SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Search

previous next from show/757
No. Name
Length
 Cromosome No./Scaffold Id
Scaffold Length		 BLAST (UniRef) Gene ontology BLAST (Orthologs)
e_value:>10.0>0.0001>1e-10<=1e-10
571 N---0885
584bp
chromo11/Bm_scaf16
6248677bp
UniRef50_O65729 (64%/90)
Cluster: 60S ribosomal protein L18; n=17; Eukaryota|Rep: 60S ribosomal protein L18 - Cicer arietinum (Chickpea) (Garbanzo)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005842 C cytosolic large ribosomal subunit
572 N---0886
635bp
chromo11/Bm_scaf35
4373199bp
UniRef50_Q5MGK5 (80%/88)
Cluster: Ribosomal protein 23; n=2; Endopterygota|Rep: Ribosomal protein 23 - Lonomia obliqua (Moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0005811 C lipid droplet
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005842 C cytosolic large ribosomal subunit
573 N---0887
425bp
chromo13/Bm_scaf1
16203812bp
UniRef50_Q9GP16 (77%/49)
Cluster: 60S ribosomal protein L31; n=27; Coelomata|Rep: 60S ribosomal protein L31 - Heliothis virescens (Noctuid moth) (Owlet moth)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
574 N---0890
535bp
unknown/
0bp
UniRef50_Q6AW71 (97%/47)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
575 N---0891
688bp
chromo23/Bm_scaf12
6701349bp
UniRef50_UPI0000DB7A1E (62%/70)
Cluster: PREDICTED: similar to CG2093-PA; n=1; Apis mellifera|Rep: PREDICTED: similar to CG2093-PA - Apis mellifera
GO:0005507 F copper ion binding
576 N---0892
671bp
chromo13/Bm_scaf1
16203812bp
UniRef50_UPI0000514BBB (55%/45)
Cluster: PREDICTED: similar to CG5969-PA; n=2; Apocrita|Rep: PREDICTED: similar to CG5969-PA - Apis mellifera
GO:0005515 F protein binding
GO:0006118 P obsolete electron transport
577 N---0893
692bp
chromo17/Bm_scaf33
4426693bp
UniRef50_A7QIM7 (42%/38)
Cluster: Chromosome chr9 scaffold_104, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_104, whole genome shotgun sequence - Vitis vinifera (Grape)
GO:0007275 P multicellular organism development
578 N---0895
759bp
unknown/
0bp
UniRef50_Q6AW70 (98%/84)
Cluster: Coat protein; n=1; Bombyx mori Macula-like latent virus|Rep: Coat protein - Bombyx mori Macula-like latent virus
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
579 N---0896
736bp
unknown/
0bp
UniRef50_Q6AW71 (100%/46)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
580 N---0897
701bp
chromo16/Bm_scaf4
9119588bp
UniRef50_Q7QD52 (47%/57)
Cluster: ENSANGP00000010910; n=2; Culicidae|Rep: ENSANGP00000010910 - Anopheles gambiae str. PEST
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
581 N---0899
683bp
unknown/
0bp
UniRef50_Q6AW71 (71%/138)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
582 N---0900
307bp
chromo17/Bm_scaf21
5628829bp
UniRef50_Q5DCV8 (47%/85)
Cluster: SJCHGC02419 protein; n=1; Schistosoma japonicum|Rep: SJCHGC02419 protein - Schistosoma japonicum (Blood fluke)
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0003723 F RNA binding
GO:0005842 C cytosolic large ribosomal subunit
GO:0008201 F heparin binding
GO:0030529 C ribonucleoprotein complex
GO:0005515 F protein binding
GO:0005811 C lipid droplet
583 N---0901
590bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q05639 (50%/200)
Cluster: Elongation factor 1-alpha 2; n=8397; root|Rep: Elongation factor 1-alpha 2 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
584 N---0902
625bp
unknown/
0bp
UniRef50_Q6AW71 (97%/46)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
585 N---0903
647bp
chromo26/Bm_scaf25
4930657bp
UniRef50_Q6LEZ3 (38%/39)
Cluster: Plasmodium falciparum chromosome 6, complete sequence; segment 4/5; n=18; root|Rep: Plasmodium falciparum chromosome 6, complete sequence; segment 4/5 - Plasmodium falciparum (isolate 3D7)
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0006464 P cellular protein modification process
GO:0006512 P obsolete ubiquitin cycle
586 N---0904
457bp
chromo17/Bm_scaf33
4426693bp
UniRef50_Q961V7 (37%/150)
Cluster: GH03753p; n=5; melanogaster subgroup|Rep: GH03753p - Drosophila melanogaster (Fruit fly)
GO:0003723 F RNA binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0004519 F endonuclease activity
587 N---0905
756bp
chromo14/Bm_scaf38
4008358bp
UniRef50_Q7QIP2 (31%/155)
Cluster: ENSANGP00000007677; n=1; Anopheles gambiae str. PEST|Rep: ENSANGP00000007677 - Anopheles gambiae str. PEST
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0008270 F zinc ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006350 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
588 N---0906
595bp
unknown/Bm_scaf3629_contig48828
1165bp
(no hit)
589 N---0907
508bp
unknown/
0bp
UniRef50_Q6AW71 (93%/96)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
590 N---0908
701bp
chromo10/Bm_scaf10
7317751bp
UniRef50_A5E6E2 (42%/33)
