SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/558
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
421 NV021824
826bp
chromo4/Bm_scaf13
6731059bp
UniRef50_P38919 (74%/85)
Cluster: Eukaryotic initiation factor 4A-III; n=366; root|Rep: Eukaryotic initiation factor 4A-III - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0003743 F translation initiation factor activity
GO:0006412 P translation
GO:0006446 P regulation of translational initiation
GO:0016281 C eukaryotic translation initiation factor 4F complex
422 NV021825
699bp
unknown/Bm_scaf612
17203bp
UniRef50_Q00325 (73%/84)
Cluster: Phosphate carrier protein, mitochondrial precursor; n=90; Eukaryota|Rep: Phosphate carrier protein, mitochondrial precursor - Homo sapiens (Human)
GO:0005488 F binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005887 C integral component of plasma membrane
GO:0006091 P generation of precursor metabolites and energy
GO:0006810 P transport
GO:0015293 F symporter activity
GO:0015320 F phosphate:proton symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
423 NV021826
837bp
unknown/Bm_scaf791
9086bp
UniRef50_A5PLD0 (90%/55)
Cluster: Zgc:165536 protein; n=12; Fungi/Metazoa group|Rep: Zgc:165536 protein - Danio rerio (Zebrafish) (Brachydanio rerio)
424 NV021827
697bp
chromo1/Bm_scaf8
8002931bp
UniRef50_Q3ZTR5 (89%/55)
Cluster: Clock; n=2; Endopterygota|Rep: Clock - Danaus plexippus (Monarch)
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004871 F obsolete signal transducer activity
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0030528 F obsolete transcription regulator activity
GO:0045449 P regulation of transcription, DNA-templated
425 NV021829
771bp
chromo11/Bm_scaf24
5118123bp
UniRef50_UPI000024BDBF (37%/40)
Cluster: PREDICTED: hypothetical protein; n=1; Danio rerio|Rep: PREDICTED: hypothetical protein - Danio rerio
GO:0004672 F protein kinase activity
GO:0005097 F GTPase activator activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006468 P protein phosphorylation
GO:0032313 P regulation of GTPase activity
426 NV021830
827bp
chromo3/Bm_scaf102
1187377bp
UniRef50_Q9GU68 (79%/84)
Cluster: Eukaryotic translation initiation factor 5A; n=4; Coelomata|Rep: Eukaryotic translation initiation factor 5A - Drosophila melanogaster (Fruit fly)
GO:0003743 F translation initiation factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0035071 P salivary gland cell autophagic cell death
GO:0048102 P autophagic cell death
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006446 P regulation of translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0019079 P viral genome replication
427 NV021831
778bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q1HQ76 (97%/84)
Cluster: RAN binding protein; n=2; Endopterygota|Rep: RAN binding protein - Bombyx mori (Silk moth)
GO:0046907 P intracellular transport
428 NV021832
842bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q8IGG3 (73%/83)
Cluster: RH27395p; n=5; Drosophila melanogaster|Rep: RH27395p - Drosophila melanogaster (Fruit fly)
429 NV021833
845bp
chromo12/Bm_scaf6
8265254bp
UniRef50_UPI0000D5574C (53%/93)
Cluster: PREDICTED: similar to CG13922-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG13922-PA - Tribolium castaneum
GO:0005515 F protein binding
GO:0016787 F hydrolase activity
430 NV021834
828bp
chromo20/Bm_scaf96
1469819bp
UniRef50_P04350 (85%/191)
Cluster: Tubulin beta-4 chain; n=4602; root|Rep: Tubulin beta-4 chain - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0000212 P meiotic spindle organization
GO:0002119 P nematode larval development
GO:0005737 C cytoplasm
GO:0007051 P spindle organization
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
431 NV021835
831bp
chromo23/Bm_scaf22
5301712bp
UniRef50_UPI0000DB7B98 (80%/86)
