SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/1587
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
1081 brP-1744
621bp
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI0000D576D8 (29%/74)
Cluster: PREDICTED: hypothetical protein; n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical protein - Tribolium castaneum
GO:0003824 F catalytic activity
GO:0009236 P cobalamin biosynthetic process
GO:0042242 F cobyrinic acid a,c-diamide synthase activity
1082 brP-1745
751bp
chromo11/Bm_scaf59
2341090bp
UniRef50_Q96B02 (87%/108)
Cluster: Probable ubiquitin-conjugating enzyme E2 W; n=50; Eukaryota|Rep: Probable ubiquitin-conjugating enzyme E2 W - Homo sapiens (Human)
GO:0004842 F ubiquitin-protein transferase activity
GO:0006464 P cellular protein modification process
GO:0006512 P obsolete ubiquitin cycle
GO:0016874 F ligase activity
GO:0019787 F ubiquitin-like protein transferase activity
1083 brP-1746
750bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q05639 (91%/223)
Cluster: Elongation factor 1-alpha 2; n=8397; root|Rep: Elongation factor 1-alpha 2 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
1084 brP-1747
400bp
chromo9/Bm_scaf14
6760189bp
UniRef50_Q4RED6 (39%/46)
Cluster: Chromosome 10 SCAF15123, whole genome shotgun sequence; n=3; Euteleostomi|Rep: Chromosome 10 SCAF15123, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0003824 F catalytic activity
GO:0004356 F glutamate-ammonia ligase activity
GO:0006807 P nitrogen compound metabolic process
1085 brP-1748
750bp
unknown/Bm_scaf203
100807bp
UniRef50_Q9VYV4 (58%/231)
Cluster: CG2446-PA, isoform A; n=8; Endopterygota|Rep: CG2446-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
1086 brP-1749
660bp
chromo28/Bm_scaf29
4724502bp
UniRef50_UPI0000DB6D1B (84%/116)
Cluster: PREDICTED: similar to homer homolog 2; n=2; Apocrita|Rep: PREDICTED: similar to homer homolog 2 - Apis mellifera
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005887 C integral component of plasma membrane
GO:0007206 P phospholipase C-activating G protein-coupled glutamate receptor signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
1087 brP-1750
650bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P11142 (87%/199)
Cluster: Heat shock cognate 71 kDa protein; n=239; Eukaryota|Rep: Heat shock cognate 71 kDa protein - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0006950 P response to stress
GO:0006986 P response to unfolded protein
GO:0009986 C cell surface
GO:0042623 F ATP hydrolysis activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006402 P mRNA catabolic process
GO:0006916 P negative regulation of apoptotic process
GO:0051082 F unfolded protein binding
GO:0005509 F calcium ion binding
GO:0005788 C endoplasmic reticulum lumen
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0006983 P ER overload response
GO:0008303 C caspase complex
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030674 F protein-macromolecule adaptor activity
GO:0043022 F ribosome binding
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0048471 C perinuclear region of cytoplasm
1088 brP-1752
680bp
chromo19/Bm_scaf36
4352778bp
UniRef50_Q8I2N7 (34%/43)
Cluster: Putative uncharacterized protein PFI1335w; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein PFI1335w - Plasmodium falciparum (isolate 3D7)
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0005515 F protein binding
1089 brP-1753
750bp
chromo1/Bm_scaf8
8002931bp
UniRef50_Q92H60 (21%/142)
Cluster: Probable UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; n=11; Rickettsia|Rep: Probable UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase - Rickettsia conorii
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007047 P cell wall organization
GO:0007049 P cell cycle
GO:0008360 P regulation of cell shape
GO:0008766 F UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
GO:0009058 P biosynthetic process
GO:0009252 P peptidoglycan biosynthetic process
GO:0009273 P peptidoglycan-based cell wall biogenesis
GO:0016874 F ligase activity
GO:0047480 F UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
