SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/684
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
361 NV060454.seq
308bp
chromo12/Bm_scaf6
8265254bp
UniRef50_Q969Q0 (48%/64)
Cluster: 60S ribosomal protein L36a-like; n=88; Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo sapiens (Human)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0008150 P biological_process
362 NV060455.seq
672bp
unknown/Bm_scaf596_contig43917
13262bp
UniRef50_UPI000051A69F (62%/27)
Cluster: PREDICTED: similar to ring finger protein 126; n=1; Apis mellifera|Rep: PREDICTED: similar to ring finger protein 126 - Apis mellifera
363 NV060458.seq
681bp
chromo22/Bm_scaf108
1018582bp
UniRef50_Q9Y265 (83%/138)
Cluster: RuvB-like 1; n=91; Eukaryota|Rep: RuvB-like 1 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0001558 P regulation of cell growth
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006310 P DNA recombination
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0017111 F nucleoside-triphosphatase activity
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0051301 P cell division
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
364 NV060459.seq
684bp
chromo7/Bm_scaf90
1464009bp
UniRef50_Q9VNE2 (72%/84)
Cluster: Protein extra bases; n=13; Neoptera|Rep: Protein extra bases - Drosophila melanogaster (Fruit fly)
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0006446 P regulation of translational initiation
GO:0007616 P long-term memory
GO:0005737 C cytoplasm
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
365 NV060460.seq
681bp
chromo5/Bm_scaf9
8107424bp
UniRef50_P60228 (33%/195)
Cluster: Eukaryotic translation initiation factor 3 subunit 6; n=26; Coelomata|Rep: Eukaryotic translation initiation factor 3 subunit 6 - Homo sapiens (Human)
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006412 P translation
GO:0006446 P regulation of translational initiation
GO:0000003 P reproduction
GO:0002119 P nematode larval development
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040035 P hermaphrodite genitalia development
366 NV060461.seq
554bp
chromo9/Bm_scaf14
6760189bp
UniRef50_Q9NR31 (55%/101)
Cluster: GTP-binding protein SAR1a; n=99; Fungi/Metazoa group|Rep: GTP-binding protein SAR1a - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030127 C COPII vesicle coat
GO:0031410 C cytoplasmic vesicle
367 NV060462.seq
558bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q96483 (96%/101)
Cluster: Actin-51; n=584; Eukaryota|Rep: Actin-51 - Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
GO:0000166 F nucleotide binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
368 NV060463.seq
671bp
chromo6/Bm_scaf11
6993210bp
UniRef50_Q9NSD9 (52%/80)
Cluster: Phenylalanyl-tRNA synthetase beta chain; n=47; Eukaryota|Rep: Phenylalanyl-tRNA synthetase beta chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004826 F phenylalanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005625 C obsolete soluble fraction
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006432 P phenylalanyl-tRNA aminoacylation
GO:0016874 F ligase activity
369 NV060464.seq
684bp
chromo1/Bm_scaf8
8002931bp
UniRef50_UPI00003C0513 (40%/124)
Cluster: PREDICTED: similar to CG32372-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG32372-PA - Apis mellifera
GO:0005515 F protein binding
370 NV060465.seq
662bp
unknown/Bm_scaf129
619611bp
UniRef50_UPI00015B56BA (58%/100)
Cluster: PREDICTED: similar to ENSANGP00000013956; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000013956 - Nasonia vitripennis
371 NV060468.seq
686bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q8C671 (78%/60)
Cluster: 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833401I21 product:splicing factor, arginine/serine-rich 2 (SC- 35), full insert sequence; n=7; Mammalia|Rep: 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833401I21 product:splicing factor, arginine/serine-rich 2 (SC- 35), full insert sequence - Mus musculus (Mouse)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0016607 C nuclear speck
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0008380 P RNA splicing
372 NV060470.seq
677bp
unknown/Bm_scaf612
17203bp
UniRef50_Q00325 (60%/138)
Cluster: Phosphate carrier protein, mitochondrial precursor; n=90; Eukaryota|Rep: Phosphate carrier protein, mitochondrial precursor - Homo sapiens (Human)
