SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/20736
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
3871 BmNP06_FL5_B07
840bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (25%/108)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
GO:0030594 F neurotransmitter receptor activity
3872 BmNP06_FL5_B08
1238bp
unknown/
0bp
UniRef50_A5JUU8 (41%/60)
Cluster: Formin B; n=2; Trypanosoma brucei|Rep: Formin B - Trypanosoma brucei TREU927
GO:0003779 F actin binding
GO:0016043 P cellular component organization
GO:0030036 P actin cytoskeleton organization
3873 BmNP06_FL5_B09
856bp
chromo20/Bm_scaf99
1369550bp
UniRef50_UPI00015B6038 (63%/209)
Cluster: PREDICTED: similar to DEAD box ATP-dependent RNA helicase; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to DEAD box ATP-dependent RNA helicase - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
3874 BmNP06_FL5_B10
881bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q4S3I4 (31%/112)
Cluster: Chromosome 1 SCAF14749, whole genome shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 1 SCAF14749, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
3875 BmNP06_FL5_B11
836bp
unknown/Bm_scaf791
9086bp
UniRef50_Q9AVH2 (69%/107)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
3876 BmNP06_FL5_B12
701bp
unknown/
0bp
UniRef50_A4TTL3 (40%/71)
Cluster: Putative uncharacterized protein; n=2; cellular organisms|Rep: Putative uncharacterized protein - Magnetospirillum gryphiswaldense
GO:0003779 F actin binding
GO:0007049 P cell cycle
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0051301 P cell division
3877 BmNP06_FL5_B13
836bp
unknown/Bm_scaf791
9086bp
UniRef50_A4VF70 (64%/101)
Cluster: Putative uncharacterized protein; n=1; Tetrahymena thermophila SB210|Rep: Putative uncharacterized protein - Tetrahymena thermophila SB210
3878 BmNP06_FL5_B14
811bp
unknown/
0bp
UniRef50_Q54SP2 (40%/49)
Cluster: Actin-binding protein; n=2; Dictyostelium discoideum|Rep: Actin-binding protein - Dictyostelium discoideum AX4
GO:0003700 F DNA-binding transcription factor activity
GO:0003779 F actin binding
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
3879 BmNP06_FL5_B15
858bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/159)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
3880 BmNP06_FL5_B16
859bp
unknown/
0bp
UniRef50_Q6AW70 (65%/239)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0019012 C virion component
3881 BmNP06_FL5_B17
777bp
unknown/
0bp
UniRef50_A0DA74 (38%/50)
Cluster: Chromosome undetermined scaffold_43, whole genome shotgun sequence; n=1; Paramecium tetraurelia|Rep: Chromosome undetermined scaffold_43, whole genome shotgun sequence - Paramecium tetraurelia
GO:0003779 F actin binding
GO:0016043 P cellular component organization
GO:0030036 P actin cytoskeleton organization
3882 BmNP06_FL5_B18
854bp
unknown/
0bp
UniRef50_O44504 (82%/17)
Cluster: Ground-like (Grd related) protein 19; n=2; Caenorhabditis|Rep: Ground-like (Grd related) protein 19 - Caenorhabditis elegans
3883 BmNP06_FL5_B19
832bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (76%/178)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
3884 BmNP06_FL5_B20
874bp
chromo8/Bm_scaf58
2336930bp
UniRef50_Q6NWB3 (86%/190)
Cluster: Splicing factor 3b, subunit 4; n=16; Eumetazoa|Rep: Splicing factor 3b, subunit 4 - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0031202 P RNA splicing, via transesterification reactions
3885 BmNP06_FL5_B21
857bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/150)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
3886 BmNP06_FL5_B22
869bp
chromo20/Bm_scaf99
1369550bp
UniRef50_Q7JQN4 (74%/155)
Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
3887 BmNP06_FL5_B23
890bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q4S3I4 (33%/114)
Cluster: Chromosome 1 SCAF14749, whole genome shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 1 SCAF14749, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
3888 BmNP06_FL5_B24
885bp
chromo4/Bm_scaf130
668521bp
UniRef50_P39023 (68%/190)
Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
3889 BmNP06_FL5_C01
867bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/159)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
3890 BmNP06_FL5_C02
870bp
unknown/Bm_scaf791
9086bp
UniRef50_A4VF70 (62%/113)
Cluster: Putative uncharacterized protein; n=1; Tetrahymena thermophila SB210|Rep: Putative uncharacterized protein - Tetrahymena thermophila SB210
3891 BmNP06_FL5_C03
889bp
unknown/
0bp
UniRef50_P03038 (86%/94)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
3892 BmNP06_FL5_C04
836bp
unknown/Bm_scaf791
9086bp
UniRef50_A5PLD0 (90%/55)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
3893 BmNP06_FL5_C05
888bp
unknown/Bm_scaf791
9086bp
UniRef50_A5PLD0 (86%/46)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
3894 BmNP06_FL5_C06
1339bp
unknown/
0bp
(no hit)
3895 BmNP06_FL5_C07
862bp
unknown/Bm_scaf12973_contig58183
721bp
UniRef50_Q868Q4 (68%/35)
Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep: Reverse transcriptase - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016563 F obsolete transcription activator activity
GO:0042025 C host cell nucleus
GO:0045941 P positive regulation of transcription, DNA-templated
3896 BmNP06_FL5_C08
860bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (76%/196)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
3897 BmNP06_FL5_C09
955bp
unknown/
0bp
UniRef50_P03038 (86%/94)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
3898 BmNP06_FL5_C10
879bp
unknown/
0bp
UniRef50_P03038 (86%/94)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
3899 BmNP06_FL5_C11
1133bp
unknown/
0bp
(no hit)
3900 BmNP06_FL5_C12
1184bp
unknown/
0bp
(no hit)
previous next from show/20736

- SilkBase 1999-2023 -