SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/20736
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
121 BmNP01_FL5_F01
904bp
unknown/
0bp
UniRef50_P03038 (86%/94)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
122 BmNP01_FL5_F02
1059bp
unknown/
0bp
UniRef50_A5KRM5 (46%/43)
Cluster: Putative uncharacterized protein; n=1; Ruminococcus torques ATCC 27756|Rep: Putative uncharacterized protein - Ruminococcus torques ATCC 27756
GO:0005083 F GTPase regulator activity
GO:0005515 F protein binding
GO:0006461 P protein-containing complex assembly
GO:0008154 P actin polymerization or depolymerization
GO:0015629 C actin cytoskeleton
123 BmNP01_FL5_F03
850bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/159)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
124 BmNP01_FL5_F04
850bp
chromo28/Bm_scaf62
2278642bp
UniRef50_A5PLD0 (86%/43)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0016491 F oxidoreductase activity
GO:0050381 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
125 BmNP01_FL5_F05
901bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/159)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
126 BmNP01_FL5_F06
891bp
chromo4/Bm_scaf130
668521bp
UniRef50_P39023 (77%/116)
Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
127 BmNP01_FL5_F07
896bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q4S3I6 (44%/38)
Cluster: Chromosome 1 SCAF14749, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 1 SCAF14749, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0030594 F neurotransmitter receptor activity
GO:0004872 F signaling receptor activity
GO:0001666 P response to hypoxia
GO:0005892 C acetylcholine-gated channel complex
GO:0007165 P signal transduction
GO:0007268 P chemical synaptic transmission
GO:0007399 P nervous system development
GO:0015464 F acetylcholine receptor activity
GO:0035094 P response to nicotine
128 BmNP01_FL5_F08
852bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (27%/184)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
129 BmNP01_FL5_F09
854bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (27%/180)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
130 BmNP01_FL5_F10
880bp
unknown/
0bp
UniRef50_P03038 (86%/94)
Cluster: Tetracycline repressor protein class A from transposon 1721; n=64; root|Rep: Tetracycline repressor protein class A from transposon 1721 - Escherichia coli
GO:0000287 F magnesium ion binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0006313 P transposition, DNA-mediated
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016481 P negative regulation of transcription, DNA-templated
GO:0016566 F obsolete specific transcriptional repressor activity
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0046677 P response to antibiotic
GO:0046872 F metal ion binding
131 BmNP01_FL5_F11
887bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (76%/195)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
132 BmNP01_FL5_F12
893bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (29%/122)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
133 BmNP01_FL5_F13
775bp
unknown/
0bp
UniRef50_Q6AW71 (67%/37)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
134 BmNP01_FL5_F14
864bp
unknown/Bm_scaf263
52572bp
UniRef50_A7S8J8 (44%/127)
Cluster: Predicted protein; n=2; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
135 BmNP01_FL5_F15
849bp
unknown/Bm_scaf791
9086bp
UniRef50_A5PLD0 (90%/55)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0016491 F oxidoreductase activity
GO:0050381 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
136 BmNP01_FL5_F16
862bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/159)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
137 BmNP01_FL5_F17
940bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/149)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
138 BmNP01_FL5_F18
909bp
unknown/
0bp
(no hit)
139 BmNP01_FL5_F19
862bp
unknown/Bm_scaf6271_contig51480
891bp
UniRef50_Q9AVH2 (72%/61)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
140 BmNP01_FL5_F20
767bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q93329 (43%/39)
Cluster: Putative uncharacterized protein lev-8; n=2; Caenorhabditis|Rep: Putative uncharacterized protein lev-8 - Caenorhabditis elegans
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0002119 P nematode larval development
GO:0004872 F signaling receptor activity
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
141 BmNP01_FL5_F21
841bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (73%/222)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000028 P ribosomal small subunit assembly
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
142 BmNP01_FL5_F22
849bp
unknown/Bm_scaf10168_contig55378
761bp
UniRef50_Q9XXW0 (77%/242)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0005575 C cellular_component
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
143 BmNP01_FL5_F23
936bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (28%/154)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004872 F signaling receptor activity
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
144 BmNP01_FL5_F24
918bp
chromo21/Bm_scaf86
1549195bp
UniRef50_P48809 (84%/102)
Cluster: Heterogeneous nuclear ribonucleoprotein 27C; n=11; Endopterygota|Rep: Heterogeneous nuclear ribonucleoprotein 27C - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007319 P negative regulation of oskar mRNA translation
GO:0030529 C ribonucleoprotein complex
GO:0045451 P pole plasm oskar mRNA localization
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0048027 F mRNA 5'-UTR binding
145 BmNP01_FL5_G01
833bp
unknown/Bm_scaf184
128674bp
UniRef50_P08865 (74%/220)
Cluster: 40S ribosomal protein SA; n=242; Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005055 F laminin receptor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0005887 C integral component of plasma membrane
GO:0006412 P translation
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008305 C integrin complex
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0042274 P ribosomal small subunit biogenesis
GO:0000028 P ribosomal small subunit assembly
146 BmNP01_FL5_G02
849bp
chromo12/Bm_scaf125
698686bp
UniRef50_UPI0000D55EDD (27%/184)
Cluster: PREDICTED: similar to CG11822-PA, isoform A; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11822-PA, isoform A - Tribolium castaneum
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030594 F neurotransmitter receptor activity
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0004872 F signaling receptor activity
147 BmNP01_FL5_G03
858bp
unknown/Bm_scaf791
9086bp
UniRef50_Q9AVH2 (90%/60)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
148 BmNP01_FL5_G04
861bp
unknown/Bm_scaf10689_contig55899
752bp
UniRef50_Q8MY33 (46%/200)
Cluster: Reverse transcriptase; n=9; Obtectomera|Rep: Reverse transcriptase - Papilio xuthus
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
149 BmNP01_FL5_G05
894bp
unknown/Bm_scaf791
9086bp
UniRef50_Q9AVH2 (79%/100)
Cluster: Putative senescence-associated protein; n=4; Eukaryota|Rep: Putative senescence-associated protein - Pisum sativum (Garden pea)
150 BmNP01_FL5_G06
888bp
unknown/Bm_scaf791
9086bp
UniRef50_A5PLD0 (88%/50)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
previous next from show/20736

- SilkBase 1999-2023 -