GO:0005488 F binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005887 C integral component of plasma membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006810 P transport
GO:0015293 F symporter activity
GO:0015320 F phosphate:proton symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0005215 F transporter activity
GO:0009536 C plastid
373 NV060471.seq
681bp
chromo8/Bm_scaf51
2786897bp
UniRef50_Q9Y2P8 (59%/67)
Cluster: RNA 3'-terminal phosphate cyclase-like protein; n=42; Eumetazoa|Rep: RNA 3'-terminal phosphate cyclase-like protein - Homo sapiens (Human)
GO:0003824 F catalytic activity
GO:0003963 F RNA-3'-phosphate cyclase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
374 NV060472.seq
610bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P11142 (76%/88)
Cluster: Heat shock cognate 71 kDa protein; n=239; Eukaryota|Rep: Heat shock cognate 71 kDa protein - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0006950 P response to stress
GO:0006986 P response to unfolded protein
GO:0009986 C cell surface
GO:0042623 F ATP hydrolysis activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006402 P mRNA catabolic process
GO:0006916 P negative regulation of apoptotic process
GO:0051082 F unfolded protein binding
375 NV060473.seq
428bp
chromo15/Bm_scaf3
9954263bp
UniRef50_P62266 (84%/66)
Cluster: 40S ribosomal protein S23; n=141; cellular organisms|Rep: 40S ribosomal protein S23 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0005843 C cytosolic small ribosomal subunit
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0000723 P telomere maintenance
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006450 P regulation of translational fidelity
376 NV060474.seq
686bp
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI0000DB70D1 (63%/76)
Cluster: PREDICTED: similar to Karyopherin 3 CG1059-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to Karyopherin 3 CG1059-PA - Apis mellifera
GO:0005488 F binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0015031 P protein transport
GO:0000003 P reproduction
GO:0000059 P obsolete protein import into nucleus, docking
GO:0001703 P gastrulation with mouth forming first
GO:0002119 P nematode larval development
GO:0005515 F protein binding
GO:0005643 C nuclear pore
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0009790 P embryo development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0040007 P growth
GO:0040010 P positive regulation of growth rate
377 NV060475.seq
646bp
unknown/Bm_scaf171
185819bp
UniRef50_P62495 (83%/83)
Cluster: Eukaryotic peptide chain release factor subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide chain release factor subunit 1 - Homo sapiens (Human)
GO:0003723 F RNA binding
GO:0003747 F translation release factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006415 P translational termination
GO:0006449 P regulation of translational termination
GO:0008079 F translation termination factor activity
GO:0016149 F translation release factor activity, codon specific
GO:0043022 F ribosome binding
378 NV060476.seq
587bp
chromo3/Bm_scaf55
2715649bp
UniRef50_Q9VMT1 (72%/85)
Cluster: CG14026-PC, isoform C; n=15; Protostomia|Rep: CG14026-PC, isoform C - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0001745 P compound eye morphogenesis
GO:0001763 P morphogenesis of a branching structure
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004675 F transmembrane receptor protein serine/threonine kinase activity
GO:0005024 F transforming growth factor beta-activated receptor activity
GO:0005025 F transforming growth factor beta receptor activity, type I
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007181 P transforming growth factor beta receptor complex assembly
GO:0007391 P dorsal closure
GO:0007424 P open tracheal system development
GO:0007448 P anterior/posterior pattern specification, imaginal disc
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007507 P heart development
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016740 F transferase activity
GO:0030509 P BMP signaling pathway
GO:0030707 P ovarian follicle cell development
GO:0030718 P germ-line stem cell population maintenance
GO:0035215 P genital disc development
GO:0042078 P germ-line stem cell division
GO:0045570 P regulation of imaginal disc growth
GO:0045705 P negative regulation of salivary gland boundary specification