Cluster: PREDICTED: similar to asparagine synthetase; n=1; Apis mellifera|Rep: PREDICTED: similar to asparagine synthetase - Apis mellifera
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0005625 C obsolete soluble fraction
GO:0006529 P asparagine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0016874 F ligase activity
432 NV021836
802bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q8MZI3 (83%/84)
Cluster: GH10652p; n=2; Drosophila melanogaster|Rep: GH10652p - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0016246 P RNA interference
GO:0019730 P antimicrobial humoral response
GO:0031047 P gene silencing by RNA
433 NV021837
831bp
chromo11/Bm_scaf16
6248677bp
UniRef50_Q8MZI3 (72%/105)
Cluster: GH10652p; n=2; Drosophila melanogaster|Rep: GH10652p - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006417 P regulation of translation
GO:0016246 P RNA interference
GO:0019730 P antimicrobial humoral response
GO:0031047 P gene silencing by RNA
434 NV021839
831bp
chromo6/Bm_scaf11
6993210bp
UniRef50_Q6IE02 (98%/83)
Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Rep: Mod(Mdg4)-heS00531 - Bombyx mori (Silk moth)
GO:0005515 F protein binding
435 NV021840X
449bp
chromo17/Bm_scaf21
5628829bp
UniRef50_Q0KHU0 (67%/65)
Cluster: CG2174-PB, isoform B; n=3; Drosophila melanogaster|Rep: CG2174-PB, isoform B - Drosophila melanogaster (Fruit fly)
GO:0003774 F cytoskeletal motor activity
GO:0005524 F ATP binding
GO:0005856 C cytoskeleton
GO:0016459 C myosin complex
GO:0005622 C intracellular anatomical structure
GO:0007165 P signal transduction
436 NV021841
810bp
chromo11/Bm_scaf35
4373199bp
UniRef50_Q932P2 (24%/82)
Cluster: Putative uncharacterized protein traA; n=2; Staphylococcus|Rep: Putative uncharacterized protein traA - Staphylococcus aureus (strain Mu50 / ATCC 700699)
GO:0009291 P unidirectional conjugation
GO:0005515 F protein binding
437 NV021842
841bp
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI0000D5674A (37%/91)
Cluster: PREDICTED: similar to CG5904-PA; n=1; Tribolium castaneum|Rep: PREDICTED: similar to CG5904-PA - Tribolium castaneum
438 NV021843
825bp
chromo12/Bm_scaf84
1632705bp
UniRef50_A7BJS4 (98%/105)
Cluster: Aubergine; n=4; Endopterygota|Rep: Aubergine - Bombyx mori (Silk moth)
GO:0003676 F nucleic acid binding
GO:0001556 P oocyte maturation
GO:0005737 C cytoplasm
GO:0006342 P heterochromatin assembly
GO:0007279 P pole cell formation
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007318 P pole plasm protein localization
GO:0016246 P RNA interference
GO:0018994 C P granule
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0030717 P oocyte karyosome formation
GO:0046011 P regulation of oskar mRNA translation
GO:0046012 P positive regulation of oskar mRNA translation
GO:0046594 P maintenance of pole plasm mRNA location
GO:0046843 P dorsal appendage formation
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0005515 F protein binding
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
439 NV021844
730bp
chromo24/Bm_scaf43
3469235bp
UniRef50_Q14697 (58%/72)
Cluster: Neutral alpha-glucosidase AB precursor; n=49; Euteleostomi|Rep: Neutral alpha-glucosidase AB precursor - Homo sapiens (Human)
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0016787 F hydrolase activity
440 NV021845
693bp
chromo25/Bm_scaf32
4385969bp
UniRef50_P28668 (48%/79)
Cluster: Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)]; n=14; Eukaryota|Rep: Bifunctional aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase); Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase)] - Drosophila melanogaster (Fruit fly)
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004818 F glutamate-tRNA ligase activity
GO:0004827 F proline-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006424 P glutamyl-tRNA aminoacylation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016874 F ligase activity
441 NV021846
804bp
chromo3/Bm_scaf63
