SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
previous next from show/1587
No. Name
Length
Cromosome No./Scaffold Id
Scaffold Length
BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
871 brP-1246
750bp
chromo4/Bm_scaf13
6731059bp
UniRef50_Q99436 (62%/179)
Cluster: Proteasome subunit beta type-7 precursor; n=44; Fungi/Metazoa group|Rep: Proteasome subunit beta type-7 precursor - Homo sapiens (Human)
GO:0000502 C proteasome complex
GO:0004175 F endopeptidase activity
GO:0004298 F threonine-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005839 C proteasome core complex
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
GO:0043234 C protein-containing complex
872 brP-1247
750bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q05639 (66%/142)
Cluster: Elongation factor 1-alpha 2; n=8397; root|Rep: Elongation factor 1-alpha 2 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
873 brP-1248
750bp
unknown/Bm_scaf8969_contig54179
787bp
UniRef50_Q5F4U6 (38%/36)
Cluster: Serpentine receptor, class h protein 2, isoform b; n=2; Caenorhabditis elegans|Rep: Serpentine receptor, class h protein 2, isoform b - Caenorhabditis elegans
GO:0004872 F signaling receptor activity
874 brP-1346
640bp
chromo3/Bm_scaf55
2715649bp
UniRef50_P34439 (63%/158)
Cluster: Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1; n=2; Caenorhabditis|Rep: Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1 - Caenorhabditis elegans
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0016491 F oxidoreductase activity
GO:0050662 F obsolete coenzyme binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005515 F protein binding
875 brP-1347
700bp
chromo1/Bm_scaf23
5097954bp
UniRef50_Q4Q7G9 (32%/52)
Cluster: GTPase activating protein, putative; n=3; Leishmania|Rep: GTPase activating protein, putative - Leishmania major
GO:0005097 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0032313 P regulation of GTPase activity
876 brP-1348
700bp
chromo19/Bm_scaf36
4352778bp
UniRef50_Q8SXF0 (64%/190)
Cluster: RH44312p; n=5; Diptera|Rep: RH44312p - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0043043 P peptide biosynthetic process
877 brP-1350
700bp
chromo7/Bm_scaf15
6423983bp
UniRef50_P61221 (75%/188)
Cluster: ATP-binding cassette sub-family E member 1; n=112; Eukaryota|Rep: ATP-binding cassette sub-family E member 1 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006118 P obsolete electron transport
GO:0006401 P RNA catabolic process
GO:0008428 F ribonuclease inhibitor activity
GO:0009055 F electron transfer activity
GO:0009615 P response to virus
GO:0016887 F ATP hydrolysis activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0051536 F iron-sulfur cluster binding
878 brP-1351
477bp
chromo10/Bm_scaf70
1945803bp
UniRef50_P62244 (86%/106)
Cluster: 40S ribosomal protein S15a; n=205; Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
879 brP-1352
700bp
chromo12/Bm_scaf125
698686bp
UniRef50_Q61IA9 (32%/58)
Cluster: Putative uncharacterized protein CBG10326; n=2; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG10326 - Caenorhabditis briggsae
880 brP-1355
710bp
chromo23/Bm_scaf12
6701349bp
UniRef50_UPI00015B5843 (36%/44)
Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis
GO:0005739 C mitochondrion
GO:0005978 P glycogen biosynthetic process
GO:0009058 P biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
881 brP-1356
650bp
unknown/Bm_scaf231
69681bp
UniRef50_Q1MNU1 (47%/34)
Cluster: NA; n=1; Lawsonia intracellularis PHE/MN1-00|Rep: NA - Lawsonia intracellularis (strain PHE/MN1-00)
882 brP-1358
700bp
chromo1/Bm_scaf23
5097954bp
UniRef50_UPI0001552FC9 (39%/46)
Cluster: PREDICTED: hypothetical protein; n=1; Mus musculus|Rep: PREDICTED: hypothetical protein - Mus musculus
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045449 P regulation of transcription, DNA-templated
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005515 F protein binding
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0008076 C voltage-gated potassium channel complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030955 F potassium ion binding
GO:0003707 F steroid hormone receptor activity
GO:0004872 F signaling receptor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
883 brP-1361
700bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P63208 (79%/163)
Cluster: S-phase kinase-associated protein 1A; n=94; Eukaryota|Rep: S-phase kinase-associated protein 1A - Homo sapiens (Human)
GO:0005515 F protein binding
GO:0006512 P obsolete ubiquitin cycle
GO:0000074 P regulation of cell cycle
GO:0000917 P division septum assembly
GO:0000920 P septum digestion after cytokinesis
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006974 P cellular response to DNA damage stimulus
GO:0006998 P nuclear envelope organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0019005 C SCF ubiquitin ligase complex
GO:0030163 P protein catabolic process
GO:0045841 P negative regulation of mitotic metaphase/anaphase transition
GO:0051301 P cell division
884 brP-1363
700bp
chromo5/Bm_scaf54
2693215bp
UniRef50_Q7QCJ9 (67%/105)
Cluster: Mediator of RNA polymerase II transcription subunit 27; n=5; Endopterygota|Rep: Mediator of RNA polymerase II transcription subunit 27 - Anopheles gambiae (African malaria mosquito)
