SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/843
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
391 wdV30473X
558bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q2F5L4 (87%/94)
Cluster: Antennal binding protein; n=2; Obtectomera|Rep: Antennal binding protein - Bombyx mori (Silk moth)
GO:0005549 F odorant binding
GO:0006810 P transport
392 wdV30474
443bp
chromo19/Bm_scaf28
4702674bp
(no hit)
393 wdV30475
716bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P10768 (65%/81)
Cluster: S-formylglutathione hydrolase; n=136; cellular organisms|Rep: S-formylglutathione hydrolase - Homo sapiens (Human)
GO:0004091 F carboxylic ester hydrolase activity
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0016023 C cytoplasmic vesicle
GO:0016787 F hydrolase activity
GO:0018738 F S-formylglutathione hydrolase activity
GO:0031410 C cytoplasmic vesicle
394 wdV30476
736bp
chromo22/Bm_scaf108
1018582bp
UniRef50_Q9NFP5 (75%/53)
Cluster: SH3 domain-binding glutamic acid-rich protein homolog; n=94; cellular organisms|Rep: SH3 domain-binding glutamic acid-rich protein homolog - Drosophila melanogaster (Fruit fly)
395 wdV30477
501bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q2F5L4 (100%/84)
Cluster: Antennal binding protein; n=2; Obtectomera|Rep: Antennal binding protein - Bombyx mori (Silk moth)
GO:0005549 F odorant binding
GO:0006810 P transport
396 wdV30478
531bp
chromo23/Bm_scaf83
1589841bp
UniRef50_P61254 (77%/89)
Cluster: 60S ribosomal protein L26; n=96; Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005842 C cytosolic large ribosomal subunit
GO:0006412 P translation
GO:0015934 C large ribosomal subunit
GO:0030529 C ribonucleoprotein complex
397 wdV30479
776bp
chromo9/Bm_scaf14
6760189bp
UniRef50_UPI0000E23955 (58%/163)
Cluster: PREDICTED: similar to heat shock protein 2; n=1; Pan troglodytes|Rep: PREDICTED: similar to heat shock protein 2 - Pan troglodytes
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006950 P response to stress
398 wdV30480
780bp
chromo22/Bm_scaf18
5904300bp
UniRef50_P09622 (72%/74)
Cluster: Dihydrolipoyl dehydrogenase, mitochondrial precursor; n=183; cellular organisms|Rep: Dihydrolipoyl dehydrogenase, mitochondrial precursor - Homo sapiens (Human)
GO:0004148 F dihydrolipoyl dehydrogenase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006091 P generation of precursor metabolites and energy
GO:0006118 P obsolete electron transport
GO:0016491 F oxidoreductase activity
GO:0045454 P cell redox homeostasis
GO:0050660 F flavin adenine dinucleotide binding
399 wdV30481
746bp
unknown/Bm_scaf2543_contig47608
1622bp
UniRef50_Q5MGN8 (76%/80)
Cluster: Heat shock protein 3; n=4; Ditrysia|Rep: Heat shock protein 3 - Lonomia obliqua (Moth)
GO:0006950 P response to stress
400 wdV30483
682bp
chromo24/Bm_scaf194
123494bp
UniRef50_Q8I9N4 (95%/89)
Cluster: Masquerade-like serine proteinase homolog; n=6; Endopterygota|Rep: Masquerade-like serine proteinase homolog - Bombyx mori (Silk moth)
GO:0003824 F catalytic activity
GO:0004252 F serine-type endopeptidase activity
GO:0006508 P proteolysis
GO:0005515 F protein binding
401 wdV30485
624bp
chromo11/Bm_scaf16
6248677bp
UniRef50_O65729 (65%/83)
Cluster: 60S ribosomal protein L18; n=17; Eukaryota|Rep: 60S ribosomal protein L18 - Cicer arietinum (Chickpea) (Garbanzo)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005842 C cytosolic large ribosomal subunit
402 wdV30486X
635bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q71DI3 (95%/82)
Cluster: Histone H3.2; n=3155; Eukaryota|Rep: Histone H3.2 - Homo sapiens (Human)
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006334 P nucleosome assembly
GO:0007001 P chromosome organization
GO:0000788 C nucleosome
GO:0006281 P DNA repair
GO:0006333 P chromatin assembly or disassembly
GO:0006974 P cellular response to DNA damage stimulus
403 wdV30487
737bp
chromo21/Bm_scaf7
8313734bp
UniRef50_Q12VP3 (27%/68)
Cluster: Transmembrane oligosaccharyl transferase; n=1; Methanococcoides burtonii DSM 6242|Rep: Transmembrane oligosaccharyl transferase - Methanococcoides burtonii (strain DSM 6242)