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0050431 F transforming growth factor beta binding
GO:0000287 F magnesium ion binding
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0007178 P transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0016021 C integral component of membrane
GO:0030145 F manganese ion binding
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
379 NV060478.seq
684bp
chromo23/Bm_scaf22
5301712bp
UniRef50_Q5KI41 (43%/44)
Cluster: Nucleolar protein, putative; n=1; Filobasidiella neoformans|Rep: Nucleolar protein, putative - Cryptococcus neoformans (Filobasidiella neoformans)
GO:0000786 C nucleosome
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006334 P nucleosome assembly
380 NV060479.seq
682bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q16KW3 (66%/45)
Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito)
GO:0000166 F nucleotide binding
GO:0005525 F GTP binding
GO:0007264 P small GTPase mediated signal transduction
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
GO:0016020 C membrane
381 NV060481.seq
578bp
chromo23/Bm_scaf12
6701349bp
UniRef50_Q9WR81 (98%/76)
Cluster: Polyprotein; n=31; root|Rep: Polyprotein - Bovine viral diarrhea virus 2 (BVDV-2)
GO:0004252 F serine-type endopeptidase activity
GO:0006464 P cellular protein modification process
GO:0006508 P proteolysis
GO:0016032 P viral process
GO:0019082 P viral protein processing
382 NV060483.seq
684bp
unknown/
0bp
UniRef50_P11042 (57%/135)
Cluster: Early 39 kDa protein; n=5; Nucleopolyhedrovirus|Rep: Early 39 kDa protein - Autographa californica nuclear polyhedrosis virus (AcMNPV)
383 NV060484.seq
521bp
chromo21/Bm_scaf7
8313734bp
UniRef50_Q179W1 (70%/65)
Cluster: Protein-tyrosine phosphatase n9; n=1; Aedes aegypti|Rep: Protein-tyrosine phosphatase n9 - Aedes aegypti (Yellowfever mosquito)
GO:0004725 F protein tyrosine phosphatase activity
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
384 NV060485.seq
686bp
chromo12/Bm_scaf84
1632705bp
UniRef50_P50991 (52%/143)
Cluster: T-complex protein 1 subunit delta; n=138; Eukaryota|Rep: T-complex protein 1 subunit delta - Homo sapiens (Human)
GO:0000074 P regulation of cell cycle
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0044267 P cellular protein metabolic process
GO:0051082 F unfolded protein binding
385 NV060486.seq
684bp
chromo1/Bm_scaf8
8002931bp
UniRef50_O75390 (44%/144)
Cluster: Citrate synthase, mitochondrial precursor; n=140; cellular organisms|Rep: Citrate synthase, mitochondrial precursor - Homo sapiens (Human)
GO:0004108 F citrate (Si)-synthase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005975 P carbohydrate metabolic process
GO:0006099 P tricarboxylic acid cycle
GO:0016740 F transferase activity
GO:0046912 F acyltransferase, acyl groups converted into alkyl on transfer
386 NV060487.seq
683bp
chromo5/Bm_scaf54
2693215bp
UniRef50_Q9W3W4 (78%/42)
Cluster: CG14437-PA; n=3; Sophophora|Rep: CG14437-PA - Drosophila melanogaster (Fruit fly)
GO:0005515 F protein binding
GO:0006744 P ubiquinone biosynthetic process
GO:0016491 F oxidoreductase activity
GO:0019538 P protein metabolic process
GO:0046914 F transition metal ion binding
387 NV060488.seq
686bp
chromo11/Bm_scaf59
2341090bp
UniRef50_Q965R0 (60%/83)
Cluster: Putative uncharacterized protein Y50D4C.2; n=1; Caenorhabditis elegans|Rep: Putative uncharacterized protein Y50D4C.2 - Caenorhabditis elegans
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
388 NV060489.seq
685bp
chromo11/Bm_scaf24
5118123bp
UniRef50_Q17MF2 (71%/56)
Cluster: Heat shock protein, putative; n=3; Eukaryota|Rep: Heat shock protein, putative - Aedes aegypti (Yellowfever mosquito)
GO:0005524 F ATP binding
GO:0006457 P protein folding
GO:0006950 P response to stress
389 NV060490.seq
686bp
chromo15/Bm_scaf42
3822572bp
UniRef50_UPI0000DB70D1 (53%/78)
Cluster: PREDICTED: similar to Karyopherin 3 CG1059-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to Karyopherin 3 CG1059-PA - Apis mellifera
GO:0005488 F binding
390 NV060491.seq
684bp
unknown/
0bp
UniRef50_P41434 (95%/85)
Cluster: Uncharacterized 54.7 kDa protein in IAP1-SOD intergenic region; n=13; Nucleopolyhedrovirus|Rep: Uncharacterized 54.7 kDa protein in IAP1-SOD intergenic region - Autographa californica nuclear polyhedrosis virus (AcMNPV)
previous next from show/684

- SilkBase 1999-2023 -