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0000119 C mediator complex
GO:0005515 F protein binding
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016455 F transcription coregulator activity
GO:0003713 F transcription coactivator activity
GO:0006367 P transcription initiation from RNA polymerase II promoter
885 brP-1364
650bp
chromo6/Bm_scaf111
965032bp
UniRef50_Q1HPY3 (100%/29)
Cluster: Secreted protein acidic and rich in cysteine; n=4; Neoptera|Rep: Secreted protein acidic and rich in cysteine - Bombyx mori (Silk moth)
GO:0005509 F calcium ion binding
GO:0007498 P mesoderm development
886 brP-1367
650bp
chromo1/Bm_scaf8
8002931bp
UniRef50_Q2YHP1 (83%/24)
Cluster: Monodehydroascorbate reductase; n=1; Plantago major|Rep: Monodehydroascorbate reductase - Plantago major (Common plantain)
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0015662 F P-type ion transporter activity
GO:0016020 C membrane
887 brP-1370
690bp
chromo11/Bm_scaf135
559623bp
UniRef50_Q8IE07 (25%/109)
Cluster: Putative uncharacterized protein Phat128; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein Phat128 - Plasmodium falciparum (isolate 3D7)
GO:0016020 C membrane
888 brP-1371
660bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q8IGG3 (67%/156)
Cluster: RH27395p; n=5; Drosophila melanogaster|Rep: RH27395p - Drosophila melanogaster (Fruit fly)
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0009653 P anatomical structure morphogenesis
GO:0030183 P B cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0046903 P secretion
GO:0046982 F protein heterodimerization activity
GO:0048471 C perinuclear region of cytoplasm
889 brP-1372
700bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q4JSC0 (87%/123)
Cluster: Actin; n=13; Coelomata|Rep: Actin - Anopheles gambiae (African malaria mosquito)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
890 brP-1373
690bp
chromo24/Bm_scaf115
864725bp
UniRef50_Q7KRU8 (55%/117)
Cluster: CG2216-PA, isoform A; n=18; Endopterygota|Rep: CG2216-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005488 F binding
GO:0005515 F protein binding
GO:0006826 P iron ion transport
GO:0006879 P cellular iron ion homeostasis
GO:0008043 C intracellular ferritin complex
GO:0008198 F ferrous iron binding
GO:0008199 F ferric iron binding
GO:0016491 F oxidoreductase activity
GO:0046914 F transition metal ion binding
GO:0004322 F ferroxidase activity
GO:0005506 F iron ion binding
GO:0046872 F metal ion binding
891 brP-1374
700bp
chromo25/Bm_scaf46
3255295bp
UniRef50_A7Q1N2 (34%/70)
Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape)
892 brP-1375
700bp
chromo5/Bm_scaf54
2693215bp
UniRef50_Q9VVA9 (43%/78)
Cluster: CG9715-PA; n=4; melanogaster subgroup|Rep: CG9715-PA - Drosophila melanogaster (Fruit fly)
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
893 brP-1377
720bp
chromo3/Bm_scaf102
1187377bp
UniRef50_Q9GU68 (65%/115)
Cluster: Eukaryotic translation initiation factor 5A; n=4; Coelomata|Rep: Eukaryotic translation initiation factor 5A - Drosophila melanogaster (Fruit fly)
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006446 P regulation of translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0019079 P viral genome replication
894 brP-1378
720bp
chromo19/Bm_scaf36
4352778bp
UniRef50_A0MNZ0 (75%/24)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
895 brP-1380
714bp
chromo7/Bm_scaf15
6423983bp
UniRef50_A5FL37 (25%/126)
Cluster: Putative uncharacterized protein precursor; n=1; Flavobacterium johnsoniae UW101|Rep: Putative uncharacterized protein precursor - Flavobacterium johnsoniae UW101
896 brP-1381
700bp
chromo23/Bm_scaf12
6701349bp
UniRef50_A0MNZ0 (86%/22)
Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
GO:0005576 C extracellular region
GO:0042742 P defense response to bacterium
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
897 brP-1382
393bp
chromo8/Bm_scaf80
1684774bp
(no hit)
898 brP-1385
700bp
chromo17/Bm_scaf21
5628829bp
UniRef50_Q12882 (46%/171)
Cluster: Dihydropyrimidine dehydrogenase [NADP+] precursor; n=70; Eukaryota|Rep: Dihydropyrimidine dehydrogenase [NADP+] precursor - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0004152 F dihydroorotate dehydrogenase activity
GO:0004158 F dihydroorotate oxidase activity
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0006118 P obsolete electron transport
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006212 P uracil catabolic process
GO:0006214 P thymidine catabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0017113 F dihydropyrimidine dehydrogenase (NADP+) activity
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0006222 P UMP biosynthetic process
899 brP-1386
650bp
chromo7/Bm_scaf45
3364234bp
UniRef50_Q2F5W4 (100%/73)
Cluster: Sericotropin; n=4; Ditrysia|Rep: Sericotropin - Bombyx mori (Silk moth)
GO:0005549 F odorant binding
GO:0006810 P transport
900 brP-1388
530bp
chromo1/Bm_scaf23
5097954bp
UniRef50_A4M9B0 (30%/40)
Cluster: Radical SAM domain protein; n=1; Petrotoga mobilis SJ95|Rep: Radical SAM domain protein - Petrotoga mobilis SJ95
GO:0003824 F catalytic activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
previous next from show/1587

- SilkBase 1999-2023 -