SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/749
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
451 wdV40569
789bp
chromo17/Bm_scaf92
1585222bp
UniRef50_UPI0000D56C64 (51%/35)
Cluster: PREDICTED: similar to CG5304-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG5304-PA - Tribolium castaneum
452 wdV40573
802bp
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI00015B45BA (47%/44)
Cluster: PREDICTED: similar to ENSANGP00000027469, partial; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000027469, partial - Nasonia vitripennis
GO:0005529 F carbohydrate binding
GO:0005515 F protein binding
453 wdV40574
424bp
chromo21/Bm_scaf74
1923266bp
UniRef50_Q9P6X0 (27%/73)
Cluster: Putative uncharacterized protein 68B2.060; n=1; Neurospora crassa|Rep: Putative uncharacterized protein 68B2.060 - Neurospora crassa
GO:0003677 F DNA binding
GO:0006355 P regulation of transcription, DNA-templated
GO:0000226 P microtubule cytoskeleton organization
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007528 P neuromuscular junction development
GO:0008017 F microtubule binding
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0015630 C microtubule cytoskeleton
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
454 wdV40580
699bp
unknown/Bm_scaf131
685043bp
UniRef50_UPI00015B54C6 (44%/34)
Cluster: PREDICTED: similar to GA16823-PA; n=2; Apocrita|Rep: PREDICTED: similar to GA16823-PA - Nasonia vitripennis
455 wdV40581
386bp
chromo25/Bm_scaf65
2150616bp
UniRef50_P48588 (60%/88)
Cluster: 40S ribosomal protein S25; n=86; Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila melanogaster (Fruit fly)
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
456 wdV40582
701bp
chromo1/Bm_scaf8
8002931bp
UniRef50_A2A246 (98%/69)
Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-box protein - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0006355 P regulation of transcription, DNA-templated
457 wdV40583
761bp
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI00005A4635 (94%/85)
Cluster: PREDICTED: similar to statin-like; n=2; Canis lupus familiaris|Rep: PREDICTED: similar to statin-like - Canis familiaris
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
458 wdV40584
785bp
chromo24/Bm_scaf107
1152854bp
UniRef50_P12236 (89%/84)
Cluster: ADP/ATP translocase 3; n=11; Euteleostomi|Rep: ADP/ATP translocase 3 - Homo sapiens (Human)
GO:0005215 F transporter activity
GO:0005471 F ATP:ADP antiporter activity
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005744 C TIM23 mitochondrial import inner membrane translocase complex
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0006915 P apoptotic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005887 C integral component of plasma membrane
GO:0015207 F adenine transmembrane transporter activity
459 wdV40585
808bp
chromo22/Bm_scaf69
2045043bp
UniRef50_A1ZIK4 (40%/44)
Cluster: Putative uncharacterized protein; n=3; Microscilla marina ATCC 23134|Rep: Putative uncharacterized protein - Microscilla marina ATCC 23134
GO:0006812 P cation transport
GO:0008324 F cation transmembrane transporter activity
GO:0016020 C membrane
460 wdV40586
767bp
chromo13/Bm_scaf1
16203812bp
UniRef50_A5DP20 (38%/44)
Cluster: Putative uncharacterized protein; n=1; Pichia guilliermondii|Rep: Putative uncharacterized protein - Pichia guilliermondii (Yeast) (Candida guilliermondii)
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0005746 C mitochondrial respirasome
GO:0006118 P obsolete electron transport
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0000155 F phosphorelay sensor kinase activity
GO:0000160 P phosphorelay signal transduction system
GO:0004673 F protein histidine kinase activity
GO:0004871 F obsolete signal transducer activity
GO:0005524 F ATP binding
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0018106 P peptidyl-histidine phosphorylation
461 wdV40587
732bp
chromo24/Bm_scaf103
1218440bp
UniRef50_Q05048 (55%/96)
Cluster: Cleavage stimulation factor 50 kDa subunit; n=46; Eumetazoa|Rep: Cleavage stimulation factor 50 kDa subunit - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
462 wdV40588
731bp
chromo8/Bm_scaf51
2786897bp
UniRef50_Q1MRP8 (38%/42)
Cluster: NA; n=1; Lawsonia intracellularis PHE/MN1-00|Rep: NA - Lawsonia intracellularis (strain PHE/MN1-00)
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042626 F ATPase-coupled transmembrane transporter activity
463 wdV40590
678bp
chromo14/Bm_scaf38
4008358bp
UniRef50_O06037 (42%/42)
Cluster: EpsI; n=1; Lactococcus lactis subsp. cremoris|Rep: EpsI - Lactococcus lactis subsp. cremoris (Streptococcus cremoris)
GO:0005525 F GTP binding
GO:0006629 P lipid metabolic process
464 wdV40592
805bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q9GPH3 (62%/83)
Cluster: Activating transcription factor; n=1; Bombyx mori|Rep: Activating transcription factor - Bombyx mori (Silk moth)
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0046983 F protein dimerization activity
GO:0007552 P metamorphosis
GO:0007591 P molting cycle, chitin-based cuticle
GO:0035073 P pupariation
GO:0035074 P pupation
465 wdV40593
797bp
chromo11/Bm_scaf16
6248677bp
UniRef50_UPI0000D55AB0 (61%/86)