GO:0004576 F oligosaccharyl transferase activity
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0015109 F chromate transmembrane transporter activity
GO:0015703 P chromate transport
404 wdV30488
306bp
chromo5/Bm_scaf20
5834375bp
UniRef50_P36241 (51%/81)
Cluster: 60S ribosomal protein L19; n=141; Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
405 wdV30489
578bp
chromo22/Bm_scaf18
5904300bp
UniRef50_Q25504 (65%/52)
Cluster: Larval cuticle protein 16/17 precursor; n=5; Obtectomera|Rep: Larval cuticle protein 16/17 precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005198 F structural molecule activity
GO:0042302 F structural constituent of cuticle
406 wdV30490
819bp
chromo9/Bm_scaf14
6760189bp
UniRef50_Q6MSU3 (30%/53)
Cluster: Conserved hypothetical transmembrane protein; n=1; Mycoplasma mycoides subsp. mycoides SC|Rep: Conserved hypothetical transmembrane protein - Mycoplasma mycoides subsp. mycoides SC
GO:0016021 C integral component of membrane
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005488 F binding
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
407 wdV30491
746bp
chromo10/Bm_scaf44
3277875bp
UniRef50_P35222 (63%/83)
Cluster: Catenin beta-1; n=64; Bilateria|Rep: Catenin beta-1 - Homo sapiens (Human)
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000904 P cell morphogenesis involved in differentiation
GO:0001501 P skeletal system development
GO:0001569 P branching involved in blood vessel morphogenesis
GO:0001706 P endoderm formation
GO:0001708 P cell fate specification
GO:0001709 P cell fate determination
GO:0001711 P endodermal cell fate commitment
GO:0001837 P epithelial to mesenchymal transition
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004871 F obsolete signal transducer activity
GO:0005198 F structural molecule activity
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005624 C obsolete membrane fraction
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005916 C fascia adherens
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007155 P cell adhesion
GO:0007268 P chemical synaptic transmission
GO:0007398 P ectoderm development
GO:0007507 P heart development
GO:0008022 F protein C-terminus binding
GO:0009950 P dorsal/ventral axis specification
GO:0009953 P dorsal/ventral pattern formation
GO:0009954 P proximal/distal pattern formation
GO:0009987 P cellular process
GO:0010003 P gastrulation with mouth forming second
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016331 P morphogenesis of embryonic epithelium
GO:0016337 P cell-cell adhesion
GO:0030018 C Z disc
GO:0030027 C lamellipodium
GO:0030097 P hemopoiesis
GO:0030154 P cell differentiation
GO:0030316 P osteoclast differentiation
GO:0030324 P lung development
GO:0030521 P androgen receptor signaling pathway
GO:0030858 P positive regulation of epithelial cell differentiation
GO:0030877 C beta-catenin destruction complex
GO:0030900 P forebrain development
GO:0031016 P pancreas development
GO:0031528 C microvillus membrane
GO:0035116 P embryonic hindlimb morphogenesis
GO:0035117 P embryonic forelimb morphogenesis
GO:0042127 P regulation of cell population proliferation
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0042733 P embryonic digit morphogenesis
GO:0045177 C apical part of cell
GO:0045294 F alpha-catenin binding
GO:0045296 F cadherin binding
GO:0045449 P regulation of transcription, DNA-templated
GO:0045453 P bone resorption
GO:0045595 P regulation of cell differentiation
GO:0045596 P negative regulation of cell differentiation
GO:0045667 P regulation of osteoblast differentiation
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045671 P negative regulation of osteoclast differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045941 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048469 P cell maturation
GO:0048489 P synaptic vesicle transport
GO:0048593 P camera-type eye morphogenesis
GO:0050681 F androgen receptor binding
GO:0050808 P synapse organization
GO:0060070 P canonical Wnt signaling pathway
408 wdV30492
833bp
chromo22/Bm_scaf18
5904300bp
UniRef50_Q25504 (64%/75)