GO:0051301 P cell division
GO:0000070 P mitotic sister chromatid segregation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006996 P organelle organization
GO:0007018 P microtubule-based movement
1090 brP-1754
750bp
unknown/Bm_scaf15411_contig60621
699bp
UniRef50_Q9XXW0 (89%/249)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0005575 C cellular_component
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
1091 brP-1755
700bp
chromo15/Bm_scaf3
9954263bp
UniRef50_Q9VC27 (28%/221)
Cluster: Nicastrin homolog precursor; n=9; Diptera|Rep: Nicastrin homolog precursor - Drosophila melanogaster (Fruit fly)
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007010 P cytoskeleton organization
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0042987 P amyloid precursor protein catabolic process
GO:0043085 P positive regulation of catalytic activity
1092 brP-1756
750bp
chromo26/Bm_scaf98
1322498bp
UniRef50_Q7QB90 (36%/169)
Cluster: ENSANGP00000020356; n=4; Endopterygota|Rep: ENSANGP00000020356 - Anopheles gambiae str. PEST
1093 brP-1757
450bp
chromo9/Bm_scaf14
6760189bp
UniRef50_Q4RED6 (39%/46)
Cluster: Chromosome 10 SCAF15123, whole genome shotgun sequence; n=3; Euteleostomi|Rep: Chromosome 10 SCAF15123, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer)
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0006813 P potassium ion transport
GO:0015079 F potassium ion transmembrane transporter activity
GO:0016020 C membrane
GO:0005085 F guanyl-nucleotide exchange factor activity
1094 brP-1758
750bp
unknown/Bm_scaf26373_contig71583
627bp
UniRef50_Q8ITJ9 (78%/103)
Cluster: Transposase; n=7; Arthropoda|Rep: Transposase - Bombyx mori (Silk moth)
1095 brP-1759
800bp
unknown/Bm_scaf12169_contig57379
730bp
UniRef50_Q9XXW0 (93%/152)
Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
1096 brP-1761
650bp
chromo26/Bm_scaf98
1322498bp
UniRef50_P30048 (68%/172)
Cluster: Thioredoxin-dependent peroxide reductase, mitochondrial precursor; n=45; cellular organisms|Rep: Thioredoxin-dependent peroxide reductase, mitochondrial precursor - Homo sapiens (Human)
GO:0004601 F peroxidase activity
GO:0005739 C mitochondrion
GO:0008385 C IkappaB kinase complex
GO:0008785 F alkyl hydroperoxide reductase activity
GO:0016209 F antioxidant activity
GO:0016491 F oxidoreductase activity
GO:0019901 F protein kinase binding
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051920 F peroxiredoxin activity
GO:0005737 C cytoplasm
GO:0006916 P negative regulation of apoptotic process
GO:0006979 P response to oxidative stress
GO:0008379 F thioredoxin peroxidase activity
GO:0042981 P regulation of apoptotic process
GO:0001501 P skeletal system development
GO:0008283 P cell population proliferation
GO:0007252 P I-kappaB phosphorylation
1097 brP-1762
750bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P11142 (83%/159)
Cluster: Heat shock cognate 71 kDa protein; n=239; Eukaryota|Rep: Heat shock cognate 71 kDa protein - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0006950 P response to stress
GO:0006986 P response to unfolded protein
GO:0009986 C cell surface
GO:0042623 F ATP hydrolysis activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006402 P mRNA catabolic process
GO:0006916 P negative regulation of apoptotic process
GO:0051082 F unfolded protein binding
1098 brP-1763
650bp
chromo5/Bm_scaf20
5834375bp
UniRef50_UPI0000D5737C (67%/161)
Cluster: PREDICTED: similar to RNA binding motif protein 24; n=3; Endopterygota|Rep: PREDICTED: similar to RNA binding motif protein 24 - Tribolium castaneum
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016068 P type I hypersensitivity
GO:0005515 F protein binding
1099 brP-1764
300bp
chromo24/Bm_scaf75
1795045bp
UniRef50_O43395 (53%/78)
Cluster: U4/U6 small nuclear ribonucleoprotein Prp3; n=26; Tetrapoda|Rep: U4/U6 small nuclear ribonucleoprotein Prp3 - Homo sapiens (Human)
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0007601 P visual perception
GO:0008380 P RNA splicing
GO:0031202 P RNA splicing, via transesterification reactions
GO:0050896 P response to stimulus
1100 brP-1765
500bp
chromo25/Bm_scaf46