Cluster: PREDICTED: similar to Probable ATP-dependent RNA helicase DDX20 (DEAD box protein 20) (DEAD box protein DP 103) (Component of gems 3) (Gemin-3) (Regulator of steroidogenic factor 1) (ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED: similar to Probable ATP-dependent RNA helicase DDX20 (DEAD box protein 20) (DEAD box protein DP 103) (Component of gems 3) (Gemin-3) (Regulator of steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
466 wdV40594
814bp
chromo23/Bm_scaf83
1589841bp
UniRef50_Q8SW57 (40%/44)
Cluster: Putative uncharacterized protein ECU03_0510; n=1; Encephalitozoon cuniculi|Rep: Putative uncharacterized protein ECU03_0510 - Encephalitozoon cuniculi
467 wdV40595
809bp
chromo8/Bm_scaf76
1642413bp
UniRef50_UPI0000D56F07 (88%/27)
Cluster: PREDICTED: similar to CG11183-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG11183-PA - Tribolium castaneum
468 wdV40596
492bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P62263 (80%/76)
Cluster: 40S ribosomal protein S14; n=231; cellular organisms|Rep: 40S ribosomal protein S14 - Homo sapiens (Human)
GO:0000028 P ribosomal small subunit assembly
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030490 P maturation of SSU-rRNA
GO:0030529 C ribonucleoprotein complex
GO:0045892 P negative regulation of transcription, DNA-templated
469 wdV40597
785bp
chromo24/Bm_scaf52
2812387bp
UniRef50_Q4UEU4 (25%/154)
Cluster: Putative uncharacterized protein; n=3; Theileria|Rep: Putative uncharacterized protein - Theileria annulata
470 wdV40598
683bp
chromo11/Bm_scaf16
6248677bp
UniRef50_P19109 (63%/109)
Cluster: ATP-dependent RNA helicase p62; n=9; Eukaryota|Rep: ATP-dependent RNA helicase p62 - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0008026 F helicase activity
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0019730 P antimicrobial humoral response
GO:0031047 P gene silencing by RNA
471 wdV40599
766bp
chromo19/Bm_scaf60
2449460bp
UniRef50_Q99LT6 (54%/162)
Cluster: Eef2 protein; n=26; Eukaryota|Rep: Eef2 protein - Mus musculus (Mouse)
GO:0005525 F GTP binding
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006412 P translation
472 wdV40600
722bp
chromo6/Bm_scaf11
6993210bp
UniRef50_UPI00015B4756 (35%/95)
Cluster: PREDICTED: similar to Rab GTPase-interacting factor golgi membrane protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Rab GTPase-interacting factor golgi membrane protein - Nasonia vitripennis
473 wdV40604
707bp
chromo10/Bm_scaf70
1945803bp
UniRef50_Q5RHG8 (80%/90)
Cluster: Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase; n=23; Coelomata|Rep: Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase - Danio rerio (Zebrafish) (Brachydanio rerio)
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004086 F obsolete carbamoyl-phosphate synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0016597 F amino acid binding
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0019856 P pyrimidine nucleobase biosynthetic process
GO:0000166 F nucleotide binding
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
474 wdV40605
692bp
chromo18/Bm_scaf2
11281751bp
UniRef50_Q5XNP2 (44%/168)
Cluster: Putative translation elongation factor 1 gamma; n=1; Aedes aegypti|Rep: Putative translation elongation factor 1 gamma - Aedes aegypti (Yellowfever mosquito)
GO:0003746 F translation elongation factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
475 wdV40606
261bp
chromo8/Bm_scaf51
2786897bp
UniRef50_P61353 (66%/75)
Cluster: 60S ribosomal protein L27; n=97; Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0005737 C cytoplasm
GO:0005842 C cytosolic large ribosomal subunit
476 wdV40607
691bp
chromo27/Bm_scaf50
3027839bp
UniRef50_P68363 (73%/135)
Cluster: Tubulin alpha-1B chain; n=970; Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
477 wdV40608
746bp
chromo9/Bm_scaf14
6760189bp
UniRef50_Q08V43 (44%/43)
Cluster: Putative uncharacterized protein; n=1; Stigmatella aurantiaca DW4/3-1|Rep: Putative uncharacterized protein - Stigmatella aurantiaca DW4/3-1
478 wdV40609
807bp
chromo14/Bm_scaf38
4008358bp
UniRef50_Q1HQB9 (96%/90)
Cluster: Nucleosome assembly protein isoform 1; n=7; Coelomata|Rep: Nucleosome assembly protein isoform 1 - Bombyx mori (Silk moth)
GO:0005634 C nucleus
GO:0006334 P nucleosome assembly
GO:0005515 F protein binding
GO:0005678 C obsolete chromatin assembly complex
GO:0006260 P DNA replication
GO:0008284 P positive regulation of cell population proliferation
479 wdV40610
678bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q15528 (70%/84)
Cluster: Mediator of RNA polymerase II transcription subunit 22; n=35; Eumetazoa|Rep: Mediator of RNA polymerase II transcription subunit 22 - Homo sapiens (Human)
GO:0000119 C mediator complex
GO:0005515 F protein binding
GO:0005625 C obsolete soluble fraction
GO:0005737 C cytoplasm
480 wdV40611
762bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q06477 (64%/100)
Cluster: IFN-response element binding factor 2; n=3; Murinae|Rep: IFN-response element binding factor 2 - Mus musculus (Mouse)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0016607 C nuclear speck
previous next from show/749

- SilkBase 1999-2023 -