SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/20736
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
2101 BmNP03_T7_H13
769bp
unknown/Bm_scaf15116_contig60326
701bp
UniRef50_Q9XXW0 (52%/138)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0005575 C cellular_component
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
2102 BmNP03_T7_H14
813bp
chromo12/Bm_scaf125
698686bp
(no hit)
2103 BmNP03_T7_H15
815bp
unknown/Bm_scaf15116_contig60326
701bp
UniRef50_Q9XXW0 (55%/180)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0005575 C cellular_component
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2104 BmNP03_T7_H16
827bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (66%/157)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
2105 BmNP03_T7_H17
854bp
chromo12/Bm_scaf125
698686bp
(no hit)
2106 BmNP03_T7_H18
947bp
chromo12/Bm_scaf125
698686bp
(no hit)
2107 BmNP03_T7_H19
822bp
chromo12/Bm_scaf125
698686bp
(no hit)
2108 BmNP03_T7_H20
791bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (53%/231)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
2109 BmNP03_T7_H21
896bp
unknown/
0bp
UniRef50_P03038 (87%/94)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
2110 BmNP03_T7_H22
832bp
chromo21/Bm_scaf116
776962bp
UniRef50_Q9NW64 (52%/123)
Cluster: Pre-mRNA-splicing factor RBM22; n=33; Eumetazoa|Rep: Pre-mRNA-splicing factor RBM22 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
GO:0009792 P embryo development ending in birth or egg hatching
2111 BmNP03_T7_H23
850bp
unknown/Bm_scaf32003_contig77213
591bp
UniRef50_Q868Q4 (76%/30)
Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep: Reverse transcriptase - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0003677 F DNA binding
GO:0005634 C nucleus
2112 BmNP03_T7_H24
872bp
chromo28/Bm_scaf62
2278642bp
UniRef50_A5PLD0 (90%/40)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0016491 F oxidoreductase activity
GO:0050381 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
2113 BmNP03_T7_I01
847bp
unknown/
0bp
(no hit)
2114 BmNP03_T7_I02
803bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (88%/172)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0003824 F catalytic activity
2115 BmNP03_T7_I03
818bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (60%/175)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0004872 F signaling receptor activity
2116 BmNP03_T7_I04
794bp
chromo4/Bm_scaf130
668521bp
UniRef50_P39023 (63%/220)
Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
2117 BmNP03_T7_I05
875bp
chromo12/Bm_scaf125
698686bp
(no hit)
2118 BmNP03_T7_I06
827bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (97%/177)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0003824 F catalytic activity
2119 BmNP03_T7_I07
778bp
unknown/Bm_scaf1157
5752bp
UniRef50_Q9AVH2 (91%/60)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
2120 BmNP03_T7_I08
814bp
chromo12/Bm_scaf125
698686bp
(no hit)
2121 BmNP03_T7_I09
815bp
unknown/Bm_scaf1157
5752bp
UniRef50_Q9AVH2 (68%/89)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
2122 BmNP03_T7_I10
799bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (58%/183)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
2123 BmNP03_T7_I11
846bp
unknown/
0bp
UniRef50_Q6AW70 (81%/96)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0008061 F chitin binding
GO:0043169 F cation binding
2124 BmNP03_T7_I12
824bp
unknown/Bm_scaf1157
5752bp
UniRef50_Q9AVH2 (88%/60)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
2125 BmNP03_T7_I13
777bp
chromo21/Bm_scaf7
8313734bp
UniRef50_Q6NP10 (57%/121)
Cluster: LD13390p; n=7; Eukaryota|Rep: LD13390p - Drosophila melanogaster (Fruit fly)
GO:0006807 P nitrogen compound metabolic process
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0003824 F catalytic activity
GO:0003837 F beta-ureidopropionase activity
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
2126 BmNP03_T7_I14
802bp
chromo12/Bm_scaf125
698686bp
(no hit)
2127 BmNP03_T7_I15
819bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (64%/175)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
2128 BmNP03_T7_I16
800bp
unknown/Bm_scaf37907_contig83117
538bp
UniRef50_Q1L6Q3 (71%/32)
Cluster: Rh-like protein; n=3; Obtectomera|Rep: Rh-like protein - Bombyx mori (Silk moth)
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030001 P metal ion transport
GO:0046873 F metal ion transmembrane transporter activity
2129 BmNP03_T7_I17
871bp
chromo12/Bm_scaf125
698686bp
(no hit)
2130 BmNP03_T7_I18
841bp
unknown/Bm_scaf33448_contig78658
580bp
UniRef50_Q9XXW0 (63%/176)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0005575 C cellular_component
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
previous next from show/20736

- SilkBase 1999-2023 -