SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/20736
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
4141 BmNP06_FL5_M13
876bp
unknown/
0bp
UniRef50_Q6AW71 (94%/215)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
4142 BmNP06_FL5_M14
922bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q2XWK6 (33%/114)
Cluster: Nicotinic acetylcholine receptor subunit type G; n=1; Lymnaea stagnalis|Rep: Nicotinic acetylcholine receptor subunit type G - Lymnaea stagnalis (Great pond snail)
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
4143 BmNP06_FL5_M15
898bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (29%/97)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
4144 BmNP06_FL5_M16
820bp
unknown/Bm_scaf17418_contig62628
684bp
UniRef50_Q9XXW0 (52%/38)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0004325 F ferrochelatase activity
GO:0005506 F iron ion binding
GO:0006779 P porphyrin-containing compound biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0016829 F lyase activity
4145 BmNP06_FL5_M17
877bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (27%/184)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
4146 BmNP06_FL5_M18
860bp
unknown/Bm_scaf6271_contig51480
891bp
UniRef50_Q9AVH2 (76%/97)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
4147 BmNP06_FL5_M19
860bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (66%/57)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
4148 BmNP06_FL5_M20
864bp
unknown/
0bp
UniRef50_Q6AW70 (81%/196)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
4149 BmNP06_FL5_M21
852bp
chromo11/Bm_scaf35
4373199bp
UniRef50_P36578 (66%/206)
Cluster: 60S ribosomal protein L4; n=70; Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005811 C lipid droplet
4150 BmNP06_FL5_M22
848bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/169)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
4151 BmNP06_FL5_M23
867bp
unknown/Bm_scaf791
9086bp
UniRef50_A5PLD0 (90%/55)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0016491 F oxidoreductase activity
GO:0050381 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
4152 BmNP06_FL5_M24
887bp
unknown/Bm_scaf12297_contig57507
729bp
UniRef50_Q6UV17 (94%/225)
Cluster: Endonuclease and reverse transcriptase-like protein; n=25; Arthropoda|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
4153 BmNP06_FL5_N01
855bp
unknown/Bm_scaf11288_contig56498
743bp
UniRef50_Q24310 (30%/123)
Cluster: Polyprotein; n=1; Drosophila melanogaster|Rep: Polyprotein - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0003677 F DNA binding
GO:0006310 P DNA recombination
GO:0015074 P DNA integration
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
4154 BmNP06_FL5_N02
866bp
unknown/Bm_scaf791
9086bp
UniRef50_A5PLD0 (90%/55)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0016491 F oxidoreductase activity
GO:0050381 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
4155 BmNP06_FL5_N03
854bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (76%/196)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
4156 BmNP06_FL5_N04
831bp
unknown/Bm_scaf13591_contig58801
715bp
UniRef50_Q24310 (31%/86)
Cluster: Polyprotein; n=1; Drosophila melanogaster|Rep: Polyprotein - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
4157 BmNP06_FL5_N05
880bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (27%/184)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
4158 BmNP06_FL5_N06
904bp
unknown/
0bp
UniRef50_P03038 (86%/94)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
4159 BmNP06_FL5_N07
873bp
unknown/Bm_scaf791
9086bp
UniRef50_A5PLD0 (81%/43)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
4160 BmNP06_FL5_N08
879bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (88%/172)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
4161 BmNP06_FL5_N09
901bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q2XWK6 (32%/67)
Cluster: Nicotinic acetylcholine receptor subunit type G; n=1; Lymnaea stagnalis|Rep: Nicotinic acetylcholine receptor subunit type G - Lymnaea stagnalis (Great pond snail)
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
4162 BmNP06_FL5_N10
838bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (27%/180)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
4163 BmNP06_FL5_N11
863bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (75%/222)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
GO:0000028 P ribosomal small subunit assembly
4164 BmNP06_FL5_N12
877bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/165)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
4165 BmNP06_FL5_N13
873bp
chromo24/Bm_scaf103
1218440bp
UniRef50_O22899 (73%/198)
Cluster: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; n=21; Eukaryota|Rep: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase - Arabidopsis thaliana (Mouse-ear cress)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0000391 P spliceosomal complex disassembly
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0004004 F RNA helicase activity
GO:0005515 F protein binding
GO:0005681 C spliceosomal complex
GO:0005739 C mitochondrion
GO:0006364 P rRNA processing
GO:0008026 F helicase activity
GO:0031202 P RNA splicing, via transesterification reactions
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
4166 BmNP06_FL5_N14
856bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (75%/214)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
GO:0000028 P ribosomal small subunit assembly
4167 BmNP06_FL5_N15
865bp
chromo28/Bm_scaf62
2278642bp
UniRef50_UPI00006A2901 (58%/70)
Cluster: UPI00006A2901 related cluster; n=1; Xenopus tropicalis|Rep: UPI00006A2901 UniRef100 entry - Xenopus tropicalis
4168 BmNP06_FL5_N16
838bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (27%/144)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
GO:0030594 F neurotransmitter receptor activity
4169 BmNP06_FL5_N17
863bp
unknown/Bm_scaf15855_contig61065
695bp
UniRef50_Q868Q4 (60%/176)
Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep: Reverse transcriptase - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
4170 BmNP06_FL5_N18
865bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/168)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
previous next from show/20736

- SilkBase 1999-2023 -