Cluster: Larval cuticle protein 16/17 precursor; n=5; Obtectomera|Rep: Larval cuticle protein 16/17 precursor - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0005198 F structural molecule activity
GO:0042302 F structural constituent of cuticle
GO:0005739 C mitochondrion
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008289 F lipid binding
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0045263 C proton-transporting ATP synthase complex, coupling factor F(o)
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
409 wdV30494
741bp
unknown/Bm_scaf580
15464bp
UniRef50_Q16VJ7 (75%/69)
Cluster: Acyl-protein thioesterase 1,2; n=2; Endopterygota|Rep: Acyl-protein thioesterase 1,2 - Aedes aegypti (Yellowfever mosquito)
410 wdV30495
713bp
chromo11/Bm_scaf35
4373199bp
UniRef50_Q9VKV1 (65%/61)
Cluster: CG6206-PA, isoform A; n=9; Endopterygota|Rep: CG6206-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0003824 F catalytic activity
GO:0004559 F alpha-mannosidase activity
GO:0005515 F protein binding
GO:0005975 P carbohydrate metabolic process
GO:0006013 P mannose metabolic process
GO:0015923 F mannosidase activity
GO:0030246 F carbohydrate binding
411 wdV30496
704bp
chromo5/Bm_scaf9
8107424bp
UniRef50_P26373 (60%/76)
Cluster: 60S ribosomal protein L13; n=111; Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005830 C cytosolic ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
412 wdV30497
790bp
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI00015B6099 (52%/88)
Cluster: PREDICTED: similar to Mitochondrial 39S ribosomal protein L3; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 - Nasonia vitripennis
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
413 wdV30498X
415bp
chromo26/Bm_scaf34
4438494bp
UniRef50_A0MNZ0 (95%/20)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0005622 C intracellular anatomical structure
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0000166 F nucleotide binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0016787 F hydrolase activity
414 wdV30499
738bp
chromo19/Bm_scaf60
2449460bp
UniRef50_Q8T8R1 (60%/86)
Cluster: GM14667p; n=8; Neoptera|Rep: GM14667p - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
415 wdV30500
564bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P62266 (93%/65)
Cluster: 40S ribosomal protein S23; n=141; cellular organisms|Rep: 40S ribosomal protein S23 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006450 P regulation of translational fidelity
416 wdV30501
785bp
chromo10/Bm_scaf70
1945803bp
UniRef50_Q2F5X6 (97%/87)
Cluster: Notch-like protein; n=1; Bombyx mori|Rep: Notch-like protein - Bombyx mori (Silk moth)
417 wdV30503
633bp
chromo20/Bm_scaf37
4206046bp
UniRef50_P33514 (80%/95)
Cluster: 40S ribosomal protein S7; n=94; Eukaryota|Rep: 40S ribosomal protein S7 - Anopheles gambiae (African malaria mosquito)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005811 C lipid droplet
418 wdV30504
538bp
chromo11/Bm_scaf35
4373199bp
(no hit)
419 wdV30506
847bp
chromo22/Bm_scaf108
1018582bp
UniRef50_UPI0000519F91 (83%/55)
Cluster: PREDICTED: similar to SH3 domain-binding glutamic acid-rich protein homolog (SH3BGR protein), partial; n=1; Apis mellifera|Rep: PREDICTED: similar to SH3 domain-binding glutamic acid-rich protein homolog (SH3BGR protein), partial - Apis mellifera
420 wdV30508
800bp
chromo6/Bm_scaf111
965032bp
UniRef50_Q08473 (57%/126)
Cluster: RNA-binding protein squid; n=22; Endopterygota|Rep: RNA-binding protein squid - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000785 C chromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0007293 P germarium-derived egg chamber formation
GO:0007297 P ovarian follicle cell migration
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0008298 P intracellular mRNA localization
GO:0009953 P dorsal/ventral pattern formation
GO:0017148 P negative regulation of translation
GO:0019094 P pole plasm mRNA localization
GO:0030529 C ribonucleoprotein complex
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0035062 C omega speckle
previous next from show/843

- SilkBase 1999-2023 -