SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/20736
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
2161 BmNP03_T7_K01
852bp
unknown/
0bp
UniRef50_P03038 (85%/81)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
2162 BmNP03_T7_K02
792bp
chromo4/Bm_scaf130
668521bp
UniRef50_Q92901 (68%/103)
Cluster: 60S ribosomal protein L3-like; n=44; Bilateria|Rep: 60S ribosomal protein L3-like - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005842 C cytosolic large ribosomal subunit
2163 BmNP03_T7_K03
810bp
chromo8/Bm_scaf76
1642413bp
UniRef50_Q7K237 (67%/175)
Cluster: Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; n=10; Eumetazoa|Rep: Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 - Drosophila melanogaster (Fruit fly)
GO:0000287 F magnesium ion binding
GO:0001525 P angiogenesis
GO:0001822 P kidney development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016263 F glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
2164 BmNP03_T7_K04
776bp
chromo12/Bm_scaf125
698686bp
(no hit)
2165 BmNP03_T7_K05
836bp
chromo12/Bm_scaf125
698686bp
(no hit)
2166 BmNP03_T7_K06
829bp
chromo17/Bm_scaf92
1585222bp
UniRef50_UPI0000D573ED (45%/221)
Cluster: PREDICTED: similar to CG9395-PA; n=3; Endopterygota|Rep: PREDICTED: similar to CG9395-PA - Tribolium castaneum
2167 BmNP03_T7_K07
770bp
chromo11/Bm_scaf35
4373199bp
UniRef50_UPI00015A487B (33%/168)
Cluster: UPI00015A487B related cluster; n=2; Danio rerio|Rep: UPI00015A487B UniRef100 entry - Danio rerio
2168 BmNP03_T7_K08
795bp
chromo11/Bm_scaf35
4373199bp
UniRef50_Q5MGK5 (59%/190)
Cluster: Ribosomal protein 23; n=2; Endopterygota|Rep: Ribosomal protein 23 - Lonomia obliqua (Moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0005811 C lipid droplet
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
2169 BmNP03_T7_K09
806bp
unknown/Bm_scaf32159_contig77369
589bp
UniRef50_Q9XXW0 (73%/176)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0005575 C cellular_component
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2170 BmNP03_T7_K10
831bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000DD805D (44%/45)
Cluster: PREDICTED: hypothetical protein; n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein - Homo sapiens
2171 BmNP03_T7_K11
836bp
chromo4/Bm_scaf130
668521bp
UniRef50_P39023 (74%/163)
Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2172 BmNP03_T7_K12
844bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (38%/160)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0004872 F signaling receptor activity
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
2173 BmNP03_T7_K13
763bp
chromo4/Bm_scaf130
668521bp
UniRef50_P39023 (73%/166)
Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2174 BmNP03_T7_K14
796bp
unknown/
0bp
UniRef50_Q6AW70 (71%/84)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0009279 C cell outer membrane
GO:0016020 C membrane
2175 BmNP03_T7_K15
813bp
chromo12/Bm_scaf125
698686bp
(no hit)
2176 BmNP03_T7_K16
794bp
chromo4/Bm_scaf130
668521bp
UniRef50_Q92901 (69%/107)
Cluster: 60S ribosomal protein L3-like; n=44; Bilateria|Rep: 60S ribosomal protein L3-like - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005842 C cytosolic large ribosomal subunit
2177 BmNP03_T7_K17
834bp
chromo23/Bm_scaf22
5301712bp
UniRef50_UPI0000DB71DB (44%/47)
Cluster: PREDICTED: similar to jumonji domain containing 1B; n=1; Apis mellifera|Rep: PREDICTED: similar to jumonji domain containing 1B - Apis mellifera
2178 BmNP03_T7_K18
824bp
unknown/Bm_scaf1157
5752bp
UniRef50_Q9AVH2 (79%/68)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
2179 BmNP03_T7_K19
761bp
unknown/Bm_scaf1157
5752bp
UniRef50_Q9AVH2 (88%/68)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
2180 BmNP03_T7_K20
784bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (60%/150)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
2181 BmNP03_T7_K21
798bp
chromo8/Bm_scaf76
1642413bp
UniRef50_Q96CW1 (85%/204)
Cluster: AP-2 complex subunit mu-1; n=94; Fungi/Metazoa group|Rep: AP-2 complex subunit mu-1 - Homo sapiens (Human)
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005905 C clathrin-coated pit
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008289 F lipid binding
GO:0008565 F obsolete protein transporter activity
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030131 C clathrin adaptor complex
GO:0030132 C clathrin coat of coated pit
GO:0003674 F molecular_function
GO:0030117 C membrane coat
GO:0030119 C AP-type membrane coat adaptor complex
GO:0030122 C AP-2 adaptor complex
2182 BmNP03_T7_K22
797bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (85%/221)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0003824 F catalytic activity
GO:0000070 P mitotic sister chromatid segregation
GO:0000743 P nuclear migration involved in conjugation with cellular fusion
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005816 C spindle pole body
GO:0005827 C polar microtubule
GO:0005828 C kinetochore microtubule
GO:0005880 C nuclear microtubule
GO:0005881 C cytoplasmic microtubule
GO:0030473 P nuclear migration along microtubule
GO:0045143 P homologous chromosome segregation
2183 BmNP03_T7_K23
845bp
unknown/
0bp
UniRef50_Q6AW70 (89%/55)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
2184 BmNP03_T7_K24
839bp
unknown/Bm_scaf1157
5752bp
UniRef50_Q9AVH2 (67%/46)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2185 BmNP03_T7_L01
870bp
unknown/
0bp
UniRef50_P03038 (85%/81)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
2186 BmNP03_T7_L02
780bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI00015B559A (43%/71)
Cluster: PREDICTED: similar to SD22390p; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to SD22390p - Nasonia vitripennis
2187 BmNP03_T7_L03
899bp
unknown/
0bp
UniRef50_P03038 (87%/94)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
2188 BmNP03_T7_L04
831bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000DD805D (50%/40)
Cluster: PREDICTED: hypothetical protein; n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein - Homo sapiens
2189 BmNP03_T7_L05
843bp
unknown/Bm_scaf1157
5752bp
UniRef50_Q9AVH2 (91%/60)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
2190 BmNP03_T7_L06
828bp
chromo10/Bm_scaf30
4522305bp
UniRef50_Q2F647 (98%/130)
Cluster: Tetraspanin E; n=3; Obtectomera|Rep: Tetraspanin E - Bombyx mori (Silk moth)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
previous next from show/20736

- SilkBase 1999-2023 -