2158332bp
UniRef50_P46429 (69%/68)
Cluster: Glutathione S-transferase 2; n=6; Ditrysia|Rep: Glutathione S-transferase 2 - Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
GO:0004364 F glutathione transferase activity
GO:0016740 F transferase activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
442 NV021847
806bp
chromo5/Bm_scaf20
5834375bp
UniRef50_Q93839 (67%/83)
Cluster: Putative uncharacterized protein; n=2; Caenorhabditis|Rep: Putative uncharacterized protein - Caenorhabditis elegans
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006118 P obsolete electron transport
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 F flavin adenine dinucleotide binding
443 NV021848
770bp
chromo3/Bm_scaf17
6395444bp
UniRef50_Q179C5 (54%/87)
Cluster: Retinaldehyde binding protein; n=2; Culicidae|Rep: Retinaldehyde binding protein - Aedes aegypti (Yellowfever mosquito)
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
444 NV021849
794bp
chromo1/Bm_scaf8
8002931bp
UniRef50_UPI00015B6425 (44%/197)
Cluster: PREDICTED: similar to CG10173-PA; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to CG10173-PA - Nasonia vitripennis
445 NV021850
747bp
unknown/Bm_scaf791
9086bp
UniRef50_Q6CQE6 (54%/82)
Cluster: Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of Kluyveromyces lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of Kluyveromyces lactis - Kluyveromyces lactis (Yeast) (Candida sphaerica)
GO:0016491 F oxidoreductase activity
GO:0050381 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
446 NV021851
667bp
chromo21/Bm_scaf7
8313734bp
UniRef50_UPI00006CFD8F (97%/85)
Cluster: Ubiquitin family protein; n=1; Tetrahymena thermophila SB210|Rep: Ubiquitin family protein - Tetrahymena thermophila SB210
447 NV021852X
639bp
chromo9/Bm_scaf14
6760189bp
UniRef50_P11142 (73%/88)
Cluster: Heat shock cognate 71 kDa protein; n=239; Eukaryota|Rep: Heat shock cognate 71 kDa protein - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0006950 P response to stress
GO:0006986 P response to unfolded protein
GO:0009986 C cell surface
GO:0042623 F ATP hydrolysis activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0006402 P mRNA catabolic process
GO:0006916 P negative regulation of apoptotic process
GO:0051082 F unfolded protein binding
448 NV021853
786bp
chromo13/Bm_scaf1
16203812bp
UniRef50_P40616 (87%/89)
Cluster: ADP-ribosylation factor-like protein 1; n=48; Eukaryota|Rep: ADP-ribosylation factor-like protein 1 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0007264 P small GTPase mediated signal transduction
GO:0008047 F enzyme activator activity
449 NV021854
836bp
chromo11/Bm_scaf24
5118123bp
UniRef50_Q17MF2 (78%/42)
Cluster: Heat shock protein, putative; n=3; Eukaryota|Rep: Heat shock protein, putative - Aedes aegypti (Yellowfever mosquito)
GO:0005524 F ATP binding
GO:0006457 P protein folding
GO:0006950 P response to stress
GO:0005739 C mitochondrion
GO:0051087 F chaperone binding
450 NV021855
785bp
chromo16/Bm_scaf4
9119588bp
UniRef50_P53675 (68%/173)
Cluster: Clathrin heavy chain 2; n=87; Eukaryota|Rep: Clathrin heavy chain 2 - Homo sapiens (Human)
GO:0004871 F obsolete signal transducer activity
GO:0005198 F structural molecule activity
GO:0005488 F binding
GO:0005515 F protein binding
GO:0005905 C clathrin-coated pit
GO:0006461 P protein-containing complex assembly
GO:0006886 P intracellular protein transport
GO:0006898 P receptor-mediated endocytosis
GO:0008565 F obsolete protein transporter activity
GO:0009653 P anatomical structure morphogenesis
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030130 C clathrin coat of trans-Golgi network vesicle
GO:0030132 C clathrin coat of coated pit
GO:0031410 C cytoplasmic vesicle
GO:0005739 C mitochondrion
GO:0030117 C membrane coat
GO:0030118 C clathrin coat
previous next from show/558

- SilkBase 1999-2023 -