3255295bp
UniRef50_A7Q1N2 (34%/70)
Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape)
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0007018 P microtubule-based movement
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
1101 brP-1766
750bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P11142 (86%/153)
Cluster: Heat shock cognate 71 kDa protein; n=239; Eukaryota|Rep: Heat shock cognate 71 kDa protein - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0006950 P response to stress
GO:0006986 P response to unfolded protein
GO:0009986 C cell surface
GO:0042623 F ATP hydrolysis activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006402 P mRNA catabolic process
GO:0006916 P negative regulation of apoptotic process
GO:0051082 F unfolded protein binding
1102 brP-1767
700bp
chromo4/Bm_scaf5
8683647bp
UniRef50_Q9VW32 (60%/169)
Cluster: CG8756-PA, isoform A; n=26; Endopterygota|Rep: CG8756-PA, isoform A - Drosophila melanogaster (Fruit fly)
GO:0004099 F chitin deacetylase activity
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006030 P chitin metabolic process
GO:0007424 P open tracheal system development
GO:0008061 F chitin binding
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0035159 P regulation of tube length, open tracheal system
GO:0003824 F catalytic activity
1103 brP-1768
800bp
chromo23/Bm_scaf12
6701349bp
UniRef50_UPI0000D5608A (49%/159)
Cluster: PREDICTED: similar to CG5569-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG5569-PA - Tribolium castaneum
GO:0005515 F protein binding
GO:0005634 C nucleus
1104 brP-1770
414bp
chromo1/Bm_scaf23
5097954bp
UniRef50_P49630 (58%/110)
Cluster: 60S ribosomal protein L36 (Protein minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein L36 (Protein minute(1)1B) - Drosophila melanogaster (Fruit fly)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0005730 C nucleolus
GO:0005842 C cytosolic large ribosomal subunit
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0005515 F protein binding
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
1105 brP-1771
750bp
chromo4/Bm_scaf13
6731059bp
UniRef50_UPI0000D56390 (71%/157)
Cluster: PREDICTED: similar to CG5545-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG5545-PA - Tribolium castaneum
GO:0005634 C nucleus
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
GO:0005515 F protein binding
1106 brP-1772
700bp
chromo19/Bm_scaf28
4702674bp
UniRef50_Q9UK73 (59%/193)
Cluster: Protein Fem-1 homolog b; n=39; cellular organisms|Rep: Protein Fem-1 homolog b - Homo sapiens (Human)
GO:0004872 F signaling receptor activity
GO:0005123 F death receptor binding
GO:0005575 C cellular_component
GO:0006917 P apoptotic process
1107 brP-1773
770bp
chromo7/Bm_scaf90
1464009bp
UniRef50_UPI0000F2B488 (46%/43)
Cluster: PREDICTED: hypothetical protein; n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical protein - Monodelphis domestica
GO:0006805 P xenobiotic metabolic process
GO:0006952 P defense response
GO:0042742 P defense response to bacterium
GO:0050832 P defense response to fungus
GO:0003677 F DNA binding
GO:0004519 F endonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0006281 P DNA repair
GO:0016829 F lyase activity
1108 brP-1775
700bp
chromo12/Bm_scaf110
1013275bp
UniRef50_Q4H1F4 (52%/36)
Cluster: Myosin 13; n=2; Tetrahymena thermophila|Rep: Myosin 13 - Tetrahymena thermophila
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005524 F ATP binding
GO:0016459 C myosin complex
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1109 brP-1776
800bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q402D4 (93%/245)
Cluster: Putative uncharacterized protein brP2095; n=1; Bombyx mori|Rep: Putative uncharacterized protein brP2095 - Bombyx mori (Silk moth)
1110 brP-1777
750bp
chromo22/Bm_scaf93
1546200bp
UniRef50_Q4EAG8 (37%/35)
Cluster: Putative uncharacterized protein; n=1; Wolbachia endosymbiont of Drosophila ananassae|Rep: Putative uncharacterized protein - Wolbachia endosymbiont of Drosophila ananassae
GO:0003676 F nucleic acid binding
previous next from show/1587

- SilkBase 1999-2023 -