SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/20736
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
2221 BmNP03_T7_M13
755bp
unknown/
0bp
UniRef50_Q6AW70 (77%/74)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0043565 F sequence-specific DNA binding
GO:0009279 C cell outer membrane
GO:0016020 C membrane
2222 BmNP03_T7_M14
804bp
unknown/
0bp
UniRef50_Q6AW70 (97%/43)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2223 BmNP03_T7_M15
824bp
chromo4/Bm_scaf130
668521bp
UniRef50_P39023 (67%/200)
Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2224 BmNP03_T7_M16
869bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000F1EA7E (34%/41)
Cluster: PREDICTED: similar to LOC495114 protein; n=2; Danio rerio|Rep: PREDICTED: similar to LOC495114 protein - Danio rerio
2225 BmNP03_T7_M17
874bp
chromo12/Bm_scaf125
698686bp
(no hit)
2226 BmNP03_T7_M18
955bp
unknown/
0bp
(no hit)
2227 BmNP03_T7_M19
811bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q010M7 (24%/104)
Cluster: Predicted membrane protein; n=3; Eukaryota|Rep: Predicted membrane protein - Ostreococcus tauri
GO:0005199 F structural constituent of cell wall
GO:0005509 F calcium ion binding
GO:0008158 F hedgehog receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2228 BmNP03_T7_M20
879bp
unknown/
0bp
UniRef50_P03038 (87%/94)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
2229 BmNP03_T7_M21
828bp
chromo4/Bm_scaf130
668521bp
UniRef50_P39023 (69%/178)
Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2230 BmNP03_T7_M22
796bp
unknown/
0bp
UniRef50_Q6AW70 (76%/65)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0009279 C cell outer membrane
GO:0016020 C membrane
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0016563 F obsolete transcription activator activity
GO:0042025 C host cell nucleus
GO:0045941 P positive regulation of transcription, DNA-templated
2231 BmNP03_T7_M23
833bp
chromo10/Bm_scaf70
1945803bp
UniRef50_UPI00015B567B (83%/140)
Cluster: PREDICTED: similar to ribosomal protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ribosomal protein L23Ae - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
2232 BmNP03_T7_M24
1108bp
unknown/
0bp
(no hit)
2233 BmNP03_T7_N01
814bp
unknown/Bm_scaf1157
5752bp
UniRef50_Q9AVH2 (91%/60)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
2234 BmNP03_T7_N02
775bp
unknown/
0bp
UniRef50_Q6AW70 (88%/84)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
2235 BmNP03_T7_N03
814bp
chromo12/Bm_scaf67
2138634bp
UniRef50_UPI00015B63D1 (63%/52)
Cluster: PREDICTED: similar to LD11581p; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to LD11581p - Nasonia vitripennis
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0015910 P long-chain fatty acid import into peroxisome
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
2236 BmNP03_T7_N04
905bp
chromo12/Bm_scaf125
698686bp
(no hit)
2237 BmNP03_T7_N05
831bp
unknown/Bm_scaf1157
5752bp
UniRef50_Q9AVH2 (75%/105)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
2238 BmNP03_T7_N06
823bp
chromo24/Bm_scaf107
1152854bp
UniRef50_O60832 (50%/212)
Cluster: H/ACA ribonucleoprotein complex subunit 4; n=78; Eukaryota|Rep: H/ACA ribonucleoprotein complex subunit 4 - Homo sapiens (Human)
GO:0000074 P regulation of cell cycle
GO:0003720 F telomerase activity
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005697 C telomerase holoenzyme complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0007004 P telomere maintenance via telomerase
GO:0008283 P cell population proliferation
GO:0016439 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0030529 C ribonucleoprotein complex
GO:0031119 P tRNA pseudouridine synthesis
GO:0042254 P ribosome biogenesis
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0005874 C microtubule
2239 BmNP03_T7_N07
807bp
unknown/
0bp
UniRef50_Q6AW70 (95%/47)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0009279 C cell outer membrane
GO:0016020 C membrane
GO:0005381 F iron ion transmembrane transporter activity
GO:0006826 P iron ion transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0030288 C outer membrane-bounded periplasmic space
2240 BmNP03_T7_N08
792bp
chromo11/Bm_scaf35
4373199bp
UniRef50_Q5MGK5 (69%/196)
Cluster: Ribosomal protein 23; n=2; Endopterygota|Rep: Ribosomal protein 23 - Lonomia obliqua (Moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0005811 C lipid droplet
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
2241 BmNP03_T7_N09
1126bp
unknown/
0bp
(no hit)
2242 BmNP03_T7_N10
910bp
chromo12/Bm_scaf125
698686bp
(no hit)
2243 BmNP03_T7_N11
878bp
chromo12/Bm_scaf125
698686bp
UniRef50_A0VRZ0 (35%/59)
Cluster: Putative uncharacterized protein; n=2; Rhodobacteraceae|Rep: Putative uncharacterized protein - Dinoroseobacter shibae DFL 12
2244 BmNP03_T7_N12
840bp
chromo4/Bm_scaf5
8683647bp
UniRef50_O76202 (68%/224)
Cluster: Protein ultraspiracle homolog; n=5; Ditrysia|Rep: Protein ultraspiracle homolog - Choristoneura fumiferana (Spruce budworm)
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004872 F signaling receptor activity
GO:0004879 F nuclear receptor activity
GO:0005496 F steroid binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016439 F pseudouridine synthase activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0004884 F nuclear receptor activity
GO:0005500 F juvenile hormone binding
GO:0005515 F protein binding
GO:0005700 C polytene chromosome
GO:0007298 P border follicle cell migration
GO:0007517 P muscle organ development
GO:0008230 C ecdysone receptor holocomplex
GO:0016322 P neuron remodeling
GO:0030425 C dendrite
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0040034 P regulation of development, heterochronic
GO:0045596 P negative regulation of cell differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045941 P positive regulation of transcription, DNA-templated
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0003706 F obsolete ligand-regulated transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004886 F nuclear receptor activity
2245 BmNP03_T7_N13
842bp
chromo12/Bm_scaf125
698686bp
(no hit)
2246 BmNP03_T7_N14
819bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q55365 (48%/29)
Cluster: Endo-1,4-beta-glucanase; n=1; Synechocystis sp. PCC 6803|Rep: Endo-1,4-beta-glucanase - Synechocystis sp. (strain PCC 6803)
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0030246 F carbohydrate binding
GO:0030247 F polysaccharide binding
2247 BmNP03_T7_N15
904bp
unknown/
0bp
UniRef50_P03038 (85%/81)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
2248 BmNP03_T7_N16
847bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (76%/211)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0003824 F catalytic activity
2249 BmNP03_T7_N17
834bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (76%/142)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
2250 BmNP03_T7_N18
928bp
chromo12/Bm_scaf125
698686bp
(no hit)
previous next from show/20736

- SilkBase 1999-2023 -