Cluster: Putative uncharacterized protein; n=2; Saccharomycetales|Rep: Putative uncharacterized protein - Lodderomyces elongisporus (Yeast) (Saccharomyces elongisporus)
GO:0006506 P GPI anchor biosynthetic process
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0017176 F phosphatidylinositol N-acetylglucosaminyltransferase activity
591 N---0909
654bp
chromo5/Bm_scaf9
8107424bp
UniRef50_UPI00005A4635 (94%/85)
Cluster: PREDICTED: similar to statin-like; n=2; Canis lupus familiaris|Rep: PREDICTED: similar to statin-like - Canis familiaris
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
592 N---0910
645bp
chromo5/Bm_scaf9
8107424bp
UniRef50_Q05639 (71%/97)
Cluster: Elongation factor 1-alpha 2; n=8397; root|Rep: Elongation factor 1-alpha 2 - Homo sapiens (Human)
GO:0000166 F nucleotide binding
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005853 C eukaryotic translation elongation factor 1 complex
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0006916 P negative regulation of apoptotic process
GO:0008135 F translation factor activity, RNA binding
593 N---0911
694bp
unknown/
0bp
UniRef50_Q6AW71 (95%/47)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
594 N---0912
662bp
unknown/
0bp
UniRef50_Q6AW71 (70%/138)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
GO:0005198 F structural molecule activity
GO:0019028 C viral capsid
595 N---0915
588bp
unknown/
0bp
UniRef50_Q6AW71 (100%/46)
Cluster: RNA-dependent RNA polymerase; n=1; Bombyx mori Macula-like latent virus|Rep: RNA-dependent RNA polymerase - Bombyx mori Macula-like latent virus
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003968 F RNA-directed 5'-3' RNA polymerase activity
GO:0005524 F ATP binding
GO:0006350 P transcription, DNA-templated
GO:0006410 P obsolete transcription, RNA-dependent
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019079 P viral genome replication
596 N---0916
610bp
chromo23/Bm_scaf95
1426125bp
UniRef50_O75306 (84%/84)
Cluster: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial precursor; n=305; cellular organisms|Rep: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial precursor - Homo sapiens (Human)
GO:0003954 F NADH dehydrogenase activity
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006118 P obsolete electron transport
GO:0006120 P mitochondrial electron transport, NADH to ubiquinone
GO:0006979 P response to oxidative stress
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0046872 F metal ion binding
GO:0051287 F NAD binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
597 N---0917
591bp
chromo2/Bm_scaf118
704489bp
UniRef50_A5DI25 (28%/63)
Cluster: Putative uncharacterized protein; n=1; Pichia guilliermondii|Rep: Putative uncharacterized protein - Pichia guilliermondii (Yeast) (Candida guilliermondii)
GO:0004671 F protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
GO:0006481 P C-terminal protein methylation
GO:0016021 C integral component of membrane
598 N---0918
679bp
chromo18/Bm_scaf2
11281751bp
UniRef50_Q9Y5K8 (71%/85)
Cluster: Vacuolar ATP synthase subunit D; n=81; Eukaryota|Rep: Vacuolar ATP synthase subunit D - Homo sapiens (Human)
GO:0006754 P ATP biosynthetic process
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015992 P proton transmembrane transport
GO:0016469 C proton-transporting two-sector ATPase complex
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0046933 F proton-transporting ATP synthase activity, rotational mechanism
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
GO:0000221 C vacuolar proton-transporting V-type ATPase, V1 domain
GO:0000329 C fungal-type vacuole membrane
GO:0005515 F protein binding
GO:0007035 P vacuolar acidification
599 N---0919
667bp
chromo20/Bm_scaf96
1469819bp
UniRef50_P52275 (95%/84)
Cluster: Tubulin beta-2 chain; n=115; Bilateria|Rep: Tubulin beta-2 chain - Caenorhabditis elegans
GO:0000166 F nucleotide binding
GO:0000212 P meiotic spindle organization
GO:0002119 P nematode larval development
GO:0003924 F GTPase activity
GO:0005198 F structural molecule activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0008150 P biological_process
GO:0009792 P embryo development ending in birth or egg hatching
GO:0035046 P pronuclear migration
GO:0040016 P embryonic cleavage
GO:0043234 C protein-containing complex
GO:0051258 P protein polymerization
GO:0005200 F structural constituent of cytoskeleton
GO:0005856 C cytoskeleton
GO:0005929 C cilium
600 N---0920
654bp
chromo11/Bm_scaf59
2341090bp
UniRef50_Q8I397 (26%/126)
Cluster: Mitochondrial carrier protein, putative; n=2; Plasmodium|Rep: Mitochondrial carrier protein, putative - Plasmodium falciparum (isolate 3D7)
GO:0005488 F binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0015074 P DNA integration
previous next from show/757

- SilkBase 1999-2023 -