembly
6484 BmNP09_FL5_O04
797bp
chromo11/Bm_scaf35
4373199bp
UniRef50_P36578 (83%/67)
Cluster: 60S ribosomal protein L4; n=70; Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
6485 BmNP09_FL5_O05
813bp
chromo28/Bm_scaf62
2278642bp
UniRef50_O04892 (60%/126)
Cluster: Cytochrome P450 like_TBP; n=10; Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana tabacum (Common tobacco)
GO:0016491 F oxidoreductase activity
GO:0050381 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
6486 BmNP09_FL5_O06
814bp
chromo24/Bm_scaf107
1152854bp
UniRef50_Q16RN6 (83%/68)
Cluster: Adp,atp carrier protein; n=1; Aedes aegypti|Rep: Adp,atp carrier protein - Aedes aegypti (Yellowfever mosquito)
GO:0005215 F transporter activity
GO:0005488 F binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005471 F ATP:ADP antiporter activity
GO:0005515 F protein binding
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006839 P mitochondrial transport
GO:0006915 P apoptotic process
6487 BmNP09_FL5_O07
977bp
unknown/
0bp
UniRef50_A5B0K8 (34%/61)
Cluster: Putative uncharacterized protein; n=1; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape)
GO:0005179 F hormone activity
6488 BmNP09_FL5_O08
866bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (29%/74)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0042302 F structural constituent of cuticle
6489 BmNP09_FL5_O09
851bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (29%/74)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
6490 BmNP09_FL5_O10
811bp
unknown/
0bp
UniRef50_Q6AW70 (74%/221)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
6491 BmNP09_FL5_O11
862bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/159)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
6492 BmNP09_FL5_O12
828bp
unknown/Bm_scaf791
9086bp
UniRef50_Q5C0F6 (67%/77)
Cluster: Putative uncharacterized protein; n=1; Schistosoma japonicum|Rep: Putative uncharacterized protein - Schistosoma japonicum (Blood fluke)
6493 BmNP09_FL5_O13
786bp
unknown/Bm_scaf12551_contig57761
726bp
UniRef50_Q868Q4 (68%/141)
Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep: Reverse transcriptase - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0004519 F endonuclease activity
6494 BmNP09_FL5_O14
840bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q4S3I6 (33%/66)
Cluster: Chromosome 1 SCAF14749, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 1 SCAF14749, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0030594 F neurotransmitter receptor activity
6495 BmNP09_FL5_O15
816bp
unknown/Bm_scaf7718_contig52928
825bp
UniRef50_A7SUZ6 (68%/74)
Cluster: Predicted protein; n=2; Eukaryota|Rep: Predicted protein - Nematostella vectensis
GO:0004519 F endonuclease activity
6496 BmNP09_FL5_O16
864bp
chromo12/Bm_scaf125
698686bp
UniRef50_A2DC30 (32%/67)
Cluster: Formin Homology 2 Domain containing protein; n=1; Trichomonas vaginalis G3|Rep: Formin Homology 2 Domain containing protein - Trichomonas vaginalis G3
GO:0003779 F actin binding
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0005179 F hormone activity
6497 BmNP09_FL5_O17
718bp
unknown/Bm_scaf27781_contig72991
619bp
UniRef50_A2DKP3 (45%/33)
Cluster: Putative uncharacterized protein; n=5; Trichomonas vaginalis G3|Rep: Putative uncharacterized protein - Trichomonas vaginalis G3
6498 BmNP09_FL5_O18
801bp
chromo20/Bm_scaf79
1594848bp
UniRef50_Q16XY4 (48%/100)
Cluster: Anillin/rhotekin; n=1; Aedes aegypti|Rep: Anillin/rhotekin - Aedes aegypti (Yellowfever mosquito)
6499 BmNP09_FL5_O19
909bp
unknown/
0bp
UniRef50_Q58MX6 (27%/113)
Cluster: Phage tail fiber-like protein; n=1; Cyanophage P-SSM2|Rep: Phage tail fiber-like protein - Cyanophage P-SSM2
GO:0005737 C cytoplasm
GO:0006817 P phosphate ion transport
GO:0000156 F phosphorelay response regulator activity
GO:0000160 P phosphorelay signal transduction system
GO:0006355 P regulation of transcription, DNA-templated
6500 BmNP09_FL5_O20
847bp
unknown/Bm_scaf31869_contig77079
591bp
UniRef50_Q9XXW0 (82%/169)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
6501 BmNP09_FL5_O21
828bp
chromo11/Bm_scaf35
4373199bp
UniRef50_P36578 (65%/221)
Cluster: 60S ribosomal protein L4; n=70; Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005811 C lipid droplet
6502 BmNP09_FL5_O22
809bp
chromo19/Bm_scaf28
4702674bp
UniRef50_Q9HCJ6 (53%/137)
Cluster: Probable oxidoreductase KIAA1576; n=21; Coelomata|Rep: Probable oxidoreductase KIAA1576 - Homo sapiens (Human)
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0008021 C synaptic vesicle
GO:0016021 C integral component of membrane
6503 BmNP09_FL5_O23
866bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (27%/154)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
6504 BmNP09_FL5_O24
815bp
unknown/
0bp
UniRef50_Q6AW71 (84%/176)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
6505 BmNP09_FL5_P01
846bp
chromo24/Bm_scaf107
1152854bp
UniRef50_O60832 (58%/147)
Cluster: H/ACA ribonucleoprotein complex subunit 4; n=78; Eukaryota|Rep: H/ACA ribonucleoprotein complex subunit 4 - Homo sapiens (Human)
GO:0000074 P regulation of cell cycle
GO:0003720 F telomerase activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005697 C telomerase holoenzyme complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0007004 P telomere maintenance via telomerase
GO:0008283 P cell population proliferation
GO:0016439 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0030529 C ribonucleoprotein complex
GO:0031119 P tRNA pseudouridine synthesis
GO:0042254 P ribosome biogenesis
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0005874 C microtubule
GO:0008033 P tRNA processing
6506 BmNP09_FL5_P02
798bp
unknown/Bm_scaf3865_contig49070
1117bp
UniRef50_Q5K671 (100%/94)
Cluster: Reverse transcriptase; n=2; Bombyx mori|Rep: Reverse transcriptase - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008270 F zinc ion binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
6507 BmNP09_FL5_P03
815bp
unknown/Bm_scaf3883_contig49088
1115bp
UniRef50_Q9XXW0 (90%/186)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
6508 BmNP09_FL5_P04
813bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (75%/222)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
GO:0000028 P ribosomal small subunit assembly
6509 BmNP09_FL5_P05
817bp
chromo4/Bm_scaf130
668521bp
UniRef50_P39023 (70%/206)
Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
6510 BmNP09_FL5_P06
821bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (27%/158)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
previous next from show/20736

- SilkBase 1999-2023 -